RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 MIR7-3HGQ8N6C7 128 aa9.51□□□□□ -0.89
CASC4-202ENST00000345795 CHCHD7Q9BUK0 85 aa9.51□□□□□ -0.89
CASC4-202ENST00000345795 C9orf66Q5T8R8 295 aa9.51□□□□□ -0.89
CASC4-202ENST00000345795 HIGD1BQ9P298 99 aa9.51□□□□□ -0.89
CASC4-202ENST00000345795 HERVK_113P63121 156 aa9.5□□□□□ -0.89
CASC4-202ENST00000345795 TRAV4A0A0B4J268 109 aa9.5□□□□□ -0.89
CASC4-202ENST00000345795 TRAV25A0A0B4J276 109 aa9.5□□□□□ -0.89
CASC4-202ENST00000345795 IGHV4-28A0A0C4DH34 117 aa9.5□□□□□ -0.89
CASC4-202ENST00000345795 KRTAP10-3P60369 221 aa9.5□□□□□ -0.89
CASC4-202ENST00000345795 TRBV6-5A0A0K0K1A5 114 aa9.5□□□□□ -0.89
CASC4-202ENST00000345795 ATP5G1P05496 136 aa9.5□□□□□ -0.89
CASC4-202ENST00000345795 SS18Q15532 418 aa9.49□□□□□ -0.89
CASC4-202ENST00000345795 NTM-AS1Q6ZSK4 140 aa9.49□□□□□ -0.89
CASC4-202ENST00000345795 TM2D2Q9BX73 214 aa9.49□□□□□ -0.89
CASC4-202ENST00000345795 SLC25A20O43772 301 aa9.49□□□□□ -0.89
CASC4-202ENST00000345795 DNAJC30Q96LL9 226 aa9.49□□□□□ -0.89
CASC4-202ENST00000345795 TRRAPQ9Y4A5 3859 aa9.49□□□□□ -0.89
CASC4-202ENST00000345795 DAZ2Q13117 558 aaKnown RBP9.49□□□□□ -0.89
CASC4-202ENST00000345795 DAZ4Q86SG3 579 aaKnown RBP9.49□□□□□ -0.89
CASC4-202ENST00000345795 DAZ3Q9NR90 486 aaKnown RBP9.49□□□□□ -0.89
CASC4-202ENST00000345795 HIGD2BQ4VC39 106 aa9.48□□□□□ -0.89
CASC4-202ENST00000345795 KRTAP1-1Q07627 177 aa9.48□□□□□ -0.89
CASC4-202ENST00000345795 C9orf116Q5BN46 136 aaPredicted RBP9.48□□□□□ -0.89
CASC4-202ENST00000345795 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.48□□□□□ -0.89
CASC4-202ENST00000345795 EIF4EBP3O60516 100 aaPredicted RBP9.48□□□□□ -0.89
CASC4-202ENST00000345795 PRR3P79522 188 aaKnown RBP9.48□□□□□ -0.89
CASC4-202ENST00000345795 LINC00242Q5T6M2 205 aa9.48□□□□□ -0.89
CASC4-202ENST00000345795 STAB2Q8WWQ8 2551 aa9.48□□□□□ -0.89
CASC4-202ENST00000345795 IGHV4-30-4P0DP06 118 aa9.47□□□□□ -0.89
CASC4-202ENST00000345795 APOC4P55056 127 aa9.47□□□□□ -0.89
CASC4-202ENST00000345795 CMC4P56277 68 aaPredicted RBP9.47□□□□□ -0.89
CASC4-202ENST00000345795 EDA2RQ9HAV5 297 aa9.47□□□□□ -0.89
CASC4-202ENST00000345795 LECT2O14960 151 aa9.46□□□□□ -0.89
CASC4-202ENST00000345795 CLUHP3Q96NS8 147 aa9.46□□□□□ -0.89
CASC4-202ENST00000345795 PKD1L1Q8TDX9 2849 aa9.46□□□□□ -0.9
CASC4-202ENST00000345795 CARD19Q96LW7 228 aa9.46□□□□□ -0.9
CASC4-202ENST00000345795 PRO0255Q9UI72 69 aa9.46□□□□□ -0.9
CASC4-202ENST00000345795 TRBV6-8A0A0A6YYG3 113 aa9.45□□□□□ -0.9
CASC4-202ENST00000345795 Q8N2B8 174 aa9.45□□□□□ -0.9
CASC4-202ENST00000345795 CELA1Q9UNI1 258 aa9.45□□□□□ -0.9
CASC4-202ENST00000345795 RBX1P62877 108 aa9.45□□□□□ -0.9
CASC4-202ENST00000345795 S100A7L2Q5SY68 101 aa9.45□□□□□ -0.9
CASC4-202ENST00000345795 RNF152Q8N8N0 203 aa9.45□□□□□ -0.9
CASC4-202ENST00000345795 TAL2Q16559 108 aa9.45□□□□□ -0.9
CASC4-202ENST00000345795 ANKRD29Q8N6D5 301 aa9.45□□□□□ -0.9
CASC4-202ENST00000345795 SND1-IT1Q9HBX3 110 aa9.45□□□□□ -0.9
CASC4-202ENST00000345795 GAGE2EQ4V326 116 aa9.44□□□□□ -0.9
CASC4-202ENST00000345795 DPH3Q96FX2 82 aa9.44□□□□□ -0.9
CASC4-202ENST00000345795 XAGE1AQ9HD64 81 aa9.44□□□□□ -0.9
CASC4-202ENST00000345795 GAGE2DQ9UEU5 116 aa9.44□□□□□ -0.9
CASC4-202ENST00000345795 IGKV2D-24A0A075B6R9 120 aa9.44□□□□□ -0.9
CASC4-202ENST00000345795 TINCRA0A1B0GVN0 87 aa9.44□□□□□ -0.9
CASC4-202ENST00000345795 PRSS47A8MTI9 375 aa9.44□□□□□ -0.9
CASC4-202ENST00000345795 TRIAP1O43715 76 aa9.44□□□□□ -0.9
CASC4-202ENST00000345795 TEX49A0A1B0GTD5 131 aa9.44□□□□□ -0.9
CASC4-202ENST00000345795 SLPIP03973 132 aa9.44□□□□□ -0.9
CASC4-202ENST00000345795 SPART-AS1P0CW21 52 aa9.44□□□□□ -0.9
CASC4-202ENST00000345795 COX7B2Q8TF08 81 aa9.44□□□□□ -0.9
CASC4-202ENST00000345795 UBE2D1P51668 147 aa9.43□□□□□ -0.9
CASC4-202ENST00000345795 UBE2D3P61077 147 aa9.43□□□□□ -0.9
CASC4-202ENST00000345795 UBE2D2P62837 147 aa9.43□□□□□ -0.9
CASC4-202ENST00000345795 ATXN8Q156A1 80 aa9.43□□□□□ -0.9
CASC4-202ENST00000345795 ZFAND6Q6FIF0 208 aa9.43□□□□□ -0.9
CASC4-202ENST00000345795 SIGMAR1Q99720 223 aa9.43□□□□□ -0.9
CASC4-202ENST00000345795 NCR3O14931 201 aa9.43□□□□□ -0.9
CASC4-202ENST00000345795 ICOSQ9Y6W8 199 aa9.43□□□□□ -0.9
CASC4-202ENST00000345795 GAGE12HA6NDE8 117 aa9.42□□□□□ -0.9
CASC4-202ENST00000345795 FHL3Q13643 280 aa9.42□□□□□ -0.9
CASC4-202ENST00000345795 KLK9Q2XQG4 91 aa9.42□□□□□ -0.9
CASC4-202ENST00000345795 F8W1H4 67 aa9.42□□□□□ -0.9
CASC4-202ENST00000345795 FHL2Q14192 279 aa9.42□□□□□ -0.9
CASC4-202ENST00000345795 CDC42SE2Q9NRR3 84 aa9.42□□□□□ -0.9
CASC4-202ENST00000345795 GIG44P09565 113 aaPredicted RBP9.41□□□□□ -0.9
CASC4-202ENST00000345795 TENM3Q9P273 2699 aa9.41□□□□□ -0.9
CASC4-202ENST00000345795 TRBV10-1A0A0K0K1A3 114 aa9.41□□□□□ -0.9
CASC4-202ENST00000345795 NANOS2P60321 138 aaKnown RBP9.4□□□□□ -0.9
CASC4-202ENST00000345795 TTC32Q5I0X7 151 aa9.4□□□□□ -0.9
CASC4-202ENST00000345795 MRPS36P82909 103 aaKnown RBP9.4□□□□□ -0.9
CASC4-202ENST00000345795 GAGE2AQ6NT46 116 aa9.4□□□□□ -0.9
CASC4-202ENST00000345795 REG3AQ06141 175 aa9.39□□□□□ -0.91
CASC4-202ENST00000345795 MIAQ16674 131 aa9.39□□□□□ -0.91
CASC4-202ENST00000345795 LINC00308Q8TCZ7 52 aa9.39□□□□□ -0.91
CASC4-202ENST00000345795 SMIM1B2RUZ4 78 aa9.38□□□□□ -0.91
CASC4-202ENST00000345795 LINC01620Q4KN68 170 aa9.38□□□□□ -0.91
CASC4-202ENST00000345795 ZNF561-AS1K7EIQ3 104 aa9.38□□□□□ -0.91
CASC4-202ENST00000345795 SNCGO76070 127 aa9.38□□□□□ -0.91
CASC4-202ENST00000345795 CHCHD10Q8WYQ3 142 aaPredicted RBP9.38□□□□□ -0.91
CASC4-202ENST00000345795 G3V4G9 280 aa9.38□□□□□ -0.91
CASC4-202ENST00000345795 TRBV20-1A0A075B6N2 111 aa9.37□□□□□ -0.91
CASC4-202ENST00000345795 TRAV8-4A0A0B4J246 113 aa9.37□□□□□ -0.91
CASC4-202ENST00000345795 COX7A2LO14548 114 aa9.37□□□□□ -0.91
CASC4-202ENST00000345795 UFSP1Q6NVU6 142 aa9.37□□□□□ -0.91
CASC4-202ENST00000345795 Q6ZTC4 211 aa9.37□□□□□ -0.91
CASC4-202ENST00000345795 C6orf223Q8N319 242 aa9.37□□□□□ -0.91
CASC4-202ENST00000345795 A8MTW9 85 aa9.37□□□□□ -0.91
CASC4-202ENST00000345795 SPANXB1Q9NS25 103 aaPredicted RBP9.37□□□□□ -0.91
CASC4-202ENST00000345795 TRBV6-4A0A1B0GX49 114 aa9.37□□□□□ -0.91
CASC4-202ENST00000345795 MRPL23Q16540 153 aaKnown RBP9.36□□□□□ -0.91
CASC4-202ENST00000345795 PYGO1Q9Y3Y4 419 aa9.36□□□□□ -0.91
CASC4-202ENST00000345795 BEAN1Q3B7T3 259 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms