RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 LINC00612Q8N6U2 182 aa15.35■□□□□ 0.05
LIMS2-202ENST00000355119 SIGMAR1Q99720 223 aa15.35■□□□□ 0.05
LIMS2-202ENST00000355119 C9JAW5 83 aa15.34■□□□□ 0.05
LIMS2-202ENST00000355119 SLC25A20O43772 301 aa15.34■□□□□ 0.05
LIMS2-202ENST00000355119 ZNF625Q96I27 306 aaPredicted RBP15.34■□□□□ 0.05
LIMS2-202ENST00000355119 DAND5Q8N907 189 aa15.34■□□□□ 0.05
LIMS2-202ENST00000355119 LINC00308Q8TCZ7 52 aa15.34■□□□□ 0.05
LIMS2-202ENST00000355119 NF1P21359 2839 aa15.33■□□□□ 0.05
LIMS2-202ENST00000355119 COX6CP09669 75 aa15.33■□□□□ 0.04
LIMS2-202ENST00000355119 SMIM9A6NGZ8 99 aa15.33■□□□□ 0.04
LIMS2-202ENST00000355119 PRIMA1Q86XR5 153 aa15.33■□□□□ 0.04
LIMS2-202ENST00000355119 FASNP49327 2511 aaKnown RBP15.32■□□□□ 0.04
LIMS2-202ENST00000355119 ACANP16112 2415 aa15.32■□□□□ 0.04
LIMS2-202ENST00000355119 LINC01620Q4KN68 170 aa15.32■□□□□ 0.04
LIMS2-202ENST00000355119 C9orf66Q5T8R8 295 aa15.32■□□□□ 0.04
LIMS2-202ENST00000355119 ANKRD29Q8N6D5 301 aa15.32■□□□□ 0.04
LIMS2-202ENST00000355119 CARD19Q96LW7 228 aa15.32■□□□□ 0.04
LIMS2-202ENST00000355119 DEFB130BP0DP73 79 aa15.31■□□□□ 0.04
LIMS2-202ENST00000355119 DEFB130AP0DP74 79 aa15.31■□□□□ 0.04
LIMS2-202ENST00000355119 RPL13AP40429 203 aaKnown RBP15.31■□□□□ 0.04
LIMS2-202ENST00000355119 MEIG1Q5JSS6 88 aa15.31■□□□□ 0.04
LIMS2-202ENST00000355119 CHCHD5Q9BSY4 110 aa15.31■□□□□ 0.04
LIMS2-202ENST00000355119 CUBNO60494 3623 aa15.3■□□□□ 0.04
LIMS2-202ENST00000355119 LINC01600Q96MT4 127 aa15.29■□□□□ 0.04
LIMS2-202ENST00000355119 PPDPFQ9H3Y8 114 aa15.29■□□□□ 0.04
LIMS2-202ENST00000355119 X6R8D5 127 aa15.29■□□□□ 0.04
LIMS2-202ENST00000355119 SETXQ7Z333 2677 aaKnown RBP15.27■□□□□ 0.03
LIMS2-202ENST00000355119 IGLV4-60A0A075B6I1 120 aa15.27■□□□□ 0.03
LIMS2-202ENST00000355119 TRBV10-2A0A0K0K1G8 114 aa15.26■□□□□ 0.03
LIMS2-202ENST00000355119 SCGB1A1P11684 91 aa15.26■□□□□ 0.03
LIMS2-202ENST00000355119 COX7B2Q8TF08 81 aa15.26■□□□□ 0.03
LIMS2-202ENST00000355119 A0A0U1RRA0 63 aa15.26■□□□□ 0.03
LIMS2-202ENST00000355119 INAFM1C9JVW0 142 aa15.26■□□□□ 0.03
LIMS2-202ENST00000355119 GYPEP15421 78 aa15.25■□□□□ 0.03
LIMS2-202ENST00000355119 SOSTDC1Q6X4U4 206 aa15.24■□□□□ 0.03
LIMS2-202ENST00000355119 HIVEP2P31629 2446 aa15.23■□□□□ 0.03
LIMS2-202ENST00000355119 UNC79Q9P2D8 2635 aa15.23■□□□□ 0.03
LIMS2-202ENST00000355119 IGKV3OR2-268A0A0C4DH90 116 aa15.23■□□□□ 0.03
LIMS2-202ENST00000355119 ITPR2Q14571 2701 aa15.23■□□□□ 0.03
LIMS2-202ENST00000355119 MTORP42345 2549 aa15.23■□□□□ 0.03
LIMS2-202ENST00000355119 LYRM9A8MSI8 78 aa15.22■□□□□ 0.03
LIMS2-202ENST00000355119 CDIP1Q9H305 208 aa15.22■□□□□ 0.03
LIMS2-202ENST00000355119 PRO0255Q9UI72 69 aa15.22■□□□□ 0.03
LIMS2-202ENST00000355119 IGHV3OR16-9A0A0B4J2B5 98 aa15.21■□□□□ 0.03
LIMS2-202ENST00000355119 LST1O00453 97 aa15.21■□□□□ 0.03
LIMS2-202ENST00000355119 SPATA3Q8NHX4 192 aa15.21■□□□□ 0.02
LIMS2-202ENST00000355119 A0A087WZ39 114 aa15.19■□□□□ 0.02
LIMS2-202ENST00000355119 APOC4P55056 127 aa15.19■□□□□ 0.02
LIMS2-202ENST00000355119 CLEC2BQ92478 149 aa15.19■□□□□ 0.02
LIMS2-202ENST00000355119 NOTCH3Q9UM47 2321 aa15.19■□□□□ 0.02
LIMS2-202ENST00000355119 H3BT86 120 aa15.19■□□□□ 0.02
LIMS2-202ENST00000355119 FAM222AQ5U5X8 452 aa15.19■□□□□ 0.02
LIMS2-202ENST00000355119 TOMM7Q9P0U1 55 aa15.19■□□□□ 0.02
LIMS2-202ENST00000355119 LINC00959A0A1B0GUT2 108 aa15.18■□□□□ 0.02
LIMS2-202ENST00000355119 C2orf82Q6UX34 121 aa15.18■□□□□ 0.02
LIMS2-202ENST00000355119 NTN5Q8WTR8 489 aaPredicted RBP15.18■□□□□ 0.02
LIMS2-202ENST00000355119 JMJD1CQ15652 2540 aa15.18■□□□□ 0.02
LIMS2-202ENST00000355119 SETD2Q9BYW2 2564 aaPredicted RBP15.18■□□□□ 0.02
LIMS2-202ENST00000355119 A0A1B0GUV1 79 aa15.17■□□□□ 0.02
LIMS2-202ENST00000355119 TMEM262E9PQX1 116 aa15.17■□□□□ 0.02
LIMS2-202ENST00000355119 PAX4O43316 350 aa15.16■□□□□ 0.02
LIMS2-202ENST00000355119 SHISA2Q6UWI4 295 aa15.16■□□□□ 0.02
LIMS2-202ENST00000355119 COX7A2LO14548 114 aa15.14■□□□□ 0.01
LIMS2-202ENST00000355119 SS18Q15532 418 aa15.14■□□□□ 0.01
LIMS2-202ENST00000355119 DEFB135Q30KP9 77 aa15.14■□□□□ 0.01
LIMS2-202ENST00000355119 CITED1Q99966 193 aa15.14■□□□□ 0.01
LIMS2-202ENST00000355119 C5orf38Q86SI9 138 aa15.14■□□□□ 0.01
LIMS2-202ENST00000355119 UBE2WQ96B02 151 aa15.14■□□□□ 0.01
LIMS2-202ENST00000355119 MIR7-3HGQ8N6C7 128 aa15.13■□□□□ 0.01
LIMS2-202ENST00000355119 IBA57-AS1B1ANH7 110 aa15.12■□□□□ 0.01
LIMS2-202ENST00000355119 TRAV13-2A0A0B4J235 113 aa15.12■□□□□ 0.01
LIMS2-202ENST00000355119 IGHV4-28A0A0C4DH34 117 aa15.11■□□□□ 0.01
LIMS2-202ENST00000355119 LINC00158P58513 81 aa15.11■□□□□ 0.01
LIMS2-202ENST00000355119 HECTD1Q9ULT8 2610 aa15.11■□□□□ 0.01
LIMS2-202ENST00000355119 NIPBLQ6KC79 2804 aaeCLIP15.11■□□□□ 0.01
LIMS2-202ENST00000355119 LINC01561Q8N1V8 128 aa15.1■□□□□ 0.01
LIMS2-202ENST00000355119 DAD1P61803 113 aa15.09■□□□□ 0.01
LIMS2-202ENST00000355119 A0A096LPF7 62 aa15.09■□□□□ 0.01
LIMS2-202ENST00000355119 TEX49A0A1B0GTD5 131 aa15.09■□□□□ 0.01
LIMS2-202ENST00000355119 SND1-IT1Q9HBX3 110 aa15.09■□□□□ 0.01
LIMS2-202ENST00000355119 CRPP02741 224 aa15.08■□□□□ 0
LIMS2-202ENST00000355119 MIFP14174 115 aa15.08■□□□□ 0
LIMS2-202ENST00000355119 DEFB4AO15263 64 aa15.07■□□□□ 0
LIMS2-202ENST00000355119 XCL1P47992 114 aa15.07■□□□□ 0
LIMS2-202ENST00000355119 XGP55808 180 aa15.07■□□□□ 0
LIMS2-202ENST00000355119 MT-ATP8P03928 68 aa15.06■□□□□ 0
LIMS2-202ENST00000355119 C6orf226Q5I0X4 101 aa15.06■□□□□ 0
LIMS2-202ENST00000355119 Q8NAQ8 132 aa15.05■□□□□ 0
LIMS2-202ENST00000355119 TRAV26-1A0A087WT03 109 aa15.05■□□□□ -0
LIMS2-202ENST00000355119 TRAV8-4A0A0B4J246 113 aa15.05■□□□□ -0
LIMS2-202ENST00000355119 ATP5G1P05496 136 aa15.05■□□□□ -0
LIMS2-202ENST00000355119 Q8IZM0 81 aa15.05■□□□□ -0
LIMS2-202ENST00000355119 WFDC9Q8NEX5 89 aa15.05■□□□□ -0
LIMS2-202ENST00000355119 TRACP01848 142 aa15.04■□□□□ -0
LIMS2-202ENST00000355119 CCL18P55774 89 aa15.04■□□□□ -0
LIMS2-202ENST00000355119 RPL28P46779 137 aaKnown RBP15.04■□□□□ -0
LIMS2-202ENST00000355119 C2CD3Q4AC94 2353 aa15.03■□□□□ -0
LIMS2-202ENST00000355119 IGKV2-28A0A075B6P5 120 aa15.03■□□□□ -0
LIMS2-202ENST00000355119 IGKV2D-28P01615 120 aa15.03■□□□□ -0
LIMS2-202ENST00000355119 DEFB121Q5J5C9 76 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms