RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 A0A1B0GUV1 79 aa7.53□□□□□ -1.2
TRAF3IP2-201ENST00000340026 TEN1Q86WV5 123 aa7.53□□□□□ -1.2
TRAF3IP2-201ENST00000340026 CITED1Q99966 193 aa7.53□□□□□ -1.2
TRAF3IP2-201ENST00000340026 MTORP42345 2549 aa7.52□□□□□ -1.21
TRAF3IP2-201ENST00000340026 FOXI1Q12951 378 aa7.52□□□□□ -1.21
TRAF3IP2-201ENST00000340026 ATXN8Q156A1 80 aa7.52□□□□□ -1.21
TRAF3IP2-201ENST00000340026 WFDC9Q8NEX5 89 aa7.52□□□□□ -1.21
TRAF3IP2-201ENST00000340026 Q9H8V8 135 aa7.52□□□□□ -1.21
TRAF3IP2-201ENST00000340026 SH2D6Q7Z4S9 175 aa7.51□□□□□ -1.21
TRAF3IP2-201ENST00000340026 LINC00308Q8TCZ7 52 aa7.51□□□□□ -1.21
TRAF3IP2-201ENST00000340026 A8MZ25 164 aa7.51□□□□□ -1.21
TRAF3IP2-201ENST00000340026 CRLF1O75462 422 aa7.51□□□□□ -1.21
TRAF3IP2-201ENST00000340026 PPDPFLQ8WWR9 84 aa7.51□□□□□ -1.21
TRAF3IP2-201ENST00000340026 IGHV3OR16-9A0A0B4J2B5 98 aa7.5□□□□□ -1.21
TRAF3IP2-201ENST00000340026 LOC100131303A0A0U1RQF7 123 aa7.5□□□□□ -1.21
TRAF3IP2-201ENST00000340026 SCGB1C2P0DMR2 95 aa7.5□□□□□ -1.21
TRAF3IP2-201ENST00000340026 SCGB1A1P11684 91 aa7.5□□□□□ -1.21
TRAF3IP2-201ENST00000340026 APOC4P55056 127 aa7.5□□□□□ -1.21
TRAF3IP2-201ENST00000340026 PRO0255Q9UI72 69 aa7.5□□□□□ -1.21
TRAF3IP2-201ENST00000340026 ICOSQ9Y6W8 199 aa7.5□□□□□ -1.21
TRAF3IP2-201ENST00000340026 TRAV26-1A0A087WT03 109 aa7.5□□□□□ -1.21
TRAF3IP2-201ENST00000340026 TRAV13-1A0A0B4J241 112 aa7.5□□□□□ -1.21
TRAF3IP2-201ENST00000340026 PRSS2P07478 247 aa7.5□□□□□ -1.21
TRAF3IP2-201ENST00000340026 A0A087WZ39 114 aa7.49□□□□□ -1.21
TRAF3IP2-201ENST00000340026 TRIAP1O43715 76 aa7.49□□□□□ -1.21
TRAF3IP2-201ENST00000340026 COX6CP09669 75 aa7.49□□□□□ -1.21
TRAF3IP2-201ENST00000340026 INAFM1C9JVW0 142 aa7.48□□□□□ -1.21
TRAF3IP2-201ENST00000340026 FAM222AQ5U5X8 452 aa7.48□□□□□ -1.21
TRAF3IP2-201ENST00000340026 FASNP49327 2511 aaKnown RBP7.48□□□□□ -1.21
TRAF3IP2-201ENST00000340026 GAGE12HA6NDE8 117 aa7.48□□□□□ -1.21
TRAF3IP2-201ENST00000340026 SLC25A20O43772 301 aa7.48□□□□□ -1.21
TRAF3IP2-201ENST00000340026 LINC01620Q4KN68 170 aa7.48□□□□□ -1.21
TRAF3IP2-201ENST00000340026 TRBV10-2A0A0K0K1G8 114 aa7.48□□□□□ -1.21
TRAF3IP2-201ENST00000340026 RPL13AP40429 203 aaKnown RBP7.48□□□□□ -1.21
TRAF3IP2-201ENST00000340026 SHISA2Q6UWI4 295 aa7.48□□□□□ -1.21
TRAF3IP2-201ENST00000340026 PRIMA1Q86XR5 153 aa7.48□□□□□ -1.21
TRAF3IP2-201ENST00000340026 JMJD1CQ15652 2540 aa7.47□□□□□ -1.21
TRAF3IP2-201ENST00000340026 OTOGQ6ZRI0 2925 aa7.47□□□□□ -1.21
TRAF3IP2-201ENST00000340026 H3BT86 120 aa7.47□□□□□ -1.21
TRAF3IP2-201ENST00000340026 MIFP14174 115 aa7.47□□□□□ -1.21
TRAF3IP2-201ENST00000340026 COX7B2Q8TF08 81 aa7.47□□□□□ -1.21
TRAF3IP2-201ENST00000340026 NSD1Q96L73 2696 aaPredicted RBP7.47□□□□□ -1.21
TRAF3IP2-201ENST00000340026 IGLV4-60A0A075B6I1 120 aa7.47□□□□□ -1.21
TRAF3IP2-201ENST00000340026 LST1O00453 97 aa7.47□□□□□ -1.21
TRAF3IP2-201ENST00000340026 GAGE6Q13070 117 aa7.46□□□□□ -1.21
TRAF3IP2-201ENST00000340026 Q1RN00 199 aa7.46□□□□□ -1.21
TRAF3IP2-201ENST00000340026 ANKRD29Q8N6D5 301 aa7.46□□□□□ -1.21
TRAF3IP2-201ENST00000340026 NIPBLQ6KC79 2804 aaeCLIP7.46□□□□□ -1.22
TRAF3IP2-201ENST00000340026 IBA57-AS1B1ANH7 110 aa7.46□□□□□ -1.22
TRAF3IP2-201ENST00000340026 GYPEP15421 78 aa7.46□□□□□ -1.22
TRAF3IP2-201ENST00000340026 CARD19Q96LW7 228 aa7.46□□□□□ -1.22
TRAF3IP2-201ENST00000340026 CHCHD5Q9BSY4 110 aa7.46□□□□□ -1.22
TRAF3IP2-201ENST00000340026 LINC00959A0A1B0GUT2 108 aa7.45□□□□□ -1.22
TRAF3IP2-201ENST00000340026 SOSTDC1Q6X4U4 206 aa7.45□□□□□ -1.22
TRAF3IP2-201ENST00000340026 SIGMAR1Q99720 223 aa7.45□□□□□ -1.22
TRAF3IP2-201ENST00000340026 GCN1Q92616 2671 aaKnown RBP7.45□□□□□ -1.22
TRAF3IP2-201ENST00000340026 NOTCH3Q9UM47 2321 aa7.45□□□□□ -1.22
TRAF3IP2-201ENST00000340026 MTURNQ8N3F0 131 aa7.45□□□□□ -1.22
TRAF3IP2-201ENST00000340026 C9JAW5 83 aa7.44□□□□□ -1.22
TRAF3IP2-201ENST00000340026 DEFB130BP0DP73 79 aa7.44□□□□□ -1.22
TRAF3IP2-201ENST00000340026 DEFB130AP0DP74 79 aa7.44□□□□□ -1.22
TRAF3IP2-201ENST00000340026 Q8NAQ8 132 aa7.44□□□□□ -1.22
TRAF3IP2-201ENST00000340026 SETD2Q9BYW2 2564 aaPredicted RBP7.44□□□□□ -1.22
TRAF3IP2-201ENST00000340026 TMEM262E9PQX1 116 aa7.44□□□□□ -1.22
TRAF3IP2-201ENST00000340026 MEIG1Q5JSS6 88 aa7.44□□□□□ -1.22
TRAF3IP2-201ENST00000340026 TRAV13-2A0A0B4J235 113 aa7.43□□□□□ -1.22
TRAF3IP2-201ENST00000340026 COX7A2LO14548 114 aa7.43□□□□□ -1.22
TRAF3IP2-201ENST00000340026 DEFB121Q5J5C9 76 aa7.43□□□□□ -1.22
TRAF3IP2-201ENST00000340026 Q8IZM0 81 aa7.43□□□□□ -1.22
TRAF3IP2-201ENST00000340026 C2CD3Q4AC94 2353 aa7.43□□□□□ -1.22
TRAF3IP2-201ENST00000340026 PAX4O43316 350 aa7.42□□□□□ -1.22
TRAF3IP2-201ENST00000340026 SPATA3Q8NHX4 192 aa7.42□□□□□ -1.22
TRAF3IP2-201ENST00000340026 SS18Q15532 418 aa7.42□□□□□ -1.22
TRAF3IP2-201ENST00000340026 CDIP1Q9H305 208 aa7.42□□□□□ -1.22
TRAF3IP2-201ENST00000340026 IGHV4-28A0A0C4DH34 117 aa7.42□□□□□ -1.22
TRAF3IP2-201ENST00000340026 H7C2G1 150 aa7.42□□□□□ -1.22
TRAF3IP2-201ENST00000340026 DAND5Q8N907 189 aa7.42□□□□□ -1.22
TRAF3IP2-201ENST00000340026 RPL28P46779 137 aaKnown RBP7.41□□□□□ -1.22
TRAF3IP2-201ENST00000340026 TRACP01848 142 aa7.41□□□□□ -1.22
TRAF3IP2-201ENST00000340026 ATP5G1P05496 136 aa7.41□□□□□ -1.22
TRAF3IP2-201ENST00000340026 CXCL5P42830 114 aa7.4□□□□□ -1.22
TRAF3IP2-201ENST00000340026 MUC7Q8TAX7 377 aa7.4□□□□□ -1.22
TRAF3IP2-201ENST00000340026 NPC2P61916 151 aa7.4□□□□□ -1.23
TRAF3IP2-201ENST00000340026 DEFB135Q30KP9 77 aa7.4□□□□□ -1.23
TRAF3IP2-201ENST00000340026 FN1P02751 2386 aaKnown RBP7.39□□□□□ -1.23
TRAF3IP2-201ENST00000340026 SPART-AS1P0CW21 52 aa7.39□□□□□ -1.23
TRAF3IP2-201ENST00000340026 DAD1P61803 113 aa7.39□□□□□ -1.23
TRAF3IP2-201ENST00000340026 CD164L2Q6UWJ8 174 aa7.39□□□□□ -1.23
TRAF3IP2-201ENST00000340026 H3BNG1 76 aa7.39□□□□□ -1.23
TRAF3IP2-201ENST00000340026 COX17Q14061 63 aa7.39□□□□□ -1.23
TRAF3IP2-201ENST00000340026 FAM240AA0A1B0GVK7 77 aa7.38□□□□□ -1.23
TRAF3IP2-201ENST00000340026 MIR7-3HGQ8N6C7 128 aa7.38□□□□□ -1.23
TRAF3IP2-201ENST00000340026 MRPL23Q16540 153 aaKnown RBP7.38□□□□□ -1.23
TRAF3IP2-201ENST00000340026 LELP1Q5T871 98 aa7.38□□□□□ -1.23
TRAF3IP2-201ENST00000340026 C2orf82Q6UX34 121 aa7.38□□□□□ -1.23
TRAF3IP2-201ENST00000340026 NOTCH2Q04721 2471 aa7.38□□□□□ -1.23
TRAF3IP2-201ENST00000340026 UBE2WQ96B02 151 aa7.37□□□□□ -1.23
TRAF3IP2-201ENST00000340026 IGKV2-28A0A075B6P5 120 aa7.37□□□□□ -1.23
TRAF3IP2-201ENST00000340026 IGKV2D-28P01615 120 aa7.37□□□□□ -1.23
TRAF3IP2-201ENST00000340026 IGHV4-30-4P0DP06 118 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms