RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 TRGV4A0A0C4DH28 118 aa10.97□□□□□ -0.65
TNFSF13-202ENST00000349228 H3BT86 120 aa10.97□□□□□ -0.65
TNFSF13-202ENST00000349228 RPL13AP40429 203 aaKnown RBP10.97□□□□□ -0.65
TNFSF13-202ENST00000349228 ZNF625Q96I27 306 aaPredicted RBP10.97□□□□□ -0.65
TNFSF13-202ENST00000349228 ABCA12Q86UK0 2595 aa10.97□□□□□ -0.65
TNFSF13-202ENST00000349228 EPG5Q9HCE0 2579 aa10.96□□□□□ -0.65
TNFSF13-202ENST00000349228 B5MCH6 92 aa10.96□□□□□ -0.65
TNFSF13-202ENST00000349228 C6orf226Q5I0X4 101 aa10.96□□□□□ -0.65
TNFSF13-202ENST00000349228 CENPEQ02224 2701 aa10.96□□□□□ -0.66
TNFSF13-202ENST00000349228 PRIMA1Q86XR5 153 aa10.96□□□□□ -0.66
TNFSF13-202ENST00000349228 LST1O00453 97 aa10.95□□□□□ -0.66
TNFSF13-202ENST00000349228 NPC2P61916 151 aa10.95□□□□□ -0.66
TNFSF13-202ENST00000349228 FHL2Q14192 279 aa10.94□□□□□ -0.66
TNFSF13-202ENST00000349228 MEIG1Q5JSS6 88 aa10.94□□□□□ -0.66
TNFSF13-202ENST00000349228 C2orf82Q6UX34 121 aa10.94□□□□□ -0.66
TNFSF13-202ENST00000349228 WFDC10AQ9H1F0 79 aa10.94□□□□□ -0.66
TNFSF13-202ENST00000349228 NTN5Q8WTR8 489 aaPredicted RBP10.93□□□□□ -0.66
TNFSF13-202ENST00000349228 APCP25054 2843 aa10.93□□□□□ -0.66
TNFSF13-202ENST00000349228 TRBV6-8A0A0A6YYG3 113 aa10.92□□□□□ -0.66
TNFSF13-202ENST00000349228 DAND5Q8N907 189 aa10.92□□□□□ -0.66
TNFSF13-202ENST00000349228 J3QKU1 62 aa10.92□□□□□ -0.66
TNFSF13-202ENST00000349228 V9GYY9 64 aa10.92□□□□□ -0.66
TNFSF13-202ENST00000349228 ITPR3Q14573 2671 aa10.91□□□□□ -0.66
TNFSF13-202ENST00000349228 HIST2H2BCQ6DN03 193 aa10.91□□□□□ -0.66
TNFSF13-202ENST00000349228 UBE2WQ96B02 151 aa10.91□□□□□ -0.66
TNFSF13-202ENST00000349228 LOC100131303A0A0U1RQF7 123 aa10.9□□□□□ -0.66
TNFSF13-202ENST00000349228 LINC00612Q8N6U2 182 aa10.9□□□□□ -0.66
TNFSF13-202ENST00000349228 COX7B2Q8TF08 81 aa10.9□□□□□ -0.66
TNFSF13-202ENST00000349228 PLA2G2AP14555 144 aa10.89□□□□□ -0.67
TNFSF13-202ENST00000349228 XGP55808 180 aa10.89□□□□□ -0.67
TNFSF13-202ENST00000349228 C4orf48Q5BLP8 95 aa10.89□□□□□ -0.67
TNFSF13-202ENST00000349228 COX7A2LO14548 114 aa10.89□□□□□ -0.67
TNFSF13-202ENST00000349228 MT-ATP8P03928 68 aa10.89□□□□□ -0.67
TNFSF13-202ENST00000349228 SOSTDC1Q6X4U4 206 aa10.88□□□□□ -0.67
TNFSF13-202ENST00000349228 CLEC2BQ92478 149 aa10.88□□□□□ -0.67
TNFSF13-202ENST00000349228 CHCHD5Q9BSY4 110 aa10.88□□□□□ -0.67
TNFSF13-202ENST00000349228 DEFB121Q5J5C9 76 aa10.87□□□□□ -0.67
TNFSF13-202ENST00000349228 FAM222AQ5U5X8 452 aa10.87□□□□□ -0.67
TNFSF13-202ENST00000349228 LINC00482Q8N8I6 264 aa10.87□□□□□ -0.67
TNFSF13-202ENST00000349228 TRAV13-2A0A0B4J235 113 aa10.87□□□□□ -0.67
TNFSF13-202ENST00000349228 TRAV8-4A0A0B4J246 113 aa10.87□□□□□ -0.67
TNFSF13-202ENST00000349228 TEX49A0A1B0GTD5 131 aa10.86□□□□□ -0.67
TNFSF13-202ENST00000349228 TMEM126AQ9H061 195 aa10.86□□□□□ -0.67
TNFSF13-202ENST00000349228 A0A087WZ39 114 aa10.85□□□□□ -0.67
TNFSF13-202ENST00000349228 IGHV3OR16-9A0A0B4J2B5 98 aa10.85□□□□□ -0.67
TNFSF13-202ENST00000349228 CHD6Q8TD26 2715 aa10.85□□□□□ -0.67
TNFSF13-202ENST00000349228 KMT2BQ9UMN6 2715 aaPredicted RBP10.85□□□□□ -0.67
TNFSF13-202ENST00000349228 IGLV4-60A0A075B6I1 120 aa10.84□□□□□ -0.67
TNFSF13-202ENST00000349228 FAM240AA0A1B0GVK7 77 aa10.84□□□□□ -0.67
TNFSF13-202ENST00000349228 TRACP01848 142 aa10.84□□□□□ -0.67
TNFSF13-202ENST00000349228 TLN2Q9Y4G6 2542 aa10.84□□□□□ -0.67
TNFSF13-202ENST00000349228 A0A1B0GUV1 79 aa10.84□□□□□ -0.67
TNFSF13-202ENST00000349228 IBA57-AS1B1ANH7 110 aa10.84□□□□□ -0.67
TNFSF13-202ENST00000349228 OR13C6PQ8NH95 151 aa10.84□□□□□ -0.67
TNFSF13-202ENST00000349228 SONP18583 2426 aaKnown RBP10.83□□□□□ -0.68
TNFSF13-202ENST00000349228 CRLF1O75462 422 aa10.83□□□□□ -0.68
TNFSF13-202ENST00000349228 LINC01561Q8N1V8 128 aa10.83□□□□□ -0.68
TNFSF13-202ENST00000349228 DEFB130BP0DP73 79 aa10.82□□□□□ -0.68
TNFSF13-202ENST00000349228 DEFB130AP0DP74 79 aa10.82□□□□□ -0.68
TNFSF13-202ENST00000349228 ANAPC13Q9BS18 74 aa10.82□□□□□ -0.68
TNFSF13-202ENST00000349228 KRTAP10-3P60369 221 aa10.82□□□□□ -0.68
TNFSF13-202ENST00000349228 C9orf66Q5T8R8 295 aa10.82□□□□□ -0.68
TNFSF13-202ENST00000349228 PRO0255Q9UI72 69 aa10.82□□□□□ -0.68
TNFSF13-202ENST00000349228 LINC00959A0A1B0GUT2 108 aa10.81□□□□□ -0.68
TNFSF13-202ENST00000349228 LYRM9A8MSI8 78 aa10.81□□□□□ -0.68
TNFSF13-202ENST00000349228 SNCGO76070 127 aa10.81□□□□□ -0.68
TNFSF13-202ENST00000349228 FLNAP21333 2647 aaKnown RBP10.81□□□□□ -0.68
TNFSF13-202ENST00000349228 RPL28P46779 137 aaKnown RBP10.81□□□□□ -0.68
TNFSF13-202ENST00000349228 TOMM7Q9P0U1 55 aa10.81□□□□□ -0.68
TNFSF13-202ENST00000349228 WNK1Q9H4A3 2382 aa10.81□□□□□ -0.68
TNFSF13-202ENST00000349228 CRPP02741 224 aa10.8□□□□□ -0.68
TNFSF13-202ENST00000349228 GYPEP15421 78 aa10.8□□□□□ -0.68
TNFSF13-202ENST00000349228 SS18Q15532 418 aa10.8□□□□□ -0.68
TNFSF13-202ENST00000349228 MIR7-3HGQ8N6C7 128 aa10.8□□□□□ -0.68
TNFSF13-202ENST00000349228 X6R8D5 127 aa10.8□□□□□ -0.68
TNFSF13-202ENST00000349228 IGKV3OR2-268A0A0C4DH90 116 aa10.79□□□□□ -0.68
TNFSF13-202ENST00000349228 LINC00158P58513 81 aa10.79□□□□□ -0.68
TNFSF13-202ENST00000349228 Q6Q795 121 aa10.79□□□□□ -0.68
TNFSF13-202ENST00000349228 SND1-IT1Q9HBX3 110 aa10.79□□□□□ -0.68
TNFSF13-202ENST00000349228 ACYP1P07311 99 aa10.79□□□□□ -0.68
TNFSF13-202ENST00000349228 AKAP9Q99996 3911 aa10.78□□□□□ -0.68
TNFSF13-202ENST00000349228 GAGE2BQ13066 116 aa10.77□□□□□ -0.68
TNFSF13-202ENST00000349228 GAGE2EQ4V326 116 aa10.77□□□□□ -0.68
TNFSF13-202ENST00000349228 GAGE2DQ9UEU5 116 aa10.77□□□□□ -0.68
TNFSF13-202ENST00000349228 PDZD2O15018 2839 aa10.77□□□□□ -0.69
TNFSF13-202ENST00000349228 CCDC168Q8NDH2 2452 aa10.76□□□□□ -0.69
TNFSF13-202ENST00000349228 C5orf38Q86SI9 138 aa10.76□□□□□ -0.69
TNFSF13-202ENST00000349228 H0YGX0 51 aa10.75□□□□□ -0.69
TNFSF13-202ENST00000349228 LY6G6DO95868 133 aa10.75□□□□□ -0.69
TNFSF13-202ENST00000349228 Q8IZM0 81 aa10.75□□□□□ -0.69
TNFSF13-202ENST00000349228 PAX4O43316 350 aa10.75□□□□□ -0.69
TNFSF13-202ENST00000349228 APOC4P55056 127 aa10.75□□□□□ -0.69
TNFSF13-202ENST00000349228 ZNF469Q96JG9 3925 aaPredicted RBP10.74□□□□□ -0.69
TNFSF13-202ENST00000349228 IGKV2-28A0A075B6P5 120 aa10.74□□□□□ -0.69
TNFSF13-202ENST00000349228 IGKV2D-28P01615 120 aa10.74□□□□□ -0.69
TNFSF13-202ENST00000349228 BAALC-AS2P0C853 105 aa10.74□□□□□ -0.69
TNFSF13-202ENST00000349228 CCL18P55774 89 aa10.74□□□□□ -0.69
TNFSF13-202ENST00000349228 C15orf53Q8NAA6 179 aa10.74□□□□□ -0.69
TNFSF13-202ENST00000349228 FAM19A5Q7Z5A7 132 aaPredicted RBP10.74□□□□□ -0.69
TNFSF13-202ENST00000349228 LINC00337Q8N6G1 96 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms