RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 DNAJC9-AS1A6NH13 148 aa12.71□□□□□ -0.37
SPAST-202ENST00000345662 A6NED7 52 aa12.71□□□□□ -0.37
SPAST-202ENST00000345662 PPDPFQ9H3Y8 114 aa12.71□□□□□ -0.37
SPAST-202ENST00000345662 SEC61GP60059 68 aa12.71□□□□□ -0.38
SPAST-202ENST00000345662 SRCAPQ6ZRS2 3230 aa12.71□□□□□ -0.38
SPAST-202ENST00000345662 IGLV1-40P01703 118 aa12.71□□□□□ -0.38
SPAST-202ENST00000345662 Q8N814 137 aa12.71□□□□□ -0.38
SPAST-202ENST00000345662 LOC100131303A0A0U1RQF7 123 aa12.7□□□□□ -0.38
SPAST-202ENST00000345662 M0R378 163 aa12.7□□□□□ -0.38
SPAST-202ENST00000345662 MRGPRG-AS1Q2M3A8 158 aa12.7□□□□□ -0.38
SPAST-202ENST00000345662 CHCHD7Q9BUK0 85 aa12.7□□□□□ -0.38
SPAST-202ENST00000345662 CACNA1AO00555 2505 aa12.7□□□□□ -0.38
SPAST-202ENST00000345662 MUC7Q8TAX7 377 aa12.7□□□□□ -0.38
SPAST-202ENST00000345662 ZNF73O43830 326 aaPredicted RBP12.69□□□□□ -0.38
SPAST-202ENST00000345662 SMCPP49901 116 aaPredicted RBP12.69□□□□□ -0.38
SPAST-202ENST00000345662 IGKV2-24A0A0C4DH68 120 aa12.68□□□□□ -0.38
SPAST-202ENST00000345662 FAM19A1Q7Z5A9 133 aa12.68□□□□□ -0.38
SPAST-202ENST00000345662 SOSTDC1Q6X4U4 206 aa12.68□□□□□ -0.38
SPAST-202ENST00000345662 PRO0461Q9UI25 63 aa12.68□□□□□ -0.38
SPAST-202ENST00000345662 COX6A2Q02221 97 aa12.68□□□□□ -0.38
SPAST-202ENST00000345662 BBC3Q96PG8 261 aaPredicted RBP12.68□□□□□ -0.38
SPAST-202ENST00000345662 CUL9Q8IWT3 2517 aa12.68□□□□□ -0.38
SPAST-202ENST00000345662 LINC01546A6NGU7 62 aa12.67□□□□□ -0.38
SPAST-202ENST00000345662 SHISA2Q6UWI4 295 aa12.67□□□□□ -0.38
SPAST-202ENST00000345662 WFDC13Q8IUB5 93 aa12.67□□□□□ -0.38
SPAST-202ENST00000345662 NOTCH2Q04721 2471 aa12.67□□□□□ -0.38
SPAST-202ENST00000345662 PRORYQ9H606 182 aa12.67□□□□□ -0.38
SPAST-202ENST00000345662 DHRS4-AS1Q9P1J3 65 aa12.67□□□□□ -0.38
SPAST-202ENST00000345662 SYCNQ0VAF6 134 aa12.67□□□□□ -0.38
SPAST-202ENST00000345662 FAM30AQ9NZY2 134 aa12.66□□□□□ -0.38
SPAST-202ENST00000345662 CPAMD8Q8IZJ3 1885 aa12.66□□□□□ -0.38
SPAST-202ENST00000345662 A0A096LNI7 61 aa12.65□□□□□ -0.38
SPAST-202ENST00000345662 AGRNO00468 2067 aa12.65□□□□□ -0.38
SPAST-202ENST00000345662 DSCAMO60469 2012 aa12.65□□□□□ -0.38
SPAST-202ENST00000345662 IGKV2-28A0A075B6P5 120 aa12.65□□□□□ -0.39
SPAST-202ENST00000345662 IGKV2D-28P01615 120 aa12.65□□□□□ -0.39
SPAST-202ENST00000345662 C19orf84I3L1E1 186 aa12.64□□□□□ -0.39
SPAST-202ENST00000345662 Q8N3U1 123 aa12.64□□□□□ -0.39
SPAST-202ENST00000345662 LINC00846Q9NV44 126 aa12.64□□□□□ -0.39
SPAST-202ENST00000345662 J3QKU1 62 aa12.63□□□□□ -0.39
SPAST-202ENST00000345662 CELA1Q9UNI1 258 aa12.63□□□□□ -0.39
SPAST-202ENST00000345662 HIVEP2P31629 2446 aa12.62□□□□□ -0.39
SPAST-202ENST00000345662 A0A087WZ39 114 aa12.62□□□□□ -0.39
SPAST-202ENST00000345662 PRYO14603 147 aa12.62□□□□□ -0.39
SPAST-202ENST00000345662 ZNF702PQ9H963 129 aa12.61□□□□□ -0.39
SPAST-202ENST00000345662 PTPRSQ13332 1948 aa12.61□□□□□ -0.39
SPAST-202ENST00000345662 SONP18583 2426 aaKnown RBP12.61□□□□□ -0.39
SPAST-202ENST00000345662 IGHV4-31P0DP07 118 aa12.6□□□□□ -0.39
SPAST-202ENST00000345662 PRR15LQ9BU68 103 aa12.6□□□□□ -0.39
SPAST-202ENST00000345662 LRCOL1A6NCL2 159 aa12.6□□□□□ -0.39
SPAST-202ENST00000345662 A0A0J9YWU9 116 aa12.59□□□□□ -0.39
SPAST-202ENST00000345662 PMAIP1Q13794 54 aa12.59□□□□□ -0.39
SPAST-202ENST00000345662 C14orf177Q52M58 125 aa12.59□□□□□ -0.39
SPAST-202ENST00000345662 C11orf45Q8TAV5 145 aa12.59□□□□□ -0.39
SPAST-202ENST00000345662 CYSRT1A8MQ03 144 aa12.58□□□□□ -0.4
SPAST-202ENST00000345662 CRYGAP11844 174 aa12.58□□□□□ -0.4
SPAST-202ENST00000345662 EDN2P20800 178 aa12.58□□□□□ -0.4
SPAST-202ENST00000345662 CASC2Q6XLA1 102 aa12.58□□□□□ -0.4
SPAST-202ENST00000345662 LELP1Q5T871 98 aa12.58□□□□□ -0.4
SPAST-202ENST00000345662 OTOGLQ3ZCN5 2332 aa12.57□□□□□ -0.4
SPAST-202ENST00000345662 PRR3P79522 188 aaKnown RBP12.56□□□□□ -0.4
SPAST-202ENST00000345662 C18orf65Q6ZTR6 163 aa12.55□□□□□ -0.4
SPAST-202ENST00000345662 ZNF843Q8N446 348 aa12.55□□□□□ -0.4
SPAST-202ENST00000345662 Q8N9L7 120 aa12.55□□□□□ -0.4
SPAST-202ENST00000345662 LRP4O75096 1905 aa12.55□□□□□ -0.4
SPAST-202ENST00000345662 MYO18BQ8IUG5 2567 aa12.55□□□□□ -0.4
SPAST-202ENST00000345662 UNQ6190/PRO20217Q6UXQ8 127 aa12.55□□□□□ -0.4
SPAST-202ENST00000345662 PRO0628Q9UI54 55 aa12.55□□□□□ -0.4
SPAST-202ENST00000345662 KIF25-AS1Q9Y6Z4 181 aa12.55□□□□□ -0.4
SPAST-202ENST00000345662 C4orf48Q5BLP8 95 aa12.54□□□□□ -0.4
SPAST-202ENST00000345662 LINC00482Q8N8I6 264 aa12.54□□□□□ -0.4
SPAST-202ENST00000345662 TRBV10-3A0A0K0K1G6 114 aa12.54□□□□□ -0.4
SPAST-202ENST00000345662 HILS1P60008 231 aa12.54□□□□□ -0.4
SPAST-202ENST00000345662 SBSPONQ8IVN8 264 aa12.54□□□□□ -0.4
SPAST-202ENST00000345662 TMEM254Q8TBM7 123 aa12.54□□□□□ -0.4
SPAST-202ENST00000345662 WFDC10AQ9H1F0 79 aa12.54□□□□□ -0.4
SPAST-202ENST00000345662 PRRC2AP48634 2157 aaKnown RBP12.53□□□□□ -0.4
SPAST-202ENST00000345662 IGLV4-60A0A075B6I1 120 aa12.53□□□□□ -0.4
SPAST-202ENST00000345662 RPS28P62857 69 aaKnown RBP12.53□□□□□ -0.4
SPAST-202ENST00000345662 MYO9AB2RTY4 2548 aa12.53□□□□□ -0.4
SPAST-202ENST00000345662 DEFB131BA0A096LNP1 70 aa12.53□□□□□ -0.4
SPAST-202ENST00000345662 C9orf116Q5BN46 136 aaPredicted RBP12.53□□□□□ -0.4
SPAST-202ENST00000345662 Q6ZVQ6 151 aa12.53□□□□□ -0.4
SPAST-202ENST00000345662 CEP192Q8TEP8 1941 aa12.52□□□□□ -0.4
SPAST-202ENST00000345662 TRBV7-6A0A0J9YX20 115 aa12.52□□□□□ -0.41
SPAST-202ENST00000345662 LINC00337Q8N6G1 96 aa12.52□□□□□ -0.41
SPAST-202ENST00000345662 COL5A1P20908 1838 aaPredicted RBP12.51□□□□□ -0.41
SPAST-202ENST00000345662 LINC00208Q96KT6 92 aa12.5□□□□□ -0.41
SPAST-202ENST00000345662 ODF3L2Q3SX64 289 aa12.5□□□□□ -0.41
SPAST-202ENST00000345662 BRI3O95415 125 aa12.5□□□□□ -0.41
SPAST-202ENST00000345662 LINC01547P58512 204 aaPredicted RBP12.5□□□□□ -0.41
SPAST-202ENST00000345662 NAV2Q8IVL1 2488 aa12.5□□□□□ -0.41
SPAST-202ENST00000345662 BEAN1Q3B7T3 259 aa12.5□□□□□ -0.41
SPAST-202ENST00000345662 Q6ZSN1 163 aa12.5□□□□□ -0.41
SPAST-202ENST00000345662 RPL37AP8A6NKH3 93 aa12.49□□□□□ -0.41
SPAST-202ENST00000345662 C1orf137Q5JT78 98 aa12.48□□□□□ -0.41
SPAST-202ENST00000345662 KIR2DL5BQ8NHK3 375 aa12.48□□□□□ -0.41
SPAST-202ENST00000345662 PIEZO2Q9H5I5 2752 aa12.48□□□□□ -0.41
SPAST-202ENST00000345662 WDR87Q6ZQQ6 2873 aa12.48□□□□□ -0.41
SPAST-202ENST00000345662 TET2Q6N021 2002 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms