RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 FAM222AQ5U5X8 452 aa11.42□□□□□ -0.58
SRPK1-201ENST00000346162 IGLV4-69A0A075B6H9 119 aa11.41□□□□□ -0.58
SRPK1-201ENST00000346162 A0A1W2PPR1 153 aa11.41□□□□□ -0.58
SRPK1-201ENST00000346162 Q6ZTI0 123 aa11.4□□□□□ -0.58
SRPK1-201ENST00000346162 TRAV7A0A075B6U4 112 aa11.4□□□□□ -0.58
SRPK1-201ENST00000346162 RNASE3P12724 160 aaKnown RBP11.4□□□□□ -0.59
SRPK1-201ENST00000346162 PKD1L2Q7Z442 2459 aa11.39□□□□□ -0.59
SRPK1-201ENST00000346162 MTORP42345 2549 aa11.39□□□□□ -0.59
SRPK1-201ENST00000346162 BPY2O14599 106 aa11.39□□□□□ -0.59
SRPK1-201ENST00000346162 DEFB135Q30KP9 77 aa11.39□□□□□ -0.59
SRPK1-201ENST00000346162 IGLV2-18A0A075B6J9 118 aa11.39□□□□□ -0.59
SRPK1-201ENST00000346162 PMAIP1Q13794 54 aa11.39□□□□□ -0.59
SRPK1-201ENST00000346162 LINC00467Q9BRT7 94 aa11.39□□□□□ -0.59
SRPK1-201ENST00000346162 MIFP14174 115 aa11.38□□□□□ -0.59
SRPK1-201ENST00000346162 IGLV1-40P01703 118 aa11.38□□□□□ -0.59
SRPK1-201ENST00000346162 DEFB4AO15263 64 aa11.37□□□□□ -0.59
SRPK1-201ENST00000346162 FHL3Q13643 280 aa11.37□□□□□ -0.59
SRPK1-201ENST00000346162 SBSPONQ8IVN8 264 aa11.37□□□□□ -0.59
SRPK1-201ENST00000346162 AVPP01185 164 aa11.37□□□□□ -0.59
SRPK1-201ENST00000346162 COL4A2P08572 1712 aa11.37□□□□□ -0.59
SRPK1-201ENST00000346162 HTTP42858 3142 aa11.36□□□□□ -0.59
SRPK1-201ENST00000346162 KLLNB2CW77 178 aa11.36□□□□□ -0.59
SRPK1-201ENST00000346162 F8W735 103 aaPredicted RBP11.36□□□□□ -0.59
SRPK1-201ENST00000346162 COX8CQ7Z4L0 72 aa11.36□□□□□ -0.59
SRPK1-201ENST00000346162 PSMG3-AS1Q96PY0 264 aa11.36□□□□□ -0.59
SRPK1-201ENST00000346162 IGKV2D-24A0A075B6R9 120 aa11.36□□□□□ -0.59
SRPK1-201ENST00000346162 FAM19A3Q7Z5A8 133 aa11.36□□□□□ -0.59
SRPK1-201ENST00000346162 DIRC1Q969H9 104 aa11.36□□□□□ -0.59
SRPK1-201ENST00000346162 ZNF702PQ9H963 129 aa11.36□□□□□ -0.59
SRPK1-201ENST00000346162 ADAMTSL4-AS1Q5T5F5 129 aa11.35□□□□□ -0.59
SRPK1-201ENST00000346162 POLQO75417 2590 aa11.35□□□□□ -0.59
SRPK1-201ENST00000346162 TSHBP01222 138 aa11.35□□□□□ -0.59
SRPK1-201ENST00000346162 PRO0255Q9UI72 69 aa11.35□□□□□ -0.59
SRPK1-201ENST00000346162 IBA57-AS1B1ANH7 110 aa11.35□□□□□ -0.59
SRPK1-201ENST00000346162 ZNF843Q8N446 348 aa11.35□□□□□ -0.59
SRPK1-201ENST00000346162 SMIM11BQ8TCY0 68 aa11.35□□□□□ -0.59
SRPK1-201ENST00000346162 LRCOL1A6NCL2 159 aa11.35□□□□□ -0.59
SRPK1-201ENST00000346162 C5orf42Q9H799 3197 aa11.34□□□□□ -0.59
SRPK1-201ENST00000346162 DCANP1Q8TF63 244 aa11.34□□□□□ -0.59
SRPK1-201ENST00000346162 ZNF462Q96JM2 2506 aa11.34□□□□□ -0.59
SRPK1-201ENST00000346162 ZNF580Q9UK33 172 aa11.33□□□□□ -0.59
SRPK1-201ENST00000346162 PROK1P58294 105 aa11.33□□□□□ -0.6
SRPK1-201ENST00000346162 PRR4Q16378 134 aa11.32□□□□□ -0.6
SRPK1-201ENST00000346162 LINC00846Q9NV44 126 aa11.32□□□□□ -0.6
SRPK1-201ENST00000346162 RANBP2P49792 3224 aaKnown RBP11.32□□□□□ -0.6
SRPK1-201ENST00000346162 MRGPRG-AS1Q2M3A8 158 aa11.32□□□□□ -0.6
SRPK1-201ENST00000346162 RMI2Q96E14 147 aa11.32□□□□□ -0.6
SRPK1-201ENST00000346162 CCKP06307 115 aa11.32□□□□□ -0.6
SRPK1-201ENST00000346162 FAM19A1Q7Z5A9 133 aa11.31□□□□□ -0.6
SRPK1-201ENST00000346162 CAMK2N2Q96S95 79 aa11.31□□□□□ -0.6
SRPK1-201ENST00000346162 TET2Q6N021 2002 aaPredicted RBP11.3□□□□□ -0.6
SRPK1-201ENST00000346162 CRYGDP07320 174 aa11.3□□□□□ -0.6
SRPK1-201ENST00000346162 C18orf65Q6ZTR6 163 aa11.3□□□□□ -0.6
SRPK1-201ENST00000346162 C6orf99Q4VX62 202 aa11.29□□□□□ -0.6
SRPK1-201ENST00000346162 TRBV7-6A0A0J9YX20 115 aa11.29□□□□□ -0.6
SRPK1-201ENST00000346162 HILS1P60008 231 aa11.29□□□□□ -0.6
SRPK1-201ENST00000346162 KLK12Q9UKR0 248 aa11.29□□□□□ -0.6
SRPK1-201ENST00000346162 CHKB-CPT1BH3BT56 60 aa11.28□□□□□ -0.6
SRPK1-201ENST00000346162 C9orf85Q96MD7 179 aa11.28□□□□□ -0.6
SRPK1-201ENST00000346162 RAI1Q7Z5J4 1906 aaPredicted RBP11.28□□□□□ -0.6
SRPK1-201ENST00000346162 A6NED7 52 aa11.28□□□□□ -0.6
SRPK1-201ENST00000346162 COX7BP24311 80 aa11.28□□□□□ -0.6
SRPK1-201ENST00000346162 ADAMTS20P59510 1910 aa11.27□□□□□ -0.6
SRPK1-201ENST00000346162 FASNP49327 2511 aaKnown RBP11.27□□□□□ -0.61
SRPK1-201ENST00000346162 PRM2P04554 102 aa11.27□□□□□ -0.61
SRPK1-201ENST00000346162 SPAG11BQ08648 103 aa11.27□□□□□ -0.61
SRPK1-201ENST00000346162 ETDCA0A1B0GVM5 59 aa11.27□□□□□ -0.61
SRPK1-201ENST00000346162 EDN2P20800 178 aa11.27□□□□□ -0.61
SRPK1-201ENST00000346162 LYRM9A8MSI8 78 aa11.26□□□□□ -0.61
SRPK1-201ENST00000346162 LINC01546A6NGU7 62 aa11.25□□□□□ -0.61
SRPK1-201ENST00000346162 RPL28P46779 137 aaKnown RBP11.25□□□□□ -0.61
SRPK1-201ENST00000346162 LINC01006Q8NI28 216 aa11.25□□□□□ -0.61
SRPK1-201ENST00000346162 UBE2D4Q9Y2X8 147 aa11.25□□□□□ -0.61
SRPK1-201ENST00000346162 PSPHP1O15172 72 aa11.24□□□□□ -0.61
SRPK1-201ENST00000346162 Q8N3U1 123 aa11.24□□□□□ -0.61
SRPK1-201ENST00000346162 A0A087WYN8 130 aa11.23□□□□□ -0.61
SRPK1-201ENST00000346162 EPG5Q9HCE0 2579 aa11.23□□□□□ -0.61
SRPK1-201ENST00000346162 CHD9Q3L8U1 2897 aa11.23□□□□□ -0.61
SRPK1-201ENST00000346162 Q6ZQY7 126 aa11.23□□□□□ -0.61
SRPK1-201ENST00000346162 TRBV6-4A0A1B0GX49 114 aa11.22□□□□□ -0.61
SRPK1-201ENST00000346162 NDUFS5O43920 106 aa11.21□□□□□ -0.61
SRPK1-201ENST00000346162 CCL18P55774 89 aa11.21□□□□□ -0.61
SRPK1-201ENST00000346162 KRTAP10-9P60411 292 aa11.21□□□□□ -0.61
SRPK1-201ENST00000346162 UBE2BP63146 152 aa11.21□□□□□ -0.61
SRPK1-201ENST00000346162 NTM-AS1Q6ZSK4 140 aa11.21□□□□□ -0.62
SRPK1-201ENST00000346162 LINC00269Q8N2A0 174 aa11.21□□□□□ -0.62
SRPK1-201ENST00000346162 FAM19A4Q96LR4 140 aa11.21□□□□□ -0.62
SRPK1-201ENST00000346162 ACANP16112 2415 aa11.21□□□□□ -0.62
SRPK1-201ENST00000346162 TRBV6-8A0A0A6YYG3 113 aa11.2□□□□□ -0.62
SRPK1-201ENST00000346162 INAFM1C9JVW0 142 aa11.2□□□□□ -0.62
SRPK1-201ENST00000346162 WFDC10AQ9H1F0 79 aa11.2□□□□□ -0.62
SRPK1-201ENST00000346162 BRI3O95415 125 aa11.2□□□□□ -0.62
SRPK1-201ENST00000346162 LINC00482Q8N8I6 264 aa11.19□□□□□ -0.62
SRPK1-201ENST00000346162 PRYO14603 147 aa11.19□□□□□ -0.62
SRPK1-201ENST00000346162 ESRGQ1W209 222 aa11.19□□□□□ -0.62
SRPK1-201ENST00000346162 MKI67P46013 3256 aaKnown RBP11.18□□□□□ -0.62
SRPK1-201ENST00000346162 TMEM254Q8TBM7 123 aa11.18□□□□□ -0.62
SRPK1-201ENST00000346162 C3orf84H3BNL1 204 aa11.18□□□□□ -0.62
SRPK1-201ENST00000346162 NDUFB1O75438 58 aa11.18□□□□□ -0.62
SRPK1-201ENST00000346162 REG3AQ06141 175 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 209.1 ms