RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 SPANXCQ9NY87 97 aa11.82□□□□□ -0.52
VPS13B-201ENST00000355155 IGHV3-30P01768 117 aa11.82□□□□□ -0.52
VPS13B-201ENST00000355155 IGHV3-30-5P0DP03 117 aa11.82□□□□□ -0.52
VPS13B-201ENST00000355155 HIST1H4GQ99525 98 aa11.82□□□□□ -0.52
VPS13B-201ENST00000355155 A0A087WZ39 114 aa11.82□□□□□ -0.52
VPS13B-201ENST00000355155 TRAV13-1A0A0B4J241 112 aa11.82□□□□□ -0.52
VPS13B-201ENST00000355155 SCGB1D4Q6XE38 83 aa11.82□□□□□ -0.52
VPS13B-201ENST00000355155 Q6ZTC4 211 aa11.82□□□□□ -0.52
VPS13B-201ENST00000355155 LYPD5Q6UWN5 251 aa11.81□□□□□ -0.52
VPS13B-201ENST00000355155 GCSHP23434 173 aa11.81□□□□□ -0.52
VPS13B-201ENST00000355155 NDUFA12Q9UI09 145 aa11.81□□□□□ -0.52
VPS13B-201ENST00000355155 C11orf45Q8TAV5 145 aa11.8□□□□□ -0.52
VPS13B-201ENST00000355155 STAB1Q9NY15 2570 aa11.79□□□□□ -0.52
VPS13B-201ENST00000355155 TMEM238C9JI98 176 aa11.79□□□□□ -0.52
VPS13B-201ENST00000355155 ZNF625Q96I27 306 aaPredicted RBP11.79□□□□□ -0.52
VPS13B-201ENST00000355155 HUWE1Q7Z6Z7 4374 aaKnown RBP11.79□□□□□ -0.52
VPS13B-201ENST00000355155 C9orf118A6NHY6 69 aa11.79□□□□□ -0.52
VPS13B-201ENST00000355155 PTTG1IPP53801 180 aa11.79□□□□□ -0.52
VPS13B-201ENST00000355155 PRR34Q9NV39 138 aa11.79□□□□□ -0.52
VPS13B-201ENST00000355155 SMIM13P0DJ93 91 aa11.78□□□□□ -0.52
VPS13B-201ENST00000355155 TMEM238LA0A1B0GVL6 79 aa11.78□□□□□ -0.52
VPS13B-201ENST00000355155 A6NJY4 79 aa11.78□□□□□ -0.52
VPS13B-201ENST00000355155 HERV-K104P63124 156 aa11.78□□□□□ -0.52
VPS13B-201ENST00000355155 IGHV3-64A0A075B6Q5 118 aa11.77□□□□□ -0.53
VPS13B-201ENST00000355155 SS18Q15532 418 aa11.77□□□□□ -0.53
VPS13B-201ENST00000355155 SFTA2Q6UW10 78 aa11.77□□□□□ -0.53
VPS13B-201ENST00000355155 HTN3P15516 51 aa11.77□□□□□ -0.53
VPS13B-201ENST00000355155 TRAV10A0A0B4J240 114 aa11.75□□□□□ -0.53
VPS13B-201ENST00000355155 TMEM262E9PQX1 116 aa11.75□□□□□ -0.53
VPS13B-201ENST00000355155 PKD1L1Q8TDX9 2849 aa11.75□□□□□ -0.53
VPS13B-201ENST00000355155 NANOS2P60321 138 aaKnown RBP11.75□□□□□ -0.53
VPS13B-201ENST00000355155 DEFB131BA0A096LNP1 70 aa11.74□□□□□ -0.53
VPS13B-201ENST00000355155 K7EP13 123 aa11.74□□□□□ -0.53
VPS13B-201ENST00000355155 IFITM1P13164 125 aa11.74□□□□□ -0.53
VPS13B-201ENST00000355155 SRSF9Q13242 221 aaKnown RBP eCLIP11.74□□□□□ -0.53
VPS13B-201ENST00000355155 CD164L2Q6UWJ8 174 aa11.74□□□□□ -0.53
VPS13B-201ENST00000355155 MIAQ16674 131 aa11.73□□□□□ -0.53
VPS13B-201ENST00000355155 C15orf53Q8NAA6 179 aa11.73□□□□□ -0.53
VPS13B-201ENST00000355155 COX7B2Q8TF08 81 aa11.73□□□□□ -0.53
VPS13B-201ENST00000355155 REG3AQ06141 175 aa11.72□□□□□ -0.53
VPS13B-201ENST00000355155 KRTAP21-3Q3LHN1 58 aa11.72□□□□□ -0.53
VPS13B-201ENST00000355155 B9D2Q9BPU9 175 aa11.72□□□□□ -0.53
VPS13B-201ENST00000355155 NHP2Q9NX24 153 aaKnown RBP11.72□□□□□ -0.53
VPS13B-201ENST00000355155 PRB2P02812 416 aaPredicted RBP11.71□□□□□ -0.54
VPS13B-201ENST00000355155 RPL24P83731 157 aaKnown RBP11.71□□□□□ -0.54
VPS13B-201ENST00000355155 LINC00269Q8N2A0 174 aa11.71□□□□□ -0.54
VPS13B-201ENST00000355155 A0A0B4J2C4 111 aa11.7□□□□□ -0.54
VPS13B-201ENST00000355155 Q8IZM0 81 aa11.7□□□□□ -0.54
VPS13B-201ENST00000355155 Q9H8V8 135 aa11.7□□□□□ -0.54
VPS13B-201ENST00000355155 NBEAL2Q6ZNJ1 2754 aa11.7□□□□□ -0.54
VPS13B-201ENST00000355155 ADAMTSL4-AS1Q5T5F5 129 aa11.69□□□□□ -0.54
VPS13B-201ENST00000355155 FOXI1Q12951 378 aa11.69□□□□□ -0.54
VPS13B-201ENST00000355155 UBE2V1Q13404 147 aa11.69□□□□□ -0.54
VPS13B-201ENST00000355155 TRAV8-4A0A0B4J246 113 aa11.68□□□□□ -0.54
VPS13B-201ENST00000355155 IGLL5B9A064 214 aa11.68□□□□□ -0.54
VPS13B-201ENST00000355155 ESRGQ1W209 222 aa11.68□□□□□ -0.54
VPS13B-201ENST00000355155 MUSTN1Q8IVN3 82 aa11.68□□□□□ -0.54
VPS13B-201ENST00000355155 COL6A5A8TX70 2615 aa11.68□□□□□ -0.54
VPS13B-201ENST00000355155 ANGP03950 147 aaKnown RBP11.68□□□□□ -0.54
VPS13B-201ENST00000355155 CIRBPQ14011 172 aaKnown RBP11.68□□□□□ -0.54
VPS13B-201ENST00000355155 DEFB121Q5J5C9 76 aa11.68□□□□□ -0.54
VPS13B-201ENST00000355155 DNAH9Q9NYC9 4486 aa11.68□□□□□ -0.54
VPS13B-201ENST00000355155 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.68□□□□□ -0.54
VPS13B-201ENST00000355155 A0A1W2PPM0 123 aa11.68□□□□□ -0.54
VPS13B-201ENST00000355155 CFC1BP0CG36 223 aa11.68□□□□□ -0.54
VPS13B-201ENST00000355155 CFC1P0CG37 223 aa11.68□□□□□ -0.54
VPS13B-201ENST00000355155 CHCHD10Q8WYQ3 142 aaPredicted RBP11.68□□□□□ -0.54
VPS13B-201ENST00000355155 DYNC2H1Q8NCM8 4307 aaKnown RBP11.67□□□□□ -0.54
VPS13B-201ENST00000355155 LINC01556Q5JQF7 62 aa11.67□□□□□ -0.54
VPS13B-201ENST00000355155 ENHOQ6UWT2 76 aa11.67□□□□□ -0.54
VPS13B-201ENST00000355155 COPS9Q8WXC6 57 aa11.67□□□□□ -0.54
VPS13B-201ENST00000355155 Q8N3U1 123 aa11.67□□□□□ -0.54
VPS13B-201ENST00000355155 K7ERJ3 54 aa11.66□□□□□ -0.54
VPS13B-201ENST00000355155 KIAA0087Q14695 138 aa11.65□□□□□ -0.54
VPS13B-201ENST00000355155 KLK5Q9Y337 293 aaPredicted RBP11.65□□□□□ -0.54
VPS13B-201ENST00000355155 EIF4EBP3O60516 100 aaPredicted RBP11.65□□□□□ -0.54
VPS13B-201ENST00000355155 CXCL5P42830 114 aa11.65□□□□□ -0.54
VPS13B-201ENST00000355155 A4D1N5 150 aa11.64□□□□□ -0.55
VPS13B-201ENST00000355155 IBA57-AS1B1ANH7 110 aa11.64□□□□□ -0.55
VPS13B-201ENST00000355155 COX7A2LO14548 114 aa11.64□□□□□ -0.55
VPS13B-201ENST00000355155 DNAH10OSP0CZ25 163 aa11.64□□□□□ -0.55
VPS13B-201ENST00000355155 H3BUT2 72 aa11.64□□□□□ -0.55
VPS13B-201ENST00000355155 XCL1P47992 114 aa11.64□□□□□ -0.55
VPS13B-201ENST00000355155 KRTAP26-1Q6PEX3 210 aa11.64□□□□□ -0.55
VPS13B-201ENST00000355155 C5orf38Q86SI9 138 aa11.64□□□□□ -0.55
VPS13B-201ENST00000355155 IGKV3OR2-268A0A0C4DH90 116 aa11.64□□□□□ -0.55
VPS13B-201ENST00000355155 NHLRC4P0CG21 123 aaPredicted RBP11.64□□□□□ -0.55
VPS13B-201ENST00000355155 WFDC10BQ8IUB3 73 aa11.64□□□□□ -0.55
VPS13B-201ENST00000355155 UPK3BQ9BT76 320 aa11.63□□□□□ -0.55
VPS13B-201ENST00000355155 K7EP34 96 aa11.63□□□□□ -0.55
VPS13B-201ENST00000355155 RAB37Q96AX2 223 aa11.62□□□□□ -0.55
VPS13B-201ENST00000355155 MRAPQ8TCY5 172 aa11.62□□□□□ -0.55
VPS13B-201ENST00000355155 LINC00308Q8TCZ7 52 aa11.62□□□□□ -0.55
VPS13B-201ENST00000355155 LOC107984156A0A0G2JMH3 177 aa11.61□□□□□ -0.55
VPS13B-201ENST00000355155 VAMP3Q15836 100 aa11.61□□□□□ -0.55
VPS13B-201ENST00000355155 ARL17AQ8IVW1 177 aa11.61□□□□□ -0.55
VPS13B-201ENST00000355155 PRO1854Q9UHT4 67 aa11.61□□□□□ -0.55
VPS13B-201ENST00000355155 MUC7Q8TAX7 377 aa11.6□□□□□ -0.55
VPS13B-201ENST00000355155 KLK12Q9UKR0 248 aa11.6□□□□□ -0.55
VPS13B-201ENST00000355155 TSPAN13O95857 204 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms