RNA–Protein interactions for RNA: ENST00000363858.1

RNU6-271P-201, Transcript of RNA, U6 small nuclear 271, pseudogene, humanhuman

BASIC

Gene RNU6-271P, Length 105 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-271P-201ENST00000363858 H7BZZ5 65 aa0.56□□□□□ -2.32
RNU6-271P-201ENST00000363858 HMGN3Q15651 99 aa0.56□□□□□ -2.32
RNU6-271P-201ENST00000363858 UBE2DNLQ8IWF7 75 aa0.56□□□□□ -2.32
RNU6-271P-201ENST00000363858 PROK2Q9HC23 129 aa0.56□□□□□ -2.32
RNU6-271P-201ENST00000363858 PSME4Q14997 1843 aa0.56□□□□□ -2.32
RNU6-271P-201ENST00000363858 FLG2Q5D862 2391 aaPredicted RBP0.56□□□□□ -2.32
RNU6-271P-201ENST00000363858 KMT2BQ9UMN6 2715 aaPredicted RBP0.56□□□□□ -2.32
RNU6-271P-201ENST00000363858 POLA1P09884 1462 aaPredicted RBP0.55□□□□□ -2.32
RNU6-271P-201ENST00000363858 LRRC9Q6ZRR7 1453 aa0.55□□□□□ -2.32
RNU6-271P-201ENST00000363858 PPLO60437 1756 aa0.55□□□□□ -2.32
RNU6-271P-201ENST00000363858 ZDBF2Q9HCK1 2354 aa0.55□□□□□ -2.32
RNU6-271P-201ENST00000363858 SPTBP11277 2137 aa0.55□□□□□ -2.32
RNU6-271P-201ENST00000363858 KDM5DQ9BY66 1539 aa0.55□□□□□ -2.32
RNU6-271P-201ENST00000363858 KANTRA0A1W2PQU2 76 aa0.55□□□□□ -2.32
RNU6-271P-201ENST00000363858 M0R3E3 92 aa0.55□□□□□ -2.32
RNU6-271P-201ENST00000363858 SNRPFP62306 86 aaKnown RBP0.55□□□□□ -2.32
RNU6-271P-201ENST00000363858 HAMPP81172 84 aa0.55□□□□□ -2.32
RNU6-271P-201ENST00000363858 ADIRFQ15847 76 aa0.55□□□□□ -2.32
RNU6-271P-201ENST00000363858 Q6JHZ5 121 aa0.55□□□□□ -2.32
RNU6-271P-201ENST00000363858 FDCSPQ8NFU4 85 aa0.55□□□□□ -2.32
RNU6-271P-201ENST00000363858 C20orf78Q9BR46 151 aa0.55□□□□□ -2.32
RNU6-271P-201ENST00000363858 RGPD3A6NKT7 1758 aaPredicted RBP0.55□□□□□ -2.32
RNU6-271P-201ENST00000363858 JMJD1CQ15652 2540 aa0.55□□□□□ -2.32
RNU6-271P-201ENST00000363858 NRXN1Q9ULB1 1477 aa0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 CUX1P39880 1505 aa0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 SSC5DA1L4H1 1573 aa0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 ERCC6L2Q5T890 1561 aa0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 A0A087WVE0 104 aa0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 C7orf77A4D0Y5 90 aa0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 F8WEM9 126 aa0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 G3V318 75 aa0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 HMGN2P05204 90 aaKnown RBP0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 ACYP1P07311 99 aa0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 NMBP08949 121 aa0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 GNGT1P63211 74 aa0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 ALKAL2Q6UX46 152 aa0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 TMEM263Q8WUH6 116 aaKnown RBP0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 LINC00846Q9NV44 126 aa0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 SPCS1Q9Y6A9 102 aa0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 XRN1Q8IZH2 1706 aaKnown RBP0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 F5P12259 2224 aa0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 ERVK-7P63135 1459 aa0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 C1orf167Q5SNV9 1468 aa0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 RP1L1Q8IWN7 2480 aaPredicted RBP0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 MAP3K1Q13233 1512 aa0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 KCPQ6ZWJ8 1503 aa0.54□□□□□ -2.32
RNU6-271P-201ENST00000363858 KNTC1P50748 2209 aa0.53□□□□□ -2.32
RNU6-271P-201ENST00000363858 COL4A6Q14031 1691 aa0.53□□□□□ -2.32
RNU6-271P-201ENST00000363858 ABCA1O95477 2261 aa0.53□□□□□ -2.32
RNU6-271P-201ENST00000363858 ROS1P08922 2347 aa0.53□□□□□ -2.32
RNU6-271P-201ENST00000363858 NAV3Q8IVL0 2385 aa0.53□□□□□ -2.32
RNU6-271P-201ENST00000363858 BTAF1O14981 1849 aa0.53□□□□□ -2.32
RNU6-271P-201ENST00000363858 PDCD11Q14690 1871 aaKnown RBP0.53□□□□□ -2.32
RNU6-271P-201ENST00000363858 D6R8Y8 96 aa0.53□□□□□ -2.32
RNU6-271P-201ENST00000363858 H0Y9P7 68 aa0.53□□□□□ -2.32
RNU6-271P-201ENST00000363858 LEPROTL1O95214 131 aa0.53□□□□□ -2.32
RNU6-271P-201ENST00000363858 ARMS2P0C7Q2 107 aa0.53□□□□□ -2.32
RNU6-271P-201ENST00000363858 C10orf113Q5VZT2 155 aa0.53□□□□□ -2.32
RNU6-271P-201ENST00000363858 LINC00643Q86TS7 51 aa0.53□□□□□ -2.32
RNU6-271P-201ENST00000363858 MUSTN1Q8IVN3 82 aa0.53□□□□□ -2.32
RNU6-271P-201ENST00000363858 LINC01600Q96MT4 127 aa0.53□□□□□ -2.32
RNU6-271P-201ENST00000363858 C10orf95Q9H7T3 257 aa0.53□□□□□ -2.32
RNU6-271P-201ENST00000363858 ST20Q9HBF5 79 aa0.53□□□□□ -2.32
RNU6-271P-201ENST00000363858 CCDC141Q6ZP82 1450 aa0.53□□□□□ -2.33
RNU6-271P-201ENST00000363858 MED13LQ71F56 2210 aa0.53□□□□□ -2.33
RNU6-271P-201ENST00000363858 COL6A6A6NMZ7 2263 aa0.53□□□□□ -2.33
RNU6-271P-201ENST00000363858 ABCC1P33527 1531 aa0.53□□□□□ -2.33
RNU6-271P-201ENST00000363858 CFAP74Q9C0B2 1584 aa0.53□□□□□ -2.33
RNU6-271P-201ENST00000363858 C5P01031 1676 aa0.53□□□□□ -2.33
RNU6-271P-201ENST00000363858 SHPRHQ149N8 1683 aa0.53□□□□□ -2.33
RNU6-271P-201ENST00000363858 A0A0D9SFI3 127 aa0.52□□□□□ -2.33
RNU6-271P-201ENST00000363858 COX6A2Q02221 97 aa0.52□□□□□ -2.33
RNU6-271P-201ENST00000363858 PLGLAQ15195 96 aa0.52□□□□□ -2.33
RNU6-271P-201ENST00000363858 NMSQ5H8A3 153 aa0.52□□□□□ -2.33
RNU6-271P-201ENST00000363858 C6orf201Q7Z4U5 140 aa0.52□□□□□ -2.33
RNU6-271P-201ENST00000363858 SPRR4Q96PI1 79 aa0.52□□□□□ -2.33
RNU6-271P-201ENST00000363858 HIGD1BQ9P298 99 aa0.52□□□□□ -2.33
RNU6-271P-201ENST00000363858 ASH1LQ9NR48 2969 aaKnown RBP0.52□□□□□ -2.33
RNU6-271P-201ENST00000363858 DIP2BQ9P265 1576 aa0.52□□□□□ -2.33
RNU6-271P-201ENST00000363858 LRP6O75581 1613 aa0.52□□□□□ -2.33
RNU6-271P-201ENST00000363858 TARBP1Q13395 1621 aaKnown RBP0.52□□□□□ -2.33
RNU6-271P-201ENST00000363858 ALKQ9UM73 1620 aa0.52□□□□□ -2.33
RNU6-271P-201ENST00000363858 A0A0G2JMZ2 1700 aa0.52□□□□□ -2.33
RNU6-271P-201ENST00000363858 KDM3BQ7LBC6 1761 aa0.52□□□□□ -2.33
RNU6-271P-201ENST00000363858 LAMA4Q16363 1823 aa0.52□□□□□ -2.33
RNU6-271P-201ENST00000363858 TENM1Q9UKZ4 2725 aa0.51□□□□□ -2.33
RNU6-271P-201ENST00000363858 MYMXA0A1B0GTQ4 84 aa0.51□□□□□ -2.33
RNU6-271P-201ENST00000363858 A0A1B0GU69 56 aa0.51□□□□□ -2.33
RNU6-271P-201ENST00000363858 NKTRP30414 1462 aaKnown RBP0.51□□□□□ -2.33
RNU6-271P-201ENST00000363858 NCOA6Q14686 2063 aaPredicted RBP0.51□□□□□ -2.33
RNU6-271P-201ENST00000363858 ATP5EP2Q5VTU8 51 aa0.51□□□□□ -2.33
RNU6-271P-201ENST00000363858 KNDC1Q76NI1 1749 aa0.51□□□□□ -2.33
RNU6-271P-201ENST00000363858 DEFB107AQ8IZN7 70 aa0.51□□□□□ -2.33
RNU6-271P-201ENST00000363858 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.51□□□□□ -2.33
RNU6-271P-201ENST00000363858 CNFNQ9BYD5 112 aa0.51□□□□□ -2.33
RNU6-271P-201ENST00000363858 PTPN23Q9H3S7 1636 aa0.51□□□□□ -2.33
RNU6-271P-201ENST00000363858 LINC00472Q9H8W2 130 aa0.51□□□□□ -2.33
RNU6-271P-201ENST00000363858 PSENENQ9NZ42 101 aa0.51□□□□□ -2.33
RNU6-271P-201ENST00000363858 ZNF236Q9UL36 1845 aa0.51□□□□□ -2.33
RNU6-271P-201ENST00000363858 UBE2D4Q9Y2X8 147 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms