RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 IGLV4-3A0A075B6K6 122 aa8.97□□□□□ -0.97
PCDHB11-201ENST00000354757 C9orf153Q5TBE3 101 aa8.97□□□□□ -0.97
PCDHB11-201ENST00000354757 CITED1Q99966 193 aa8.96□□□□□ -0.97
PCDHB11-201ENST00000354757 RS1O15537 224 aa8.96□□□□□ -0.98
PCDHB11-201ENST00000354757 LINC00526Q96FQ7 95 aa8.96□□□□□ -0.98
PCDHB11-201ENST00000354757 UTP20O75691 2785 aaKnown RBP8.96□□□□□ -0.98
PCDHB11-201ENST00000354757 A0A096LNT2 108 aa8.96□□□□□ -0.98
PCDHB11-201ENST00000354757 MUSTN1Q8IVN3 82 aa8.96□□□□□ -0.98
PCDHB11-201ENST00000354757 CAMK2N2Q96S95 79 aa8.96□□□□□ -0.98
PCDHB11-201ENST00000354757 HIGD2BQ4VC39 106 aa8.95□□□□□ -0.98
PCDHB11-201ENST00000354757 CARD19Q96LW7 228 aa8.95□□□□□ -0.98
PCDHB11-201ENST00000354757 C16orf95Q9H693 158 aa8.95□□□□□ -0.98
PCDHB11-201ENST00000354757 TRAV12-1A0A0B4J245 112 aa8.95□□□□□ -0.98
PCDHB11-201ENST00000354757 TRBV27A0A0K0K1C4 114 aa8.95□□□□□ -0.98
PCDHB11-201ENST00000354757 CNFNQ9BYD5 112 aa8.94□□□□□ -0.98
PCDHB11-201ENST00000354757 POLR2KP53803 58 aaKnown RBP8.94□□□□□ -0.98
PCDHB11-201ENST00000354757 RBMY1FQ15415 496 aaKnown RBP8.94□□□□□ -0.98
PCDHB11-201ENST00000354757 ZNF580Q9UK33 172 aa8.94□□□□□ -0.98
PCDHB11-201ENST00000354757 IGHV4-4A0A075B6R2 117 aa8.94□□□□□ -0.98
PCDHB11-201ENST00000354757 SMIM9A6NGZ8 99 aa8.94□□□□□ -0.98
PCDHB11-201ENST00000354757 TSHBP01222 138 aa8.94□□□□□ -0.98
PCDHB11-201ENST00000354757 LINC01620Q4KN68 170 aa8.94□□□□□ -0.98
PCDHB11-201ENST00000354757 LYRM9A8MSI8 78 aa8.94□□□□□ -0.98
PCDHB11-201ENST00000354757 MIFP14174 115 aa8.94□□□□□ -0.98
PCDHB11-201ENST00000354757 TEX49A0A1B0GTD5 131 aa8.93□□□□□ -0.98
PCDHB11-201ENST00000354757 FSHBP01225 129 aa8.93□□□□□ -0.98
PCDHB11-201ENST00000354757 NANOS2P60321 138 aaKnown RBP8.93□□□□□ -0.98
PCDHB11-201ENST00000354757 NBEAL2Q6ZNJ1 2754 aa8.93□□□□□ -0.98
PCDHB11-201ENST00000354757 Q8N2B8 174 aa8.93□□□□□ -0.98
PCDHB11-201ENST00000354757 LAMTOR3Q9UHA4 124 aa8.93□□□□□ -0.98
PCDHB11-201ENST00000354757 TRBV6-8A0A0A6YYG3 113 aa8.93□□□□□ -0.98
PCDHB11-201ENST00000354757 NDUFV3P56181 108 aaKnown RBP8.93□□□□□ -0.98
PCDHB11-201ENST00000354757 COX7B2Q8TF08 81 aa8.93□□□□□ -0.98
PCDHB11-201ENST00000354757 Q6ZSN1 163 aa8.92□□□□□ -0.98
PCDHB11-201ENST00000354757 SMG1Q96Q15 3661 aaKnown RBP8.92□□□□□ -0.98
PCDHB11-201ENST00000354757 SPAG11BQ08648 103 aa8.92□□□□□ -0.98
PCDHB11-201ENST00000354757 NFE4Q86UQ8 179 aa8.92□□□□□ -0.98
PCDHB11-201ENST00000354757 NKAPP1Q8N9T2 125 aa8.92□□□□□ -0.98
PCDHB11-201ENST00000354757 A0A0J9YWU9 116 aa8.91□□□□□ -0.98
PCDHB11-201ENST00000354757 REG3AQ06141 175 aa8.91□□□□□ -0.98
PCDHB11-201ENST00000354757 GAGE2AQ6NT46 116 aa8.91□□□□□ -0.98
PCDHB11-201ENST00000354757 TRBV6-4A0A1B0GX49 114 aa8.91□□□□□ -0.98
PCDHB11-201ENST00000354757 ZNF22P17026 224 aaPredicted RBP8.91□□□□□ -0.98
PCDHB11-201ENST00000354757 RPL18AQ02543 176 aaKnown RBP8.91□□□□□ -0.98
PCDHB11-201ENST00000354757 MIR7-3HGQ8N6C7 128 aa8.91□□□□□ -0.98
PCDHB11-201ENST00000354757 SND1-IT1Q9HBX3 110 aa8.91□□□□□ -0.98
PCDHB11-201ENST00000354757 IGHV1-58A0A0C4DH39 117 aa8.91□□□□□ -0.98
PCDHB11-201ENST00000354757 LECT2O14960 151 aa8.91□□□□□ -0.98
PCDHB11-201ENST00000354757 KRTAP24-1Q3LI83 254 aa8.91□□□□□ -0.98
PCDHB11-201ENST00000354757 IGLV2-18A0A075B6J9 118 aa8.9□□□□□ -0.98
PCDHB11-201ENST00000354757 Q9UF83 564 aa8.9□□□□□ -0.98
PCDHB11-201ENST00000354757 CCDC179H3BU77 68 aa8.9□□□□□ -0.98
PCDHB11-201ENST00000354757 KPRPQ5T749 579 aaPredicted RBP8.9□□□□□ -0.98
PCDHB11-201ENST00000354757 CLEC2BQ92478 149 aa8.9□□□□□ -0.99
PCDHB11-201ENST00000354757 TRBV6-5A0A0K0K1A5 114 aa8.89□□□□□ -0.99
PCDHB11-201ENST00000354757 FAM236AA0A1B0GUQ0 79 aa8.89□□□□□ -0.99
PCDHB11-201ENST00000354757 FAM236BA0A1B0GV22 79 aa8.89□□□□□ -0.99
PCDHB11-201ENST00000354757 CHCHD10Q8WYQ3 142 aaPredicted RBP8.88□□□□□ -0.99
PCDHB11-201ENST00000354757 KRTAP1-3Q8IUG1 177 aa8.88□□□□□ -0.99
PCDHB11-201ENST00000354757 ASH1LQ9NR48 2969 aaKnown RBP8.88□□□□□ -0.99
PCDHB11-201ENST00000354757 KIR2DL5BQ8NHK3 375 aa8.87□□□□□ -0.99
PCDHB11-201ENST00000354757 RMI2Q96E14 147 aa8.87□□□□□ -0.99
PCDHB11-201ENST00000354757 LINC00694P0DN24 101 aa8.87□□□□□ -0.99
PCDHB11-201ENST00000354757 Q6ZTC4 211 aa8.87□□□□□ -0.99
PCDHB11-201ENST00000354757 COX8CQ7Z4L0 72 aa8.87□□□□□ -0.99
PCDHB11-201ENST00000354757 HIST1H4AP62805 103 aaKnown RBP8.87□□□□□ -0.99
PCDHB11-201ENST00000354757 CDIP1Q9H305 208 aa8.87□□□□□ -0.99
PCDHB11-201ENST00000354757 IGKV2-24A0A0C4DH68 120 aa8.86□□□□□ -0.99
PCDHB11-201ENST00000354757 FHL3Q13643 280 aa8.85□□□□□ -0.99
PCDHB11-201ENST00000354757 PIK3CD-AS1Q5SR53 167 aa8.85□□□□□ -0.99
PCDHB11-201ENST00000354757 A0A0J9YXY3 114 aa8.85□□□□□ -0.99
PCDHB11-201ENST00000354757 TRBV10-2A0A0K0K1G8 114 aa8.85□□□□□ -0.99
PCDHB11-201ENST00000354757 NCR3O14931 201 aa8.85□□□□□ -0.99
PCDHB11-201ENST00000354757 SVIPQ8NHG7 77 aa8.85□□□□□ -0.99
PCDHB11-201ENST00000354757 XAGE1AQ9HD64 81 aa8.85□□□□□ -0.99
PCDHB11-201ENST00000354757 UBE2D4Q9Y2X8 147 aa8.85□□□□□ -0.99
PCDHB11-201ENST00000354757 NSD1Q96L73 2696 aaPredicted RBP8.84□□□□□ -0.99
PCDHB11-201ENST00000354757 UBE2D3P61077 147 aa8.84□□□□□ -0.99
PCDHB11-201ENST00000354757 UBE2D2P62837 147 aa8.84□□□□□ -0.99
PCDHB11-201ENST00000354757 M0R2N4 97 aa8.84□□□□□ -0.99
PCDHB11-201ENST00000354757 CELSR2Q9HCU4 2923 aa8.84□□□□□ -0.99
PCDHB11-201ENST00000354757 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.83□□□□□ -1
PCDHB11-201ENST00000354757 TINCRA0A1B0GVN0 87 aa8.83□□□□□ -1
PCDHB11-201ENST00000354757 NDUFA1O15239 70 aa8.83□□□□□ -1
PCDHB11-201ENST00000354757 UBE2BP63146 152 aa8.83□□□□□ -1
PCDHB11-201ENST00000354757 RPL32P62910 135 aaKnown RBP8.83□□□□□ -1
PCDHB11-201ENST00000354757 IGLV4-60A0A075B6I1 120 aa8.83□□□□□ -1
PCDHB11-201ENST00000354757 TRAV13-2A0A0B4J235 113 aa8.83□□□□□ -1
PCDHB11-201ENST00000354757 SMCPP49901 116 aaPredicted RBP8.83□□□□□ -1
PCDHB11-201ENST00000354757 IGIPA6NJ69 53 aa8.82□□□□□ -1
PCDHB11-201ENST00000354757 DEFB105AQ8NG35 78 aa8.82□□□□□ -1
PCDHB11-201ENST00000354757 DCHS2Q6V1P9 2916 aa8.82□□□□□ -1
PCDHB11-201ENST00000354757 APCP25054 2843 aa8.82□□□□□ -1
PCDHB11-201ENST00000354757 TMEM223A0PJW6 202 aa8.81□□□□□ -1
PCDHB11-201ENST00000354757 FHL2Q14192 279 aa8.81□□□□□ -1
PCDHB11-201ENST00000354757 UBE2D1P51668 147 aa8.81□□□□□ -1
PCDHB11-201ENST00000354757 PRO0461Q9UI25 63 aa8.81□□□□□ -1
PCDHB11-201ENST00000354757 NF1P21359 2839 aa8.81□□□□□ -1
PCDHB11-201ENST00000354757 TRIAP1O43715 76 aa8.81□□□□□ -1
PCDHB11-201ENST00000354757 BEAN1Q3B7T3 259 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms