RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 NDUFA1O15239 70 aa11.95□□□□□ -0.5
SSPN-201ENST00000242729 LINC00308Q8TCZ7 52 aa11.95□□□□□ -0.5
SSPN-201ENST00000242729 TRRAPQ9Y4A5 3859 aa11.94□□□□□ -0.5
SSPN-201ENST00000242729 CRLF1O75462 422 aa11.94□□□□□ -0.5
SSPN-201ENST00000242729 IL17DQ8TAD2 202 aa11.94□□□□□ -0.5
SSPN-201ENST00000242729 CDC42SE2Q9NRR3 84 aa11.94□□□□□ -0.5
SSPN-201ENST00000242729 PLAC8L1A1L4L8 177 aa11.94□□□□□ -0.5
SSPN-201ENST00000242729 HERVK_113P63121 156 aa11.94□□□□□ -0.5
SSPN-201ENST00000242729 TIRAPP58753 221 aa11.93□□□□□ -0.5
SSPN-201ENST00000242729 TRAV4A0A0B4J268 109 aa11.93□□□□□ -0.5
SSPN-201ENST00000242729 CIRBPQ14011 172 aaKnown RBP11.93□□□□□ -0.5
SSPN-201ENST00000242729 IGLV4-60A0A075B6I1 120 aa11.92□□□□□ -0.5
SSPN-201ENST00000242729 KRTAP1-1Q07627 177 aa11.92□□□□□ -0.5
SSPN-201ENST00000242729 TRAV25A0A0B4J276 109 aa11.91□□□□□ -0.5
SSPN-201ENST00000242729 COX6CP09669 75 aa11.91□□□□□ -0.5
SSPN-201ENST00000242729 CLPSL2Q6UWE3 100 aa11.91□□□□□ -0.5
SSPN-201ENST00000242729 TMEM243Q9BU79 118 aa11.91□□□□□ -0.5
SSPN-201ENST00000242729 IGLV5-45A0A087WSX0 123 aa11.91□□□□□ -0.5
SSPN-201ENST00000242729 DAZ2Q13117 558 aaKnown RBP11.91□□□□□ -0.5
SSPN-201ENST00000242729 DAZ4Q86SG3 579 aaKnown RBP11.91□□□□□ -0.5
SSPN-201ENST00000242729 CHCHD5Q9BSY4 110 aa11.91□□□□□ -0.5
SSPN-201ENST00000242729 DAZ3Q9NR90 486 aaKnown RBP11.91□□□□□ -0.5
SSPN-201ENST00000242729 TRBV10-2A0A0K0K1G8 114 aa11.9□□□□□ -0.5
SSPN-201ENST00000242729 DEFB4AO15263 64 aa11.9□□□□□ -0.5
SSPN-201ENST00000242729 TMEM86BQ8N661 226 aa11.9□□□□□ -0.5
SSPN-201ENST00000242729 CLUHP3Q96NS8 147 aa11.9□□□□□ -0.5
SSPN-201ENST00000242729 IGLV5-39A0A0G2JS06 123 aa11.9□□□□□ -0.51
SSPN-201ENST00000242729 SPATA3Q8NHX4 192 aa11.9□□□□□ -0.51
SSPN-201ENST00000242729 F5H768 121 aa11.89□□□□□ -0.51
SSPN-201ENST00000242729 C5orf38Q86SI9 138 aa11.89□□□□□ -0.51
SSPN-201ENST00000242729 C19orf73Q9NVV2 129 aa11.89□□□□□ -0.51
SSPN-201ENST00000242729 UBE2WQ96B02 151 aa11.89□□□□□ -0.51
SSPN-201ENST00000242729 SCGB1A1P11684 91 aa11.88□□□□□ -0.51
SSPN-201ENST00000242729 TRBV10-1A0A0K0K1A3 114 aa11.88□□□□□ -0.51
SSPN-201ENST00000242729 IGLV1-51P01701 117 aa11.87□□□□□ -0.51
SSPN-201ENST00000242729 C16orf74Q96GX8 76 aa11.87□□□□□ -0.51
SSPN-201ENST00000242729 A0A1B0GV72 72 aa11.86□□□□□ -0.51
SSPN-201ENST00000242729 PFN2P35080 140 aa11.86□□□□□ -0.51
SSPN-201ENST00000242729 TTC32Q5I0X7 151 aa11.86□□□□□ -0.51
SSPN-201ENST00000242729 CSNK1G2-AS1Q8NCQ2 148 aa11.86□□□□□ -0.51
SSPN-201ENST00000242729 TRAV8-4A0A0B4J246 113 aa11.85□□□□□ -0.51
SSPN-201ENST00000242729 TMEM262E9PQX1 116 aa11.85□□□□□ -0.51
SSPN-201ENST00000242729 LST1O00453 97 aa11.85□□□□□ -0.51
SSPN-201ENST00000242729 LINC00482Q8N8I6 264 aa11.85□□□□□ -0.51
SSPN-201ENST00000242729 KRTAP10-3P60369 221 aa11.84□□□□□ -0.51
SSPN-201ENST00000242729 TEP1Q99973 2627 aaKnown RBP11.84□□□□□ -0.51
SSPN-201ENST00000242729 IFITM1P13164 125 aa11.84□□□□□ -0.51
SSPN-201ENST00000242729 FHL2Q14192 279 aa11.84□□□□□ -0.51
SSPN-201ENST00000242729 MIR7-3HGQ8N6C7 128 aa11.84□□□□□ -0.51
SSPN-201ENST00000242729 Q9HAA7 133 aa11.84□□□□□ -0.51
SSPN-201ENST00000242729 TIMM17BO60830 172 aa11.83□□□□□ -0.52
SSPN-201ENST00000242729 LINC00158P58513 81 aa11.83□□□□□ -0.52
SSPN-201ENST00000242729 RNASE1P07998 156 aaKnown RBP11.83□□□□□ -0.52
SSPN-201ENST00000242729 RNF183Q96D59 192 aa11.83□□□□□ -0.52
SSPN-201ENST00000242729 TRAV26-1A0A087WT03 109 aa11.82□□□□□ -0.52
SSPN-201ENST00000242729 PF4P02776 101 aa11.82□□□□□ -0.52
SSPN-201ENST00000242729 FAM218AQ96MZ4 157 aa11.82□□□□□ -0.52
SSPN-201ENST00000242729 XCL1P47992 114 aa11.82□□□□□ -0.52
SSPN-201ENST00000242729 SNCGO76070 127 aa11.81□□□□□ -0.52
SSPN-201ENST00000242729 Q8N3U1 123 aa11.81□□□□□ -0.52
SSPN-201ENST00000242729 CSDC2Q9Y534 153 aaKnown RBP11.81□□□□□ -0.52
SSPN-201ENST00000242729 TRBV6-8A0A0A6YYG3 113 aa11.81□□□□□ -0.52
SSPN-201ENST00000242729 C15orf53Q8NAA6 179 aa11.81□□□□□ -0.52
SSPN-201ENST00000242729 COX7B2Q8TF08 81 aa11.81□□□□□ -0.52
SSPN-201ENST00000242729 TEX29Q8N6K0 151 aa11.8□□□□□ -0.52
SSPN-201ENST00000242729 NSD1Q96L73 2696 aaPredicted RBP11.8□□□□□ -0.52
SSPN-201ENST00000242729 GYPEP15421 78 aa11.8□□□□□ -0.52
SSPN-201ENST00000242729 TRBV6-4A0A1B0GX49 114 aa11.79□□□□□ -0.52
SSPN-201ENST00000242729 ANAPC13Q9BS18 74 aa11.79□□□□□ -0.52
SSPN-201ENST00000242729 LINC00337Q8N6G1 96 aa11.78□□□□□ -0.52
SSPN-201ENST00000242729 PKD1L1Q8TDX9 2849 aa11.78□□□□□ -0.52
SSPN-201ENST00000242729 HIVEP1P15822 2718 aa11.77□□□□□ -0.52
SSPN-201ENST00000242729 IGLV10-54A0A075B6I4 117 aa11.77□□□□□ -0.53
SSPN-201ENST00000242729 GAGE2BQ13066 116 aa11.77□□□□□ -0.53
SSPN-201ENST00000242729 GAGE2EQ4V326 116 aa11.77□□□□□ -0.53
SSPN-201ENST00000242729 SND1-IT1Q9HBX3 110 aa11.77□□□□□ -0.53
SSPN-201ENST00000242729 GAGE2DQ9UEU5 116 aa11.77□□□□□ -0.53
SSPN-201ENST00000242729 COX7A2LO14548 114 aa11.76□□□□□ -0.53
SSPN-201ENST00000242729 ATP5G1P05496 136 aa11.76□□□□□ -0.53
SSPN-201ENST00000242729 OVOL2Q9BRP0 275 aa11.76□□□□□ -0.53
SSPN-201ENST00000242729 CITED1Q99966 193 aa11.75□□□□□ -0.53
SSPN-201ENST00000242729 C16orf95Q9H693 158 aa11.75□□□□□ -0.53
SSPN-201ENST00000242729 IGKV2-28A0A075B6P5 120 aa11.75□□□□□ -0.53
SSPN-201ENST00000242729 H3BT86 120 aa11.75□□□□□ -0.53
SSPN-201ENST00000242729 IGKV2D-28P01615 120 aa11.75□□□□□ -0.53
SSPN-201ENST00000242729 HILS1P60008 231 aa11.75□□□□□ -0.53
SSPN-201ENST00000242729 DEFB135Q30KP9 77 aa11.75□□□□□ -0.53
SSPN-201ENST00000242729 IGHV3OR16-9A0A0B4J2B5 98 aa11.74□□□□□ -0.53
SSPN-201ENST00000242729 OR13C6PQ8NH95 151 aa11.74□□□□□ -0.53
SSPN-201ENST00000242729 SHISA2Q6UWI4 295 aa11.74□□□□□ -0.53
SSPN-201ENST00000242729 M0QXV9 152 aa11.73□□□□□ -0.53
SSPN-201ENST00000242729 PRR3P79522 188 aaKnown RBP11.73□□□□□ -0.53
SSPN-201ENST00000242729 FAM19A3Q7Z5A8 133 aa11.73□□□□□ -0.53
SSPN-201ENST00000242729 PAX4O43316 350 aa11.73□□□□□ -0.53
SSPN-201ENST00000242729 CRPP02741 224 aa11.73□□□□□ -0.53
SSPN-201ENST00000242729 BAALC-AS2P0C853 105 aa11.73□□□□□ -0.53
SSPN-201ENST00000242729 C6orf226Q5I0X4 101 aa11.73□□□□□ -0.53
SSPN-201ENST00000242729 LINC00959A0A1B0GUT2 108 aa11.73□□□□□ -0.53
SSPN-201ENST00000242729 CCL18P55774 89 aa11.73□□□□□ -0.53
SSPN-201ENST00000242729 HERV-K104P63124 156 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms