RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 CIRBPQ14011 172 aaKnown RBP10.77□□□□□ -0.68
CSDC2-201ENST00000306149 GAGE7O76087 117 aa10.77□□□□□ -0.69
CSDC2-201ENST00000306149 GAGE12FP0CL80 117 aa10.77□□□□□ -0.69
CSDC2-201ENST00000306149 GAGE12GP0CL81 117 aa10.77□□□□□ -0.69
CSDC2-201ENST00000306149 GAGE12IP0CL82 117 aa10.77□□□□□ -0.69
CSDC2-201ENST00000306149 TMEM86BQ8N661 226 aa10.77□□□□□ -0.69
CSDC2-201ENST00000306149 PDZD2O15018 2839 aa10.77□□□□□ -0.69
CSDC2-201ENST00000306149 GAGE6Q13070 117 aa10.77□□□□□ -0.69
CSDC2-201ENST00000306149 HERV-K104P63124 156 aa10.76□□□□□ -0.69
CSDC2-201ENST00000306149 Q6Q795 121 aa10.76□□□□□ -0.69
CSDC2-201ENST00000306149 LINC00308Q8TCZ7 52 aa10.76□□□□□ -0.69
CSDC2-201ENST00000306149 CSDC2Q9Y534 153 aaKnown RBP10.76□□□□□ -0.69
CSDC2-201ENST00000306149 TRGV2A0A075B6R0 118 aa10.75□□□□□ -0.69
CSDC2-201ENST00000306149 SMIM1B2RUZ4 78 aa10.75□□□□□ -0.69
CSDC2-201ENST00000306149 GAGE2BQ13066 116 aa10.75□□□□□ -0.69
CSDC2-201ENST00000306149 GAGE2EQ4V326 116 aa10.75□□□□□ -0.69
CSDC2-201ENST00000306149 DEFB121Q5J5C9 76 aa10.75□□□□□ -0.69
CSDC2-201ENST00000306149 LINC01006Q8NI28 216 aa10.75□□□□□ -0.69
CSDC2-201ENST00000306149 GAGE2DQ9UEU5 116 aa10.75□□□□□ -0.69
CSDC2-201ENST00000306149 TRAV4A0A0B4J268 109 aa10.75□□□□□ -0.69
CSDC2-201ENST00000306149 IGKV3OR2-268A0A0C4DH90 116 aa10.75□□□□□ -0.69
CSDC2-201ENST00000306149 CRLF1O75462 422 aa10.75□□□□□ -0.69
CSDC2-201ENST00000306149 ANK3Q12955 4377 aaKnown RBP10.74□□□□□ -0.69
CSDC2-201ENST00000306149 COPS9Q8WXC6 57 aa10.74□□□□□ -0.69
CSDC2-201ENST00000306149 CDC42SE2Q9NRR3 84 aa10.74□□□□□ -0.69
CSDC2-201ENST00000306149 HELZ2Q9BYK8 2649 aaKnown RBP10.74□□□□□ -0.69
CSDC2-201ENST00000306149 TRBV10-1A0A0K0K1A3 114 aa10.74□□□□□ -0.69
CSDC2-201ENST00000306149 FAM240AA0A1B0GVK7 77 aa10.74□□□□□ -0.69
CSDC2-201ENST00000306149 DAZ2Q13117 558 aaKnown RBP10.74□□□□□ -0.69
CSDC2-201ENST00000306149 DAZ4Q86SG3 579 aaKnown RBP10.74□□□□□ -0.69
CSDC2-201ENST00000306149 DAZ3Q9NR90 486 aaKnown RBP10.74□□□□□ -0.69
CSDC2-201ENST00000306149 SOSTDC1Q6X4U4 206 aa10.73□□□□□ -0.69
CSDC2-201ENST00000306149 PRIMA1Q86XR5 153 aa10.73□□□□□ -0.69
CSDC2-201ENST00000306149 PLAC8L1A1L4L8 177 aa10.73□□□□□ -0.69
CSDC2-201ENST00000306149 MRPL23Q16540 153 aaKnown RBP10.73□□□□□ -0.69
CSDC2-201ENST00000306149 HIVEP2P31629 2446 aa10.73□□□□□ -0.69
CSDC2-201ENST00000306149 MEIG1Q5JSS6 88 aa10.72□□□□□ -0.69
CSDC2-201ENST00000306149 NOTCH2Q04721 2471 aa10.72□□□□□ -0.69
CSDC2-201ENST00000306149 C15orf53Q8NAA6 179 aa10.72□□□□□ -0.69
CSDC2-201ENST00000306149 UBE2L6O14933 153 aa10.71□□□□□ -0.69
CSDC2-201ENST00000306149 SMIM20Q8N5G0 67 aa10.71□□□□□ -0.69
CSDC2-201ENST00000306149 NHLRC4P0CG21 123 aaPredicted RBP10.71□□□□□ -0.69
CSDC2-201ENST00000306149 NDUFV3P56181 108 aaKnown RBP10.71□□□□□ -0.69
CSDC2-201ENST00000306149 F5H768 121 aa10.71□□□□□ -0.7
CSDC2-201ENST00000306149 PPDPFQ9H3Y8 114 aa10.71□□□□□ -0.7
CSDC2-201ENST00000306149 VWFP04275 2813 aa10.7□□□□□ -0.7
CSDC2-201ENST00000306149 COX7A2LO14548 114 aa10.7□□□□□ -0.7
CSDC2-201ENST00000306149 TMEM243Q9BU79 118 aa10.7□□□□□ -0.7
CSDC2-201ENST00000306149 FASNP49327 2511 aaKnown RBP10.7□□□□□ -0.7
CSDC2-201ENST00000306149 C19orf73Q9NVV2 129 aa10.69□□□□□ -0.7
CSDC2-201ENST00000306149 TRGV4A0A0C4DH28 118 aa10.69□□□□□ -0.7
CSDC2-201ENST00000306149 KRTAP1-1Q07627 177 aa10.69□□□□□ -0.7
CSDC2-201ENST00000306149 UNC79Q9P2D8 2635 aa10.68□□□□□ -0.7
CSDC2-201ENST00000306149 C16orf74Q96GX8 76 aa10.68□□□□□ -0.7
CSDC2-201ENST00000306149 TOMM7Q9P0U1 55 aa10.68□□□□□ -0.7
CSDC2-201ENST00000306149 IGLV1-51P01701 117 aa10.67□□□□□ -0.7
CSDC2-201ENST00000306149 TTC32Q5I0X7 151 aa10.67□□□□□ -0.7
CSDC2-201ENST00000306149 CSNK1G2-AS1Q8NCQ2 148 aa10.67□□□□□ -0.7
CSDC2-201ENST00000306149 IGLV4-60A0A075B6I1 120 aa10.66□□□□□ -0.7
CSDC2-201ENST00000306149 CCDC179H3BU77 68 aa10.66□□□□□ -0.7
CSDC2-201ENST00000306149 FAM110AQ9BQ89 295 aa10.65□□□□□ -0.7
CSDC2-201ENST00000306149 DEFB130BP0DP73 79 aa10.65□□□□□ -0.71
CSDC2-201ENST00000306149 DEFB130AP0DP74 79 aa10.65□□□□□ -0.71
CSDC2-201ENST00000306149 TRACP01848 142 aa10.64□□□□□ -0.71
CSDC2-201ENST00000306149 RNASE1P07998 156 aaKnown RBP10.64□□□□□ -0.71
CSDC2-201ENST00000306149 CHCHD5Q9BSY4 110 aa10.64□□□□□ -0.71
CSDC2-201ENST00000306149 TRBV6-4A0A1B0GX49 114 aa10.63□□□□□ -0.71
CSDC2-201ENST00000306149 FHL2Q14192 279 aa10.63□□□□□ -0.71
CSDC2-201ENST00000306149 ACYP1P07311 99 aa10.63□□□□□ -0.71
CSDC2-201ENST00000306149 TRBV7-7A0A0K0K1E9 115 aa10.62□□□□□ -0.71
CSDC2-201ENST00000306149 SMR3AQ99954 134 aa10.62□□□□□ -0.71
CSDC2-201ENST00000306149 OVOL2Q9BRP0 275 aa10.62□□□□□ -0.71
CSDC2-201ENST00000306149 HECTD1Q9ULT8 2610 aa10.62□□□□□ -0.71
CSDC2-201ENST00000306149 C16orf95Q9H693 158 aa10.61□□□□□ -0.71
CSDC2-201ENST00000306149 TRBV6-8A0A0A6YYG3 113 aa10.61□□□□□ -0.71
CSDC2-201ENST00000306149 CMC4P56277 68 aaPredicted RBP10.61□□□□□ -0.71
CSDC2-201ENST00000306149 FAM222AQ5U5X8 452 aa10.61□□□□□ -0.71
CSDC2-201ENST00000306149 C5orf38Q86SI9 138 aa10.61□□□□□ -0.71
CSDC2-201ENST00000306149 MIR7-3HGQ8N6C7 128 aa10.61□□□□□ -0.71
CSDC2-201ENST00000306149 COX7B2Q8TF08 81 aa10.61□□□□□ -0.71
CSDC2-201ENST00000306149 PF4P02776 101 aa10.6□□□□□ -0.71
CSDC2-201ENST00000306149 FAM218AQ96MZ4 157 aa10.6□□□□□ -0.71
CSDC2-201ENST00000306149 TRAV13-2A0A0B4J235 113 aa10.59□□□□□ -0.71
CSDC2-201ENST00000306149 C11orf68Q9H3H3 251 aaKnown RBP10.59□□□□□ -0.71
CSDC2-201ENST00000306149 A0A096LPF7 62 aa10.59□□□□□ -0.71
CSDC2-201ENST00000306149 LINC00158P58513 81 aa10.58□□□□□ -0.72
CSDC2-201ENST00000306149 RPL28P46779 137 aaKnown RBP10.58□□□□□ -0.72
CSDC2-201ENST00000306149 KRTAP10-3P60369 221 aa10.58□□□□□ -0.72
CSDC2-201ENST00000306149 TENM1Q9UKZ4 2725 aa10.57□□□□□ -0.72
CSDC2-201ENST00000306149 IGHV3OR16-9A0A0B4J2B5 98 aa10.57□□□□□ -0.72
CSDC2-201ENST00000306149 CRPP02741 224 aa10.57□□□□□ -0.72
CSDC2-201ENST00000306149 PFN2P35080 140 aa10.57□□□□□ -0.72
CSDC2-201ENST00000306149 LINC00337Q8N6G1 96 aa10.57□□□□□ -0.72
CSDC2-201ENST00000306149 BAALC-AS2P0C853 105 aa10.57□□□□□ -0.72
CSDC2-201ENST00000306149 C22orf24Q9Y442 160 aa10.57□□□□□ -0.72
CSDC2-201ENST00000306149 CLPSL2Q6UWE3 100 aa10.56□□□□□ -0.72
CSDC2-201ENST00000306149 C3orf56Q8N813 242 aa10.56□□□□□ -0.72
CSDC2-201ENST00000306149 IMUPQ9GZP8 106 aa10.56□□□□□ -0.72
CSDC2-201ENST00000306149 Q9HAA7 133 aa10.56□□□□□ -0.72
CSDC2-201ENST00000306149 SND1-IT1Q9HBX3 110 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms