RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 Q0VG73 95 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 TWIST1Q15672 202 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 PDZD11Q5EBL8 140 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 SMIM2Q9BVW6 85 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 SMCO4Q9NRQ5 59 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
CCDC66-202ENST00000341455 LOC105371267A0A1B0GV96 52 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 DEFB130BP0DP73 79 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 DEFB130AP0DP74 79 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 S100A1P23297 94 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 S100PP25815 95 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 Q6ZN92 141 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 ORMDL3Q8N138 153 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 NXT2Q9NPJ8 142 aaKnown RBP2.33□□□□□ -2.04
CCDC66-202ENST00000341455 SPANXA1Q9NS26 97 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 COX11Q9Y6N1 276 aa2.33□□□□□ -2.04
CCDC66-202ENST00000341455 SMIM17P0DL12 118 aa2.32□□□□□ -2.04
CCDC66-202ENST00000341455 INAFM2P0DMQ5 153 aa2.32□□□□□ -2.04
CCDC66-202ENST00000341455 NTN5Q8WTR8 489 aaPredicted RBP2.32□□□□□ -2.04
CCDC66-202ENST00000341455 STAB2Q8WWQ8 2551 aa2.32□□□□□ -2.04
CCDC66-202ENST00000341455 TRAV8-4A0A0B4J246 113 aa2.32□□□□□ -2.04
CCDC66-202ENST00000341455 TRAV8-6A0A0B4J262 113 aa2.32□□□□□ -2.04
CCDC66-202ENST00000341455 PRSS1P07477 247 aa2.32□□□□□ -2.04
CCDC66-202ENST00000341455 ZFAND6Q6FIF0 208 aa2.32□□□□□ -2.04
CCDC66-202ENST00000341455 Q6ZRP5 223 aa2.32□□□□□ -2.04
CCDC66-202ENST00000341455 STPG4Q8N801 248 aa2.32□□□□□ -2.04
CCDC66-202ENST00000341455 TOMM6Q96B49 74 aa2.32□□□□□ -2.04
CCDC66-202ENST00000341455 CHCHD1Q96BP2 118 aaKnown RBP2.32□□□□□ -2.04
CCDC66-202ENST00000341455 AMELXQ99217 191 aa2.32□□□□□ -2.04
CCDC66-202ENST00000341455 TIMM17AQ99595 171 aa2.32□□□□□ -2.04
CCDC66-202ENST00000341455 KRTAP1-5Q9BYS1 174 aa2.32□□□□□ -2.04
CCDC66-202ENST00000341455 ST20Q9HBF5 79 aa2.32□□□□□ -2.04
CCDC66-202ENST00000341455 NBEAL2Q6ZNJ1 2754 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 TMSB15BA0A087X1C1 80 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 LRCOL1A6NCL2 159 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 IGLL5B9A064 214 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 ZNF56Q15929 161 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 C20orf203Q8NBC4 194 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 UBE2D4Q9Y2X8 147 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 TENM2Q9NT68 2774 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 DNAH5Q8TE73 4624 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 TRBV25-1A0A075B6N4 114 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 TRAV9-2A0A087WT02 112 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 SDHAF1A6NFY7 115 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 IGIPA6NJ69 53 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 TMEM238C9JI98 176 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 NPYP01303 97 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 RAB5AP20339 215 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 RPS10P46783 165 aaKnown RBP2.31□□□□□ -2.04
CCDC66-202ENST00000341455 CD164Q04900 197 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 MIAQ16674 131 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 ORMDL2Q53FV1 153 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 ZNF664Q8N3J9 261 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.31□□□□□ -2.04
CCDC66-202ENST00000341455 OR5A1Q8NGJ0 315 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 MYCBP2O75592 4640 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 D6R8Y8 96 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 APCSP02743 223 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 PRB4P10163 310 aaPredicted RBP2.31□□□□□ -2.04
CCDC66-202ENST00000341455 CIRBPQ14011 172 aaKnown RBP2.31□□□□□ -2.04
CCDC66-202ENST00000341455 Q6ZVH6 145 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 C6orf223Q8N319 242 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 RPL39LQ96EH5 51 aaKnown RBP2.31□□□□□ -2.04
CCDC66-202ENST00000341455 TMEM141Q96I45 108 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 PRELID3AQ96N28 172 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 TMEM243Q9BU79 118 aa2.31□□□□□ -2.04
CCDC66-202ENST00000341455 A0A096LNJ9 63 aa2.3□□□□□ -2.04
CCDC66-202ENST00000341455 TRAV8-3A0A0A6YYJ7 113 aa2.3□□□□□ -2.04
CCDC66-202ENST00000341455 GAS8-AS1O95177 125 aa2.3□□□□□ -2.04
CCDC66-202ENST00000341455 CNBPP62633 177 aaKnown RBP2.3□□□□□ -2.04
CCDC66-202ENST00000341455 ENHOQ6UWT2 76 aa2.3□□□□□ -2.04
CCDC66-202ENST00000341455 CHCHD10Q8WYQ3 142 aaPredicted RBP2.3□□□□□ -2.04
CCDC66-202ENST00000341455 RMI2Q96E14 147 aa2.3□□□□□ -2.04
CCDC66-202ENST00000341455 MAP1LC3AQ9H492 121 aa2.3□□□□□ -2.04
CCDC66-202ENST00000341455 CDC42SE2Q9NRR3 84 aa2.3□□□□□ -2.04
CCDC66-202ENST00000341455 HMCN2Q8NDA2 5059 aa2.3□□□□□ -2.04
CCDC66-202ENST00000341455 GVQW2A0A096LPI5 108 aaPredicted RBP2.3□□□□□ -2.04
CCDC66-202ENST00000341455 TGIF2-C20orf24A0A0A6YYL0 155 aa2.3□□□□□ -2.04
CCDC66-202ENST00000341455 TRAV12-1A0A0B4J245 112 aa2.3□□□□□ -2.04
CCDC66-202ENST00000341455 RPL18AQ02543 176 aaKnown RBP2.3□□□□□ -2.04
CCDC66-202ENST00000341455 REG3GQ6UW15 175 aa2.3□□□□□ -2.04
CCDC66-202ENST00000341455 Q6ZSA8 131 aa2.3□□□□□ -2.04
CCDC66-202ENST00000341455 LINC00173Q6ZV60 143 aa2.3□□□□□ -2.04
CCDC66-202ENST00000341455 WFDC10BQ8IUB3 73 aa2.3□□□□□ -2.04
CCDC66-202ENST00000341455 C18orf32Q8TCD1 76 aa2.3□□□□□ -2.04
CCDC66-202ENST00000341455 RPS10P5Q9NQ39 176 aa2.3□□□□□ -2.04
CCDC66-202ENST00000341455 HTN1P15515 57 aa2.29□□□□□ -2.04
CCDC66-202ENST00000341455 FCER1GP30273 86 aa2.29□□□□□ -2.04
CCDC66-202ENST00000341455 CKS2P33552 79 aa2.29□□□□□ -2.04
CCDC66-202ENST00000341455 NDUFV3P56181 108 aaKnown RBP2.29□□□□□ -2.04
CCDC66-202ENST00000341455 RAB5BP61020 215 aa2.29□□□□□ -2.04
CCDC66-202ENST00000341455 SPATA12Q7Z6I5 190 aa2.29□□□□□ -2.04
CCDC66-202ENST00000341455 KIR2DL4Q99706 377 aa2.29□□□□□ -2.04
CCDC66-202ENST00000341455 A0A0J9YY99 117 aa2.29□□□□□ -2.04
CCDC66-202ENST00000341455 LY6G6CO95867 125 aa2.29□□□□□ -2.04
CCDC66-202ENST00000341455 APOC3P02656 99 aa2.29□□□□□ -2.04
CCDC66-202ENST00000341455 RBX1P62877 108 aa2.29□□□□□ -2.04
CCDC66-202ENST00000341455 MRPL54Q6P161 138 aaKnown RBP2.29□□□□□ -2.04
CCDC66-202ENST00000341455 MRPL55Q7Z7F7 128 aaKnown RBP2.29□□□□□ -2.04
CCDC66-202ENST00000341455 TRAV26-2A0A0B4J265 109 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms