RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 FAM19A4Q96LR4 140 aa8.87□□□□□ -0.99
SMAD9-201ENST00000350148 TRBV6-8A0A0A6YYG3 113 aa8.87□□□□□ -0.99
SMAD9-201ENST00000350148 SERTAD4-AS1Q5TG53 156 aa8.87□□□□□ -0.99
SMAD9-201ENST00000350148 IGKV2D-24A0A075B6R9 120 aa8.86□□□□□ -0.99
SMAD9-201ENST00000350148 C5orf38Q86SI9 138 aa8.86□□□□□ -0.99
SMAD9-201ENST00000350148 SNURFQ9Y675 71 aa8.86□□□□□ -0.99
SMAD9-201ENST00000350148 EDN2P20800 178 aa8.86□□□□□ -0.99
SMAD9-201ENST00000350148 P0DMU3 169 aa8.86□□□□□ -0.99
SMAD9-201ENST00000350148 FAM231AP0DMU4 169 aa8.86□□□□□ -0.99
SMAD9-201ENST00000350148 FAM231CP0DMU5 169 aa8.86□□□□□ -0.99
SMAD9-201ENST00000350148 NKAPP1Q8N9T2 125 aa8.86□□□□□ -0.99
SMAD9-201ENST00000350148 NOTCH2Q04721 2471 aa8.85□□□□□ -0.99
SMAD9-201ENST00000350148 IGHV4-28A0A0C4DH34 117 aa8.85□□□□□ -0.99
SMAD9-201ENST00000350148 GAS8-AS1O95177 125 aa8.85□□□□□ -0.99
SMAD9-201ENST00000350148 IGHV3-30-3P0DP02 117 aa8.84□□□□□ -0.99
SMAD9-201ENST00000350148 CLPSL2Q6UWE3 100 aa8.84□□□□□ -0.99
SMAD9-201ENST00000350148 NFE4Q86UQ8 179 aa8.84□□□□□ -0.99
SMAD9-201ENST00000350148 A0A0J9YXY3 114 aa8.84□□□□□ -0.99
SMAD9-201ENST00000350148 LECT2O14960 151 aa8.84□□□□□ -0.99
SMAD9-201ENST00000350148 ENHOQ6UWT2 76 aa8.84□□□□□ -0.99
SMAD9-201ENST00000350148 PKD1L2Q7Z442 2459 aa8.84□□□□□ -0.99
SMAD9-201ENST00000350148 NDUFA1O15239 70 aa8.84□□□□□ -0.99
SMAD9-201ENST00000350148 DSCAML1Q8TD84 2053 aa8.84□□□□□ -0.99
SMAD9-201ENST00000350148 TMEM223A0PJW6 202 aa8.84□□□□□ -0.99
SMAD9-201ENST00000350148 H3BQ85 93 aa8.83□□□□□ -1
SMAD9-201ENST00000350148 DEFB4AO15263 64 aa8.83□□□□□ -1
SMAD9-201ENST00000350148 UBE2D3P61077 147 aa8.83□□□□□ -1
SMAD9-201ENST00000350148 UBE2D2P62837 147 aa8.83□□□□□ -1
SMAD9-201ENST00000350148 SOSTDC1Q6X4U4 206 aa8.83□□□□□ -1
SMAD9-201ENST00000350148 C1orf158Q8N1D5 194 aa8.83□□□□□ -1
SMAD9-201ENST00000350148 ZNF22P17026 224 aaPredicted RBP8.82□□□□□ -1
SMAD9-201ENST00000350148 CHD8Q9HCK8 2581 aa8.82□□□□□ -1
SMAD9-201ENST00000350148 TRAV10A0A0B4J240 114 aa8.82□□□□□ -1
SMAD9-201ENST00000350148 CAMK2N2Q96S95 79 aa8.82□□□□□ -1
SMAD9-201ENST00000350148 OPRPNQ99935 248 aaPredicted RBP8.82□□□□□ -1
SMAD9-201ENST00000350148 IGHV3-30P01768 117 aa8.82□□□□□ -1
SMAD9-201ENST00000350148 IGHV3-33P01772 117 aa8.82□□□□□ -1
SMAD9-201ENST00000350148 IGHV3-30-5P0DP03 117 aa8.82□□□□□ -1
SMAD9-201ENST00000350148 CCDC168Q8NDH2 2452 aa8.81□□□□□ -1
SMAD9-201ENST00000350148 SND1-IT1Q9HBX3 110 aa8.81□□□□□ -1
SMAD9-201ENST00000350148 ZNF462Q96JM2 2506 aa8.81□□□□□ -1
SMAD9-201ENST00000350148 Q9HAA7 133 aa8.81□□□□□ -1
SMAD9-201ENST00000350148 DEFB131BA0A096LNP1 70 aa8.8□□□□□ -1
SMAD9-201ENST00000350148 UBE2D4Q9Y2X8 147 aa8.8□□□□□ -1
SMAD9-201ENST00000350148 TMEM256-PLSCR3K7ERE1 68 aa8.8□□□□□ -1
SMAD9-201ENST00000350148 PDE6GP18545 87 aa8.8□□□□□ -1
SMAD9-201ENST00000350148 LELP1Q5T871 98 aa8.8□□□□□ -1
SMAD9-201ENST00000350148 WFDC10AQ9H1F0 79 aa8.8□□□□□ -1
SMAD9-201ENST00000350148 IGHV4-30-4P0DP06 118 aa8.8□□□□□ -1
SMAD9-201ENST00000350148 SPAG11BQ08648 103 aa8.8□□□□□ -1
SMAD9-201ENST00000350148 MIAQ16674 131 aa8.8□□□□□ -1
SMAD9-201ENST00000350148 REG3AQ06141 175 aa8.8□□□□□ -1
SMAD9-201ENST00000350148 KLK12Q9UKR0 248 aa8.8□□□□□ -1
SMAD9-201ENST00000350148 LINC01546A6NGU7 62 aa8.79□□□□□ -1
SMAD9-201ENST00000350148 CHCHD7Q9BUK0 85 aa8.79□□□□□ -1
SMAD9-201ENST00000350148 IGIPA6NJ69 53 aa8.79□□□□□ -1
SMAD9-201ENST00000350148 NOTCH3Q9UM47 2321 aa8.79□□□□□ -1
SMAD9-201ENST00000350148 C14orf177Q52M58 125 aa8.79□□□□□ -1
SMAD9-201ENST00000350148 CEMP1Q6PRD7 247 aaPredicted RBP8.78□□□□□ -1
SMAD9-201ENST00000350148 HIGD2BQ4VC39 106 aa8.78□□□□□ -1
SMAD9-201ENST00000350148 DAND5Q8N907 189 aa8.78□□□□□ -1
SMAD9-201ENST00000350148 MUC7Q8TAX7 377 aa8.77□□□□□ -1
SMAD9-201ENST00000350148 IGLV2-18A0A075B6J9 118 aa8.77□□□□□ -1.01
SMAD9-201ENST00000350148 MYO18BQ8IUG5 2567 aa8.77□□□□□ -1.01
SMAD9-201ENST00000350148 IGLV10-54A0A075B6I4 117 aa8.77□□□□□ -1.01
SMAD9-201ENST00000350148 IBA57-AS1B1ANH7 110 aa8.76□□□□□ -1.01
SMAD9-201ENST00000350148 POM121L12Q8N7R1 296 aa8.76□□□□□ -1.01
SMAD9-201ENST00000350148 PRR15LQ9BU68 103 aa8.76□□□□□ -1.01
SMAD9-201ENST00000350148 CDKN2A-AS1Q9UH64 79 aa8.76□□□□□ -1.01
SMAD9-201ENST00000350148 KIF25-AS1Q9Y6Z4 181 aa8.76□□□□□ -1.01
SMAD9-201ENST00000350148 F8WDY8 70 aa8.76□□□□□ -1.01
SMAD9-201ENST00000350148 C4orf26Q17RF5 130 aa8.76□□□□□ -1.01
SMAD9-201ENST00000350148 DEFB105AQ8NG35 78 aa8.76□□□□□ -1.01
SMAD9-201ENST00000350148 CHCHD10Q8WYQ3 142 aaPredicted RBP8.76□□□□□ -1.01
SMAD9-201ENST00000350148 LINC00269Q8N2A0 174 aa8.75□□□□□ -1.01
SMAD9-201ENST00000350148 CELSR3Q9NYQ7 3312 aa8.75□□□□□ -1.01
SMAD9-201ENST00000350148 UBE2D1P51668 147 aa8.75□□□□□ -1.01
SMAD9-201ENST00000350148 TRBV30A0A0K0K1B3 111 aa8.75□□□□□ -1.01
SMAD9-201ENST00000350148 A0A096LNJ9 63 aa8.74□□□□□ -1.01
SMAD9-201ENST00000350148 BPY2O14599 106 aa8.74□□□□□ -1.01
SMAD9-201ENST00000350148 CD164L2Q6UWJ8 174 aa8.74□□□□□ -1.01
SMAD9-201ENST00000350148 K7ERS5 55 aa8.73□□□□□ -1.01
SMAD9-201ENST00000350148 TRIAP1O43715 76 aa8.73□□□□□ -1.01
SMAD9-201ENST00000350148 RPS28P62857 69 aaKnown RBP8.73□□□□□ -1.01
SMAD9-201ENST00000350148 FAM19A3Q7Z5A8 133 aa8.73□□□□□ -1.01
SMAD9-201ENST00000350148 CDC42SE2Q9NRR3 84 aa8.73□□□□□ -1.01
SMAD9-201ENST00000350148 FHL2Q14192 279 aa8.73□□□□□ -1.01
SMAD9-201ENST00000350148 MIR7-3HGQ8N6C7 128 aa8.73□□□□□ -1.01
SMAD9-201ENST00000350148 C11orf72Q8NBR9 251 aa8.73□□□□□ -1.01
SMAD9-201ENST00000350148 NDUFB1O75438 58 aa8.72□□□□□ -1.01
SMAD9-201ENST00000350148 KPRPQ5T749 579 aaPredicted RBP8.72□□□□□ -1.01
SMAD9-201ENST00000350148 A8MTW9 85 aa8.72□□□□□ -1.01
SMAD9-201ENST00000350148 Q6JHZ5 121 aa8.72□□□□□ -1.01
SMAD9-201ENST00000350148 LRCOL1A6NCL2 159 aa8.71□□□□□ -1.01
SMAD9-201ENST00000350148 AMELXQ99217 191 aa8.71□□□□□ -1.02
SMAD9-201ENST00000350148 PSPHP1O15172 72 aa8.71□□□□□ -1.02
SMAD9-201ENST00000350148 TRAV7A0A075B6U4 112 aa8.7□□□□□ -1.02
SMAD9-201ENST00000350148 LINC00959A0A1B0GUT2 108 aa8.7□□□□□ -1.02
SMAD9-201ENST00000350148 SPTBN5Q9NRC6 3674 aaKnown RBP8.7□□□□□ -1.02
SMAD9-201ENST00000350148 SCXQ7RTU7 201 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms