RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 NKAIN1Q4KMZ8 207 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 GCSAMLQ5JQS6 135 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 HIST2H2BFQ5QNW6 126 aaPredicted RBP-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 CLVS2Q5SYC1 327 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 CFAP58Q5T655 872 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 LINC01590Q5TEZ4 76 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 NUDCD3Q8IVD9 361 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 HIST1H2BHQ93079 126 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 SGTBQ96EQ0 304 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 SCLT1Q96NL6 688 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 HIST1H2BNQ99877 126 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 HIST1H2BMQ99879 126 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 OR51M1Q9H341 326 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 SDHAF2Q9NX18 166 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 PRNDQ9UKY0 176 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 TPRKBQ9Y3C4 175 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 EIF2AK4Q9P2K8 1649 aaKnown RBP-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 TIAM1Q13009 1591 aa-2.58□□□□□ -2.82
RNU6-228P-201ENST00000362700 DDX60Q8IY21 1712 aaKnown RBP-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 MYO5CQ9NQX4 1742 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 ABCA9Q8IUA7 1624 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 A0A1B0GX78 115 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 H0Y9P7 68 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 PSMD11O00231 422 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 MRASO14807 208 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 SNAP29O95721 258 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 TRACP01848 142 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 TCRAP04437 139 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 TSPAN19P0C672 248 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 S100A4P26447 101 aaKnown RBP-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 GUK1Q16774 197 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 PIP5KL1Q5T9C9 394 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 SAMD13Q5VXD3 122 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 MRPL54Q6P161 138 aaKnown RBP-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 WFDC10BQ8IUB3 73 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 TCTE3Q8IZS6 198 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 CLHC1Q8NHS4 586 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 DYNLRB2Q8TF09 96 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 MRAP2Q96G30 205 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 NIPSNAP3BQ9BS92 247 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 SMIM2Q9BVW6 85 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 C1orf21Q9H246 121 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 CTNNBIP1Q9NSA3 81 aaPredicted RBP-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 ATPIF1Q9UII2 106 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 LINC00312Q9Y6C7 94 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 SAMD9Q5K651 1589 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 NCAPD3P42695 1498 aa-2.59□□□□□ -2.82
RNU6-228P-201ENST00000362700 SYNJ2BP-COX16A0A087WUM0 186 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 A0A1B0GWA3 101 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 SMIM27A0A1W2PRY6 76 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 A6NIN4 97 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 SMKR1H3BMG3 65 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 J3QRK9 145 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 TRGC2P03986 189 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 SLC25A5P05141 298 aaKnown RBP-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 IL3P08700 152 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 HMGB1P09429 215 aaKnown RBP-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 APELAP0DMC3 54 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 UCHL3P15374 230 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 AP1S2P56377 157 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 DEFB131AP59861 70 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 TAF7Q15545 349 aaPredicted RBP-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 C6orf226Q5I0X4 101 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 CCDC91Q7Z6B0 441 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 SLC35F2Q8IXU6 374 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 FAM133AQ8N9E0 248 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 EFHD2Q96C19 240 aaPredicted RBP-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 ATP6V1G3Q96LB4 118 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 C20orf78Q9BR46 151 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 COA1Q9GZY4 146 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 NACA2Q9H009 215 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 NXT2Q9NPJ8 142 aaKnown RBP-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 TMEM216Q9P0N5 145 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 AK6Q9Y3D8 172 aaKnown RBP-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 LTN1O94822 1766 aa-2.6□□□□□ -2.83
RNU6-228P-201ENST00000362700 TRBV19A0A075B6N1 114 aa-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 LOC285095A0A1B0GVY8 99 aa-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 D6R8Y8 96 aa-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 CCDC179H3BU77 68 aa-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 ENSAO43768 121 aaKnown RBP-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 MRPL33O75394 65 aaKnown RBP-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 GOSR1O95249 250 aa-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 RBP4P02753 201 aa-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 ORM1P02763 201 aa-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 COX5BP10606 129 aa-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 RAB5AP20339 215 aa-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 UBE2KP61086 200 aa-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 UBE2G1P62253 170 aa-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 HPCAP84074 193 aa-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 MED21Q13503 144 aa-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 CXorf40BQ96DE9 158 aa-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 MPHOSPH6Q99547 160 aaKnown RBP-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 CCL13Q99616 98 aa-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 MAP1LC3AQ9H492 121 aa-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 POLE4Q9NR33 117 aa-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 RPRMQ9NS64 109 aa-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 ABCA5Q8WWZ7 1642 aa-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 NRKQ7Z2Y5 1582 aa-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 RB1CC1Q8TDY2 1594 aa-2.61□□□□□ -2.83
RNU6-228P-201ENST00000362700 A0A0B4J2E0 115 aa-2.62□□□□□ -2.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms