RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 SS18L2Q9UHA2 77 aa6.45□□□□□ -1.38
SEC16A-201ENST00000277537 PRO1854Q9UHT4 67 aa6.45□□□□□ -1.38
SEC16A-201ENST00000277537 IGHV1-58A0A0C4DH39 117 aa6.44□□□□□ -1.38
SEC16A-201ENST00000277537 BEAN1Q3B7T3 259 aa6.44□□□□□ -1.38
SEC16A-201ENST00000277537 B5MCH6 92 aa6.44□□□□□ -1.38
SEC16A-201ENST00000277537 IGHV4-30-4P0DP06 118 aa6.44□□□□□ -1.38
SEC16A-201ENST00000277537 KRTAP10-3P60369 221 aa6.44□□□□□ -1.38
SEC16A-201ENST00000277537 SPANXB1Q9NS25 103 aaPredicted RBP6.44□□□□□ -1.38
SEC16A-201ENST00000277537 BAHCC1Q9P281 2608 aa6.44□□□□□ -1.38
SEC16A-201ENST00000277537 TRBV6-4A0A1B0GX49 114 aa6.44□□□□□ -1.38
SEC16A-201ENST00000277537 TMEM223A0PJW6 202 aa6.44□□□□□ -1.38
SEC16A-201ENST00000277537 MT-ATP8P03928 68 aa6.44□□□□□ -1.38
SEC16A-201ENST00000277537 COPS9Q8WXC6 57 aa6.44□□□□□ -1.38
SEC16A-201ENST00000277537 CRYBA4P53673 196 aa6.44□□□□□ -1.38
SEC16A-201ENST00000277537 GAGE2BQ13066 116 aa6.44□□□□□ -1.38
SEC16A-201ENST00000277537 GAGE2EQ4V326 116 aa6.44□□□□□ -1.38
SEC16A-201ENST00000277537 CHCHD7Q9BUK0 85 aa6.44□□□□□ -1.38
SEC16A-201ENST00000277537 GAGE2DQ9UEU5 116 aa6.44□□□□□ -1.38
SEC16A-201ENST00000277537 NSD1Q96L73 2696 aaPredicted RBP6.43□□□□□ -1.38
SEC16A-201ENST00000277537 TRBV6-8A0A0A6YYG3 113 aa6.43□□□□□ -1.38
SEC16A-201ENST00000277537 IGHV3-30P01768 117 aa6.43□□□□□ -1.38
SEC16A-201ENST00000277537 IGHV3-33P01772 117 aa6.43□□□□□ -1.38
SEC16A-201ENST00000277537 IGHV3-30-5P0DP03 117 aa6.43□□□□□ -1.38
SEC16A-201ENST00000277537 TSPEAR-AS2P59090 65 aa6.43□□□□□ -1.38
SEC16A-201ENST00000277537 ZFAND6Q6FIF0 208 aa6.43□□□□□ -1.38
SEC16A-201ENST00000277537 PYGO1Q9Y3Y4 419 aa6.43□□□□□ -1.38
SEC16A-201ENST00000277537 UBE2D3P61077 147 aa6.43□□□□□ -1.38
SEC16A-201ENST00000277537 UBE2D2P62837 147 aa6.43□□□□□ -1.38
SEC16A-201ENST00000277537 MRPL23Q16540 153 aaKnown RBP6.43□□□□□ -1.38
SEC16A-201ENST00000277537 UBE2WQ96B02 151 aa6.43□□□□□ -1.38
SEC16A-201ENST00000277537 TINCRA0A1B0GVN0 87 aa6.42□□□□□ -1.38
SEC16A-201ENST00000277537 LINC01546A6NGU7 62 aa6.42□□□□□ -1.38
SEC16A-201ENST00000277537 PIK3CD-AS1Q5SR53 167 aa6.42□□□□□ -1.38
SEC16A-201ENST00000277537 NFE4Q86UQ8 179 aa6.42□□□□□ -1.38
SEC16A-201ENST00000277537 RETNQ9HD89 108 aa6.42□□□□□ -1.38
SEC16A-201ENST00000277537 A0A0J9YXY3 114 aa6.42□□□□□ -1.38
SEC16A-201ENST00000277537 FOXI1Q12951 378 aa6.42□□□□□ -1.38
SEC16A-201ENST00000277537 NTN5Q8WTR8 489 aaPredicted RBP6.42□□□□□ -1.38
SEC16A-201ENST00000277537 VPS13CQ709C8 3753 aa6.42□□□□□ -1.38
SEC16A-201ENST00000277537 SMIM9A6NGZ8 99 aa6.42□□□□□ -1.38
SEC16A-201ENST00000277537 NBPF19A0A087WUL8 3843 aa6.41□□□□□ -1.38
SEC16A-201ENST00000277537 TM2D2Q9BX73 214 aa6.41□□□□□ -1.38
SEC16A-201ENST00000277537 KLK12Q9UKR0 248 aa6.41□□□□□ -1.38
SEC16A-201ENST00000277537 LINC00269Q8N2A0 174 aa6.41□□□□□ -1.38
SEC16A-201ENST00000277537 SPATA3Q8NHX4 192 aa6.41□□□□□ -1.38
SEC16A-201ENST00000277537 ICOSQ9Y6W8 199 aa6.41□□□□□ -1.38
SEC16A-201ENST00000277537 CFC1BP0CG36 223 aa6.4□□□□□ -1.38
SEC16A-201ENST00000277537 CFC1P0CG37 223 aa6.4□□□□□ -1.38
SEC16A-201ENST00000277537 FHL2Q14192 279 aa6.4□□□□□ -1.38
SEC16A-201ENST00000277537 LYRM9A8MSI8 78 aa6.4□□□□□ -1.39
SEC16A-201ENST00000277537 SLC25A20O43772 301 aa6.4□□□□□ -1.39
SEC16A-201ENST00000277537 PPDPFLQ8WWR9 84 aa6.4□□□□□ -1.39
SEC16A-201ENST00000277537 COX6A2Q02221 97 aa6.4□□□□□ -1.39
SEC16A-201ENST00000277537 RNF183Q96D59 192 aa6.4□□□□□ -1.39
SEC16A-201ENST00000277537 TSPAN13O95857 204 aa6.39□□□□□ -1.39
SEC16A-201ENST00000277537 DNAL4O96015 105 aa6.39□□□□□ -1.39
SEC16A-201ENST00000277537 C2orf82Q6UX34 121 aa6.39□□□□□ -1.39
SEC16A-201ENST00000277537 UBE2D1P51668 147 aa6.39□□□□□ -1.39
SEC16A-201ENST00000277537 MRPS36P82909 103 aaKnown RBP6.39□□□□□ -1.39
SEC16A-201ENST00000277537 SHISA2Q6UWI4 295 aa6.39□□□□□ -1.39
SEC16A-201ENST00000277537 C10orf126Q8N4M7 172 aa6.39□□□□□ -1.39
SEC16A-201ENST00000277537 COX7B2Q8TF08 81 aa6.39□□□□□ -1.39
SEC16A-201ENST00000277537 Q9HAA7 133 aa6.39□□□□□ -1.39
SEC16A-201ENST00000277537 IGLV4-60A0A075B6I1 120 aa6.39□□□□□ -1.39
SEC16A-201ENST00000277537 TCL1BO95988 128 aa6.39□□□□□ -1.39
SEC16A-201ENST00000277537 LINC00242Q5T6M2 205 aa6.39□□□□□ -1.39
SEC16A-201ENST00000277537 ANKRD29Q8N6D5 301 aa6.39□□□□□ -1.39
SEC16A-201ENST00000277537 CDC42SE2Q9NRR3 84 aa6.39□□□□□ -1.39
SEC16A-201ENST00000277537 TRAV8-4A0A0B4J246 113 aa6.38□□□□□ -1.39
SEC16A-201ENST00000277537 MIFP14174 115 aa6.38□□□□□ -1.39
SEC16A-201ENST00000277537 NTM-AS1Q6ZSK4 140 aa6.38□□□□□ -1.39
SEC16A-201ENST00000277537 GIG44P09565 113 aaPredicted RBP6.38□□□□□ -1.39
SEC16A-201ENST00000277537 KIR2DL5BQ8NHK3 375 aa6.38□□□□□ -1.39
SEC16A-201ENST00000277537 KRTAP24-1Q3LI83 254 aa6.37□□□□□ -1.39
SEC16A-201ENST00000277537 AMELXQ99217 191 aa6.37□□□□□ -1.39
SEC16A-201ENST00000277537 C19orf73Q9NVV2 129 aa6.37□□□□□ -1.39
SEC16A-201ENST00000277537 A8MTW9 85 aa6.37□□□□□ -1.39
SEC16A-201ENST00000277537 MIR7-3HGQ8N6C7 128 aa6.37□□□□□ -1.39
SEC16A-201ENST00000277537 COX7A2LO14548 114 aa6.36□□□□□ -1.39
SEC16A-201ENST00000277537 XGP55808 180 aa6.36□□□□□ -1.39
SEC16A-201ENST00000277537 OVOL2Q9BRP0 275 aa6.36□□□□□ -1.39
SEC16A-201ENST00000277537 TIRAPP58753 221 aa6.36□□□□□ -1.39
SEC16A-201ENST00000277537 ATXN8Q156A1 80 aa6.36□□□□□ -1.39
SEC16A-201ENST00000277537 TEN1Q86WV5 123 aa6.36□□□□□ -1.39
SEC16A-201ENST00000277537 LINC00526Q96FQ7 95 aa6.36□□□□□ -1.39
SEC16A-201ENST00000277537 ZNF561-AS1K7EIQ3 104 aa6.36□□□□□ -1.39
SEC16A-201ENST00000277537 S100A7L2Q5SY68 101 aa6.36□□□□□ -1.39
SEC16A-201ENST00000277537 IGKV2D-24A0A075B6R9 120 aa6.35□□□□□ -1.39
SEC16A-201ENST00000277537 REG3AQ06141 175 aa6.35□□□□□ -1.39
SEC16A-201ENST00000277537 C11orf45Q8TAV5 145 aa6.35□□□□□ -1.39
SEC16A-201ENST00000277537 CELA1Q9UNI1 258 aa6.35□□□□□ -1.39
SEC16A-201ENST00000277537 SMIM20Q8N5G0 67 aa6.35□□□□□ -1.39
SEC16A-201ENST00000277537 MIAQ16674 131 aa6.35□□□□□ -1.39
SEC16A-201ENST00000277537 C15orf53Q8NAA6 179 aa6.35□□□□□ -1.39
SEC16A-201ENST00000277537 SND1-IT1Q9HBX3 110 aa6.35□□□□□ -1.39
SEC16A-201ENST00000277537 X6R8D5 127 aa6.35□□□□□ -1.39
SEC16A-201ENST00000277537 TEX49A0A1B0GTD5 131 aa6.34□□□□□ -1.39
SEC16A-201ENST00000277537 HERV-K104P63124 156 aa6.34□□□□□ -1.39
SEC16A-201ENST00000277537 CSNK1G2-AS1Q8NCQ2 148 aa6.34□□□□□ -1.39
SEC16A-201ENST00000277537 CHCHD10Q8WYQ3 142 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms