RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 LINC00269Q8N2A0 174 aa12.77□□□□□ -0.36
PTN-201ENST00000348225 TRAV8-3A0A0A6YYJ7 113 aa12.77□□□□□ -0.37
PTN-201ENST00000348225 SNHG12Q9BXW3 62 aa12.77□□□□□ -0.37
PTN-201ENST00000348225 REG3AQ06141 175 aa12.76□□□□□ -0.37
PTN-201ENST00000348225 CLPSL2Q6UWE3 100 aa12.76□□□□□ -0.37
PTN-201ENST00000348225 Q8N3U1 123 aa12.76□□□□□ -0.37
PTN-201ENST00000348225 IGLL5B9A064 214 aa12.75□□□□□ -0.37
PTN-201ENST00000348225 HSD52Q0P140 79 aa12.75□□□□□ -0.37
PTN-201ENST00000348225 SCGB1D4Q6XE38 83 aa12.75□□□□□ -0.37
PTN-201ENST00000348225 WFDC10BQ8IUB3 73 aa12.75□□□□□ -0.37
PTN-201ENST00000348225 EREGO14944 169 aa12.74□□□□□ -0.37
PTN-201ENST00000348225 HINT1P49773 126 aaPredicted RBP12.74□□□□□ -0.37
PTN-201ENST00000348225 BATFQ16520 125 aa12.74□□□□□ -0.37
PTN-201ENST00000348225 COL7A1Q02388 2944 aa12.74□□□□□ -0.37
PTN-201ENST00000348225 IGLV5-39A0A0G2JS06 123 aa12.73□□□□□ -0.37
PTN-201ENST00000348225 SMIM1B2RUZ4 78 aa12.73□□□□□ -0.37
PTN-201ENST00000348225 LBHQ53QV2 105 aaPredicted RBP12.73□□□□□ -0.37
PTN-201ENST00000348225 IGHV3OR16-9A0A0B4J2B5 98 aa12.73□□□□□ -0.37
PTN-201ENST00000348225 IGHV3-30P01768 117 aa12.72□□□□□ -0.37
PTN-201ENST00000348225 IGHV3-33P01772 117 aa12.72□□□□□ -0.37
PTN-201ENST00000348225 IGHV3-30-5P0DP03 117 aa12.72□□□□□ -0.37
PTN-201ENST00000348225 XCL1P47992 114 aa12.72□□□□□ -0.37
PTN-201ENST00000348225 KLK12Q9UKR0 248 aa12.72□□□□□ -0.37
PTN-201ENST00000348225 A0A087WZ39 114 aa12.71□□□□□ -0.37
PTN-201ENST00000348225 ZFAND6Q6FIF0 208 aa12.71□□□□□ -0.37
PTN-201ENST00000348225 PRR34Q9NV39 138 aa12.71□□□□□ -0.37
PTN-201ENST00000348225 CRPP02741 224 aa12.7□□□□□ -0.38
PTN-201ENST00000348225 CCL18P55774 89 aa12.7□□□□□ -0.38
PTN-201ENST00000348225 NDUFA12Q9UI09 145 aa12.7□□□□□ -0.38
PTN-201ENST00000348225 TAL2Q16559 108 aa12.7□□□□□ -0.38
PTN-201ENST00000348225 LINC01556Q5JQF7 62 aa12.7□□□□□ -0.38
PTN-201ENST00000348225 BVES-AS1Q5T3Y7 98 aa12.7□□□□□ -0.38
PTN-201ENST00000348225 CD164L2Q6UWJ8 174 aa12.7□□□□□ -0.38
PTN-201ENST00000348225 CHCHD10Q8WYQ3 142 aaPredicted RBP12.7□□□□□ -0.38
PTN-201ENST00000348225 LINC01561Q8N1V8 128 aa12.69□□□□□ -0.38
PTN-201ENST00000348225 PRKDCP78527 4128 aaKnown RBP12.69□□□□□ -0.38
PTN-201ENST00000348225 C5orf38Q86SI9 138 aa12.68□□□□□ -0.38
PTN-201ENST00000348225 STAB2Q8WWQ8 2551 aa12.68□□□□□ -0.38
PTN-201ENST00000348225 HIST1H4GQ99525 98 aa12.67□□□□□ -0.38
PTN-201ENST00000348225 LINC00588Q9Y4M8 146 aa12.67□□□□□ -0.38
PTN-201ENST00000348225 MEGF8Q7Z7M0 2845 aa12.67□□□□□ -0.38
PTN-201ENST00000348225 IGLV10-54A0A075B6I4 117 aa12.66□□□□□ -0.38
PTN-201ENST00000348225 TRAV8-4A0A0B4J246 113 aa12.66□□□□□ -0.38
PTN-201ENST00000348225 NDUFA1O15239 70 aa12.66□□□□□ -0.38
PTN-201ENST00000348225 C10orf126Q8N4M7 172 aa12.66□□□□□ -0.38
PTN-201ENST00000348225 UBE2WQ96B02 151 aa12.66□□□□□ -0.38
PTN-201ENST00000348225 DNAH10OSP0CZ25 163 aa12.66□□□□□ -0.38
PTN-201ENST00000348225 COL5A1-AS1Q5SY13 56 aa12.66□□□□□ -0.38
PTN-201ENST00000348225 ENHOQ6UWT2 76 aa12.66□□□□□ -0.38
PTN-201ENST00000348225 A0A0J9YXY3 114 aa12.65□□□□□ -0.38
PTN-201ENST00000348225 COX7A2LO14548 114 aa12.65□□□□□ -0.38
PTN-201ENST00000348225 GCSHP23434 173 aa12.65□□□□□ -0.38
PTN-201ENST00000348225 MIAQ16674 131 aa12.65□□□□□ -0.38
PTN-201ENST00000348225 COX7B2Q8TF08 81 aa12.65□□□□□ -0.38
PTN-201ENST00000348225 ORAOV1Q8WV07 137 aa12.65□□□□□ -0.38
PTN-201ENST00000348225 SPANXB1Q9NS25 103 aaPredicted RBP12.65□□□□□ -0.38
PTN-201ENST00000348225 FBN3Q75N90 2809 aa12.64□□□□□ -0.39
PTN-201ENST00000348225 NUPR2A6NF83 97 aa12.64□□□□□ -0.39
PTN-201ENST00000348225 TMEM238C9JI98 176 aa12.64□□□□□ -0.39
PTN-201ENST00000348225 CEND1Q8N111 149 aa12.64□□□□□ -0.39
PTN-201ENST00000348225 SRSF9Q13242 221 aaKnown RBP eCLIP12.63□□□□□ -0.39
PTN-201ENST00000348225 UPK3BQ9BT76 320 aa12.63□□□□□ -0.39
PTN-201ENST00000348225 Q9H8V8 135 aa12.63□□□□□ -0.39
PTN-201ENST00000348225 TOMM7Q9P0U1 55 aa12.63□□□□□ -0.39
PTN-201ENST00000348225 KLK5Q9Y337 293 aaPredicted RBP12.63□□□□□ -0.39
PTN-201ENST00000348225 DYNC2H1Q8NCM8 4307 aaKnown RBP12.63□□□□□ -0.39
PTN-201ENST00000348225 FOXI1Q12951 378 aa12.62□□□□□ -0.39
PTN-201ENST00000348225 TM2D2Q9BX73 214 aa12.62□□□□□ -0.39
PTN-201ENST00000348225 GAGE12HA6NDE8 117 aa12.62□□□□□ -0.39
PTN-201ENST00000348225 MALP21145 153 aa12.62□□□□□ -0.39
PTN-201ENST00000348225 HERV-K104P63124 156 aa12.62□□□□□ -0.39
PTN-201ENST00000348225 A6NDN8 102 aa12.61□□□□□ -0.39
PTN-201ENST00000348225 SFTA2Q6UW10 78 aa12.61□□□□□ -0.39
PTN-201ENST00000348225 ZNF625Q96I27 306 aaPredicted RBP12.61□□□□□ -0.39
PTN-201ENST00000348225 TIMM17BO60830 172 aa12.6□□□□□ -0.39
PTN-201ENST00000348225 PRSS2P07478 247 aa12.6□□□□□ -0.39
PTN-201ENST00000348225 PTTG1IPP53801 180 aa12.6□□□□□ -0.39
PTN-201ENST00000348225 APLNQ9ULZ1 77 aa12.6□□□□□ -0.39
PTN-201ENST00000348225 APOMO95445 188 aa12.59□□□□□ -0.39
PTN-201ENST00000348225 Q8IZM0 81 aa12.59□□□□□ -0.39
PTN-201ENST00000348225 FXYD2P54710 66 aa12.59□□□□□ -0.39
PTN-201ENST00000348225 CIRBPQ14011 172 aaKnown RBP12.59□□□□□ -0.39
PTN-201ENST00000348225 TMEM238LA0A1B0GVL6 79 aa12.57□□□□□ -0.4
PTN-201ENST00000348225 A6NJY4 79 aa12.57□□□□□ -0.4
PTN-201ENST00000348225 C6orf226Q5I0X4 101 aa12.57□□□□□ -0.4
PTN-201ENST00000348225 Q6ZVH6 145 aa12.57□□□□□ -0.4
PTN-201ENST00000348225 DNAH7Q8WXX0 4024 aa12.57□□□□□ -0.4
PTN-201ENST00000348225 UBE2DNLQ8IWF7 75 aa12.56□□□□□ -0.4
PTN-201ENST00000348225 LITAFQ99732 161 aa12.56□□□□□ -0.4
PTN-201ENST00000348225 C1orf43Q9BWL3 253 aa12.56□□□□□ -0.4
PTN-201ENST00000348225 SPANXDQ9BXN6 97 aa12.56□□□□□ -0.4
PTN-201ENST00000348225 SPANXCQ9NY87 97 aa12.56□□□□□ -0.4
PTN-201ENST00000348225 MEIG1Q5JSS6 88 aa12.55□□□□□ -0.4
PTN-201ENST00000348225 CFAP161Q6P656 301 aa12.55□□□□□ -0.4
PTN-201ENST00000348225 IBA57-AS1B1ANH7 110 aa12.54□□□□□ -0.4
PTN-201ENST00000348225 CXCL5P42830 114 aa12.54□□□□□ -0.4
PTN-201ENST00000348225 K7EP13 123 aa12.53□□□□□ -0.4
PTN-201ENST00000348225 IGKV2D-24A0A075B6R9 120 aa12.52□□□□□ -0.4
PTN-201ENST00000348225 CKS1BP61024 79 aa12.52□□□□□ -0.4
PTN-201ENST00000348225 NHP2Q9NX24 153 aaKnown RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms