RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 M0R143 59 aa12.82□□□□□ -0.36
TNFSF9-201ENST00000245817 CLPSL2Q6UWE3 100 aa12.82□□□□□ -0.36
TNFSF9-201ENST00000245817 IGHV3-30-3P0DP02 117 aa12.81□□□□□ -0.36
TNFSF9-201ENST00000245817 REG3AQ06141 175 aa12.81□□□□□ -0.36
TNFSF9-201ENST00000245817 C2orf91Q6ZV80 131 aa12.81□□□□□ -0.36
TNFSF9-201ENST00000245817 TRAV8-3A0A0A6YYJ7 113 aa12.8□□□□□ -0.36
TNFSF9-201ENST00000245817 SCGB1D4Q6XE38 83 aa12.8□□□□□ -0.36
TNFSF9-201ENST00000245817 IGHV3-30P01768 117 aa12.8□□□□□ -0.36
TNFSF9-201ENST00000245817 IGHV3-33P01772 117 aa12.8□□□□□ -0.36
TNFSF9-201ENST00000245817 IGHV3-30-5P0DP03 117 aa12.8□□□□□ -0.36
TNFSF9-201ENST00000245817 WFDC10BQ8IUB3 73 aa12.8□□□□□ -0.36
TNFSF9-201ENST00000245817 Q8N3U1 123 aa12.8□□□□□ -0.36
TNFSF9-201ENST00000245817 CCL18P55774 89 aa12.79□□□□□ -0.36
TNFSF9-201ENST00000245817 HIGD1BQ9P298 99 aa12.79□□□□□ -0.36
TNFSF9-201ENST00000245817 KLK12Q9UKR0 248 aa12.79□□□□□ -0.36
TNFSF9-201ENST00000245817 TGP01266 2768 aa12.79□□□□□ -0.36
TNFSF9-201ENST00000245817 XCL1P47992 114 aa12.78□□□□□ -0.36
TNFSF9-201ENST00000245817 TSPEAR-AS2P59090 65 aa12.78□□□□□ -0.36
TNFSF9-201ENST00000245817 BATFQ16520 125 aa12.78□□□□□ -0.36
TNFSF9-201ENST00000245817 CRPP02741 224 aa12.77□□□□□ -0.36
TNFSF9-201ENST00000245817 HINT1P49773 126 aaPredicted RBP12.77□□□□□ -0.37
TNFSF9-201ENST00000245817 IGHV3OR16-9A0A0B4J2B5 98 aa12.76□□□□□ -0.37
TNFSF9-201ENST00000245817 SMIM1B2RUZ4 78 aa12.76□□□□□ -0.37
TNFSF9-201ENST00000245817 SNHG12Q9BXW3 62 aa12.76□□□□□ -0.37
TNFSF9-201ENST00000245817 IGLV5-39A0A0G2JS06 123 aa12.74□□□□□ -0.37
TNFSF9-201ENST00000245817 HSD52Q0P140 79 aa12.74□□□□□ -0.37
TNFSF9-201ENST00000245817 C5orf38Q86SI9 138 aa12.74□□□□□ -0.37
TNFSF9-201ENST00000245817 CHCHD10Q8WYQ3 142 aaPredicted RBP12.74□□□□□ -0.37
TNFSF9-201ENST00000245817 NDUFA12Q9UI09 145 aa12.74□□□□□ -0.37
TNFSF9-201ENST00000245817 IGLV10-54A0A075B6I4 117 aa12.73□□□□□ -0.37
TNFSF9-201ENST00000245817 A0A087WZ39 114 aa12.73□□□□□ -0.37
TNFSF9-201ENST00000245817 LINC01556Q5JQF7 62 aa12.73□□□□□ -0.37
TNFSF9-201ENST00000245817 CD164L2Q6UWJ8 174 aa12.73□□□□□ -0.37
TNFSF9-201ENST00000245817 PRR34Q9NV39 138 aa12.73□□□□□ -0.37
TNFSF9-201ENST00000245817 STAB2Q8WWQ8 2551 aa12.73□□□□□ -0.37
TNFSF9-201ENST00000245817 UBE2WQ96B02 151 aa12.73□□□□□ -0.37
TNFSF9-201ENST00000245817 LINC00588Q9Y4M8 146 aa12.73□□□□□ -0.37
TNFSF9-201ENST00000245817 EREGO14944 169 aa12.72□□□□□ -0.37
TNFSF9-201ENST00000245817 ZFAND6Q6FIF0 208 aa12.72□□□□□ -0.37
TNFSF9-201ENST00000245817 HIST1H4GQ99525 98 aa12.72□□□□□ -0.37
TNFSF9-201ENST00000245817 NUPR2A6NF83 97 aa12.71□□□□□ -0.37
TNFSF9-201ENST00000245817 LBHQ53QV2 105 aaPredicted RBP12.71□□□□□ -0.37
TNFSF9-201ENST00000245817 KLK5Q9Y337 293 aaPredicted RBP12.71□□□□□ -0.37
TNFSF9-201ENST00000245817 TRAV8-4A0A0B4J246 113 aa12.7□□□□□ -0.38
TNFSF9-201ENST00000245817 ENHOQ6UWT2 76 aa12.7□□□□□ -0.38
TNFSF9-201ENST00000245817 COX7A2LO14548 114 aa12.7□□□□□ -0.38
TNFSF9-201ENST00000245817 MALP21145 153 aa12.7□□□□□ -0.38
TNFSF9-201ENST00000245817 SRSF9Q13242 221 aaKnown RBP eCLIP12.7□□□□□ -0.38
TNFSF9-201ENST00000245817 TAL2Q16559 108 aa12.7□□□□□ -0.38
TNFSF9-201ENST00000245817 MIAQ16674 131 aa12.7□□□□□ -0.38
TNFSF9-201ENST00000245817 BVES-AS1Q5T3Y7 98 aa12.7□□□□□ -0.38
TNFSF9-201ENST00000245817 LINC01561Q8N1V8 128 aa12.7□□□□□ -0.38
TNFSF9-201ENST00000245817 TOMM7Q9P0U1 55 aa12.7□□□□□ -0.38
TNFSF9-201ENST00000245817 DNAH10OSP0CZ25 163 aa12.69□□□□□ -0.38
TNFSF9-201ENST00000245817 COX7B2Q8TF08 81 aa12.69□□□□□ -0.38
TNFSF9-201ENST00000245817 NDUFA1O15239 70 aa12.68□□□□□ -0.38
TNFSF9-201ENST00000245817 GAGE12HA6NDE8 117 aa12.67□□□□□ -0.38
TNFSF9-201ENST00000245817 GCSHP23434 173 aa12.67□□□□□ -0.38
TNFSF9-201ENST00000245817 DNAH7Q8WXX0 4024 aa12.67□□□□□ -0.38
TNFSF9-201ENST00000245817 A0A0J9YXY3 114 aa12.67□□□□□ -0.38
TNFSF9-201ENST00000245817 PRSS2P07478 247 aa12.67□□□□□ -0.38
TNFSF9-201ENST00000245817 COL5A1-AS1Q5SY13 56 aa12.67□□□□□ -0.38
TNFSF9-201ENST00000245817 C10orf126Q8N4M7 172 aa12.67□□□□□ -0.38
TNFSF9-201ENST00000245817 ORAOV1Q8WV07 137 aa12.67□□□□□ -0.38
TNFSF9-201ENST00000245817 Q9H8V8 135 aa12.67□□□□□ -0.38
TNFSF9-201ENST00000245817 TMEM238C9JI98 176 aa12.66□□□□□ -0.38
TNFSF9-201ENST00000245817 PTTG1IPP53801 180 aa12.66□□□□□ -0.38
TNFSF9-201ENST00000245817 CEND1Q8N111 149 aa12.66□□□□□ -0.38
TNFSF9-201ENST00000245817 UPK3BQ9BT76 320 aa12.66□□□□□ -0.38
TNFSF9-201ENST00000245817 APLNQ9ULZ1 77 aa12.66□□□□□ -0.38
TNFSF9-201ENST00000245817 HERV-K104P63124 156 aa12.65□□□□□ -0.38
TNFSF9-201ENST00000245817 FOXI1Q12951 378 aa12.65□□□□□ -0.38
TNFSF9-201ENST00000245817 CIRBPQ14011 172 aaKnown RBP12.65□□□□□ -0.38
TNFSF9-201ENST00000245817 C6orf226Q5I0X4 101 aa12.65□□□□□ -0.38
TNFSF9-201ENST00000245817 UBE2DNLQ8IWF7 75 aa12.65□□□□□ -0.38
TNFSF9-201ENST00000245817 SPANXB1Q9NS25 103 aaPredicted RBP12.65□□□□□ -0.38
TNFSF9-201ENST00000245817 APOMO95445 188 aa12.64□□□□□ -0.39
TNFSF9-201ENST00000245817 WWC2-AS2Q96NR7 200 aa12.64□□□□□ -0.39
TNFSF9-201ENST00000245817 A6NDN8 102 aa12.63□□□□□ -0.39
TNFSF9-201ENST00000245817 SFTA2Q6UW10 78 aa12.63□□□□□ -0.39
TNFSF9-201ENST00000245817 C1orf43Q9BWL3 253 aa12.63□□□□□ -0.39
TNFSF9-201ENST00000245817 Q8IZM0 81 aa12.62□□□□□ -0.39
TNFSF9-201ENST00000245817 TM2D2Q9BX73 214 aa12.62□□□□□ -0.39
TNFSF9-201ENST00000245817 MEIG1Q5JSS6 88 aa12.61□□□□□ -0.39
TNFSF9-201ENST00000245817 CFAP161Q6P656 301 aa12.61□□□□□ -0.39
TNFSF9-201ENST00000245817 ZNF625Q96I27 306 aaPredicted RBP12.61□□□□□ -0.39
TNFSF9-201ENST00000245817 TIMM17BO60830 172 aa12.6□□□□□ -0.39
TNFSF9-201ENST00000245817 IGKV2D-24A0A075B6R9 120 aa12.59□□□□□ -0.39
TNFSF9-201ENST00000245817 TMEM238LA0A1B0GVL6 79 aa12.59□□□□□ -0.39
TNFSF9-201ENST00000245817 A6NJY4 79 aa12.59□□□□□ -0.39
TNFSF9-201ENST00000245817 FXYD2P54710 66 aa12.59□□□□□ -0.39
TNFSF9-201ENST00000245817 CKS1BP61024 79 aa12.59□□□□□ -0.39
TNFSF9-201ENST00000245817 IBA57-AS1B1ANH7 110 aa12.58□□□□□ -0.4
TNFSF9-201ENST00000245817 Q6ZVH6 145 aa12.58□□□□□ -0.4
TNFSF9-201ENST00000245817 Q9HAA7 133 aa12.58□□□□□ -0.4
TNFSF9-201ENST00000245817 K7EP13 123 aa12.57□□□□□ -0.4
TNFSF9-201ENST00000245817 CXCL5P42830 114 aa12.57□□□□□ -0.4
TNFSF9-201ENST00000245817 RMI2Q96E14 147 aa12.57□□□□□ -0.4
TNFSF9-201ENST00000245817 SPANXDQ9BXN6 97 aa12.57□□□□□ -0.4
TNFSF9-201ENST00000245817 SPANXCQ9NY87 97 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms