RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 CMC4P56277 68 aaPredicted RBP13.38□□□□□ -0.27
RFTN1-201ENST00000334133 IGLV5-45A0A087WSX0 123 aa13.37□□□□□ -0.27
RFTN1-201ENST00000334133 INAFM1C9JVW0 142 aa13.37□□□□□ -0.27
RFTN1-201ENST00000334133 TRBV20-1A0A075B6N2 111 aa13.37□□□□□ -0.27
RFTN1-201ENST00000334133 SMAGPQ0VAQ4 97 aa13.37□□□□□ -0.27
RFTN1-201ENST00000334133 DEFB4AO15263 64 aa13.36□□□□□ -0.27
RFTN1-201ENST00000334133 FHL2Q14192 279 aa13.36□□□□□ -0.27
RFTN1-201ENST00000334133 CARD19Q96LW7 228 aa13.36□□□□□ -0.27
RFTN1-201ENST00000334133 SPANXDQ9BXN6 97 aa13.36□□□□□ -0.27
RFTN1-201ENST00000334133 SPANXCQ9NY87 97 aa13.36□□□□□ -0.27
RFTN1-201ENST00000334133 A0A096LPF7 62 aa13.35□□□□□ -0.27
RFTN1-201ENST00000334133 IGLV4-60A0A075B6I1 120 aa13.35□□□□□ -0.27
RFTN1-201ENST00000334133 NDUFA1O15239 70 aa13.35□□□□□ -0.27
RFTN1-201ENST00000334133 ANKRD29Q8N6D5 301 aa13.35□□□□□ -0.27
RFTN1-201ENST00000334133 CHCHD5Q9BSY4 110 aa13.35□□□□□ -0.27
RFTN1-201ENST00000334133 PRIMA1Q86XR5 153 aa13.34□□□□□ -0.27
RFTN1-201ENST00000334133 OVOL2Q9BRP0 275 aa13.34□□□□□ -0.27
RFTN1-201ENST00000334133 SLC25A20O43772 301 aa13.33□□□□□ -0.28
RFTN1-201ENST00000334133 MEIG1Q5JSS6 88 aa13.33□□□□□ -0.28
RFTN1-201ENST00000334133 TOMM7Q9P0U1 55 aa13.33□□□□□ -0.28
RFTN1-201ENST00000334133 IGLV5-39A0A0G2JS06 123 aa13.33□□□□□ -0.28
RFTN1-201ENST00000334133 TRBV6-4A0A1B0GX49 114 aa13.33□□□□□ -0.28
RFTN1-201ENST00000334133 CLEC2BQ92478 149 aa13.33□□□□□ -0.28
RFTN1-201ENST00000334133 TEP1Q99973 2627 aaKnown RBP13.32□□□□□ -0.28
RFTN1-201ENST00000334133 FAM110AQ9BQ89 295 aa13.32□□□□□ -0.28
RFTN1-201ENST00000334133 CSDC2Q9Y534 153 aaKnown RBP13.32□□□□□ -0.28
RFTN1-201ENST00000334133 F5H768 121 aa13.32□□□□□ -0.28
RFTN1-201ENST00000334133 RPL13AP40429 203 aaKnown RBP13.32□□□□□ -0.28
RFTN1-201ENST00000334133 TEN1Q86WV5 123 aa13.32□□□□□ -0.28
RFTN1-201ENST00000334133 ICOSQ9Y6W8 199 aa13.32□□□□□ -0.28
RFTN1-201ENST00000334133 SIGMAR1Q99720 223 aa13.31□□□□□ -0.28
RFTN1-201ENST00000334133 CIRBPQ14011 172 aaKnown RBP13.3□□□□□ -0.28
RFTN1-201ENST00000334133 SOSTDC1Q6X4U4 206 aa13.3□□□□□ -0.28
RFTN1-201ENST00000334133 LINC00308Q8TCZ7 52 aa13.3□□□□□ -0.28
RFTN1-201ENST00000334133 TRBV6-8A0A0A6YYG3 113 aa13.29□□□□□ -0.28
RFTN1-201ENST00000334133 LINC01620Q4KN68 170 aa13.28□□□□□ -0.28
RFTN1-201ENST00000334133 CLPSL2Q6UWE3 100 aa13.28□□□□□ -0.28
RFTN1-201ENST00000334133 GYPEP15421 78 aa13.27□□□□□ -0.28
RFTN1-201ENST00000334133 ATXN8Q156A1 80 aa13.27□□□□□ -0.28
RFTN1-201ENST00000334133 TRBV30A0A0K0K1B3 111 aa13.27□□□□□ -0.29
RFTN1-201ENST00000334133 DEFB135Q30KP9 77 aa13.27□□□□□ -0.29
RFTN1-201ENST00000334133 C5orf38Q86SI9 138 aa13.27□□□□□ -0.29
RFTN1-201ENST00000334133 PPDPFLQ8WWR9 84 aa13.27□□□□□ -0.29
RFTN1-201ENST00000334133 TMEM262E9PQX1 116 aa13.26□□□□□ -0.29
RFTN1-201ENST00000334133 SPATA25Q9BR10 227 aa13.26□□□□□ -0.29
RFTN1-201ENST00000334133 C11orf68Q9H3H3 251 aaKnown RBP13.26□□□□□ -0.29
RFTN1-201ENST00000334133 ATP6V0E2Q8NHE4 81 aa13.26□□□□□ -0.29
RFTN1-201ENST00000334133 X6R8D5 127 aa13.26□□□□□ -0.29
RFTN1-201ENST00000334133 NTN5Q8WTR8 489 aaPredicted RBP13.26□□□□□ -0.29
RFTN1-201ENST00000334133 TIMM17BO60830 172 aa13.25□□□□□ -0.29
RFTN1-201ENST00000334133 FAM19A3Q7Z5A8 133 aa13.24□□□□□ -0.29
RFTN1-201ENST00000334133 CDIP1Q9H305 208 aa13.24□□□□□ -0.29
RFTN1-201ENST00000334133 FAM222AQ5U5X8 452 aa13.23□□□□□ -0.29
RFTN1-201ENST00000334133 IFITM1P13164 125 aa13.23□□□□□ -0.29
RFTN1-201ENST00000334133 TEX49A0A1B0GTD5 131 aa13.23□□□□□ -0.29
RFTN1-201ENST00000334133 COX6CP09669 75 aa13.21□□□□□ -0.29
RFTN1-201ENST00000334133 FLNBO75369 2602 aaKnown RBP13.21□□□□□ -0.29
RFTN1-201ENST00000334133 COX7B2Q8TF08 81 aa13.21□□□□□ -0.29
RFTN1-201ENST00000334133 XCL1P47992 114 aa13.2□□□□□ -0.3
RFTN1-201ENST00000334133 Q8N3U1 123 aa13.2□□□□□ -0.3
RFTN1-201ENST00000334133 H7C423 109 aa13.19□□□□□ -0.3
RFTN1-201ENST00000334133 MT-ATP8P03928 68 aa13.19□□□□□ -0.3
RFTN1-201ENST00000334133 C2orf82Q6UX34 121 aa13.19□□□□□ -0.3
RFTN1-201ENST00000334133 MIR7-3HGQ8N6C7 128 aa13.19□□□□□ -0.3
RFTN1-201ENST00000334133 PFN2P35080 140 aa13.18□□□□□ -0.3
RFTN1-201ENST00000334133 KIR2DL5BQ8NHK3 375 aa13.18□□□□□ -0.3
RFTN1-201ENST00000334133 IGHV3OR16-9A0A0B4J2B5 98 aa13.18□□□□□ -0.3
RFTN1-201ENST00000334133 XGP55808 180 aa13.18□□□□□ -0.3
RFTN1-201ENST00000334133 TRBV10-2A0A0K0K1G8 114 aa13.17□□□□□ -0.3
RFTN1-201ENST00000334133 LINC00158P58513 81 aa13.17□□□□□ -0.3
RFTN1-201ENST00000334133 CIDEAO60543 219 aa13.17□□□□□ -0.3
RFTN1-201ENST00000334133 LINC00959A0A1B0GUT2 108 aa13.16□□□□□ -0.3
RFTN1-201ENST00000334133 C9orf66Q5T8R8 295 aa13.16□□□□□ -0.3
RFTN1-201ENST00000334133 PAX4O43316 350 aa13.16□□□□□ -0.3
RFTN1-201ENST00000334133 HTN3P15516 51 aa13.16□□□□□ -0.3
RFTN1-201ENST00000334133 PRO0255Q9UI72 69 aa13.15□□□□□ -0.3
RFTN1-201ENST00000334133 LST1O00453 97 aa13.14□□□□□ -0.31
RFTN1-201ENST00000334133 HERV-K104P63124 156 aa13.14□□□□□ -0.31
RFTN1-201ENST00000334133 RNF183Q96D59 192 aa13.14□□□□□ -0.31
RFTN1-201ENST00000334133 F8P00451 2351 aa13.14□□□□□ -0.31
RFTN1-201ENST00000334133 LINC00612Q8N6U2 182 aa13.14□□□□□ -0.31
RFTN1-201ENST00000334133 CELA1Q9UNI1 258 aa13.14□□□□□ -0.31
RFTN1-201ENST00000334133 IGLV10-54A0A075B6I4 117 aa13.14□□□□□ -0.31
RFTN1-201ENST00000334133 IGHV4-28A0A0C4DH34 117 aa13.14□□□□□ -0.31
RFTN1-201ENST00000334133 A0A087WZ39 114 aa13.11□□□□□ -0.31
RFTN1-201ENST00000334133 UBE2WQ96B02 151 aa13.11□□□□□ -0.31
RFTN1-201ENST00000334133 C6orf226Q5I0X4 101 aa13.1□□□□□ -0.31
RFTN1-201ENST00000334133 LINC00269Q8N2A0 174 aa13.1□□□□□ -0.31
RFTN1-201ENST00000334133 SND1-IT1Q9HBX3 110 aa13.1□□□□□ -0.31
RFTN1-201ENST00000334133 TRAV26-1A0A087WT03 109 aa13.1□□□□□ -0.31
RFTN1-201ENST00000334133 LINC00337Q8N6G1 96 aa13.1□□□□□ -0.31
RFTN1-201ENST00000334133 PKD1L1Q8TDX9 2849 aa13.09□□□□□ -0.31
RFTN1-201ENST00000334133 DAD1P61803 113 aa13.09□□□□□ -0.31
RFTN1-201ENST00000334133 STAB1Q9NY15 2570 aa13.08□□□□□ -0.31
RFTN1-201ENST00000334133 FAM218AQ96MZ4 157 aa13.08□□□□□ -0.31
RFTN1-201ENST00000334133 IGKV2-28A0A075B6P5 120 aa13.08□□□□□ -0.32
RFTN1-201ENST00000334133 SMIM9A6NGZ8 99 aa13.08□□□□□ -0.32
RFTN1-201ENST00000334133 IGKV2D-28P01615 120 aa13.08□□□□□ -0.32
RFTN1-201ENST00000334133 CCL18P55774 89 aa13.08□□□□□ -0.32
RFTN1-201ENST00000334133 SHISA2Q6UWI4 295 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms