RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 PDE6GP18545 87 aa6.95□□□□□ -1.3
CCDC113-201ENST00000219299 Q6ZTI0 123 aa6.95□□□□□ -1.3
CCDC113-201ENST00000219299 FAM222AQ5U5X8 452 aa6.95□□□□□ -1.3
CCDC113-201ENST00000219299 WFDC9Q8NEX5 89 aa6.95□□□□□ -1.3
CCDC113-201ENST00000219299 IGLV1-51P01701 117 aa6.95□□□□□ -1.3
CCDC113-201ENST00000219299 P0DMU3 169 aa6.95□□□□□ -1.3
CCDC113-201ENST00000219299 FAM231AP0DMU4 169 aa6.95□□□□□ -1.3
CCDC113-201ENST00000219299 FAM231CP0DMU5 169 aa6.95□□□□□ -1.3
CCDC113-201ENST00000219299 C2orf91Q6ZV80 131 aa6.95□□□□□ -1.3
CCDC113-201ENST00000219299 A0A0J9YXY3 114 aa6.94□□□□□ -1.3
CCDC113-201ENST00000219299 PRM2P04554 102 aa6.94□□□□□ -1.3
CCDC113-201ENST00000219299 Q8N2B8 174 aa6.94□□□□□ -1.3
CCDC113-201ENST00000219299 NEXN-AS1Q8NBZ9 246 aa6.94□□□□□ -1.3
CCDC113-201ENST00000219299 HHLA3Q9XRX5 114 aa6.94□□□□□ -1.3
CCDC113-201ENST00000219299 KRTAP24-1Q3LI83 254 aa6.94□□□□□ -1.3
CCDC113-201ENST00000219299 CLPSL2Q6UWE3 100 aa6.94□□□□□ -1.3
CCDC113-201ENST00000219299 NFE4Q86UQ8 179 aa6.94□□□□□ -1.3
CCDC113-201ENST00000219299 UBR5O95071 2799 aaPredicted RBP6.94□□□□□ -1.3
CCDC113-201ENST00000219299 TRBV7-3A0A075B6L6 115 aa6.93□□□□□ -1.3
CCDC113-201ENST00000219299 Q6ZQT7 251 aa6.93□□□□□ -1.3
CCDC113-201ENST00000219299 IGKV2D-26A0A0A0MRZ7 120 aa6.93□□□□□ -1.3
CCDC113-201ENST00000219299 CRIP1P50238 77 aa6.93□□□□□ -1.3
CCDC113-201ENST00000219299 KRTAP1-3Q8IUG1 177 aa6.93□□□□□ -1.3
CCDC113-201ENST00000219299 IMUPQ9GZP8 106 aa6.93□□□□□ -1.3
CCDC113-201ENST00000219299 TRBV10-1A0A0K0K1A3 114 aa6.93□□□□□ -1.3
CCDC113-201ENST00000219299 FAM236DA0A1B0GTK5 79 aa6.93□□□□□ -1.3
CCDC113-201ENST00000219299 FAM236CP0DP71 79 aa6.93□□□□□ -1.3
CCDC113-201ENST00000219299 C14orf132Q9NPU4 83 aa6.93□□□□□ -1.3
CCDC113-201ENST00000219299 U3KQK5 164 aa6.93□□□□□ -1.3
CCDC113-201ENST00000219299 IGHV4-30-4P0DP06 118 aa6.93□□□□□ -1.3
CCDC113-201ENST00000219299 UBE2BP63146 152 aa6.93□□□□□ -1.3
CCDC113-201ENST00000219299 TRBV30A0A0K0K1B3 111 aa6.92□□□□□ -1.3
CCDC113-201ENST00000219299 CXCL5P42830 114 aa6.92□□□□□ -1.3
CCDC113-201ENST00000219299 ATP5EP2Q5VTU8 51 aa6.92□□□□□ -1.3
CCDC113-201ENST00000219299 MAPKAPK5-AS1Q8N8E1 139 aa6.92□□□□□ -1.3
CCDC113-201ENST00000219299 C11orf45Q8TAV5 145 aa6.92□□□□□ -1.3
CCDC113-201ENST00000219299 MIR7-3HGQ8N6C7 128 aa6.92□□□□□ -1.3
CCDC113-201ENST00000219299 PRO0255Q9UI72 69 aa6.92□□□□□ -1.3
CCDC113-201ENST00000219299 MRPS12O15235 138 aaKnown RBP6.92□□□□□ -1.3
CCDC113-201ENST00000219299 IGLV2-11P01706 119 aa6.92□□□□□ -1.3
CCDC113-201ENST00000219299 CFAP126Q5VTH2 177 aa6.92□□□□□ -1.3
CCDC113-201ENST00000219299 C20orf197Q8N268 126 aa6.92□□□□□ -1.3
CCDC113-201ENST00000219299 LYRM9A8MSI8 78 aa6.92□□□□□ -1.3
CCDC113-201ENST00000219299 DEFB105AQ8NG35 78 aa6.92□□□□□ -1.3
CCDC113-201ENST00000219299 CAMK2N2Q96S95 79 aa6.92□□□□□ -1.3
CCDC113-201ENST00000219299 Q9HAA7 133 aa6.92□□□□□ -1.3
CCDC113-201ENST00000219299 TRAV23DV6A0A075B6W5 121 aa6.91□□□□□ -1.3
CCDC113-201ENST00000219299 PRR9Q5T870 116 aa6.91□□□□□ -1.3
CCDC113-201ENST00000219299 UPK3BQ9BT76 320 aa6.91□□□□□ -1.3
CCDC113-201ENST00000219299 IGHV3-33P01772 117 aa6.91□□□□□ -1.3
CCDC113-201ENST00000219299 NOTCH1P46531 2555 aa6.9□□□□□ -1.3
CCDC113-201ENST00000219299 C14orf177Q52M58 125 aa6.9□□□□□ -1.3
CCDC113-201ENST00000219299 SDIM1Q6ZPB5 146 aa6.9□□□□□ -1.3
CCDC113-201ENST00000219299 CLUHP3Q96NS8 147 aa6.9□□□□□ -1.31
CCDC113-201ENST00000219299 LRBAP50851 2863 aa6.9□□□□□ -1.31
CCDC113-201ENST00000219299 IGHV4-4A0A075B6R2 117 aa6.9□□□□□ -1.31
CCDC113-201ENST00000219299 ETDCA0A1B0GVM5 59 aa6.9□□□□□ -1.31
CCDC113-201ENST00000219299 XGP55808 180 aa6.89□□□□□ -1.31
CCDC113-201ENST00000219299 NDUFA1O15239 70 aa6.89□□□□□ -1.31
CCDC113-201ENST00000219299 TRIAP1O43715 76 aa6.89□□□□□ -1.31
CCDC113-201ENST00000219299 IGHV3-30P01768 117 aa6.89□□□□□ -1.31
CCDC113-201ENST00000219299 IGHV3-30-5P0DP03 117 aa6.89□□□□□ -1.31
CCDC113-201ENST00000219299 TMEM223A0PJW6 202 aa6.89□□□□□ -1.31
CCDC113-201ENST00000219299 KLLNB2CW77 178 aa6.89□□□□□ -1.31
CCDC113-201ENST00000219299 HIGD2BQ4VC39 106 aa6.89□□□□□ -1.31
CCDC113-201ENST00000219299 C11orf21Q9P2W6 132 aa6.89□□□□□ -1.31
CCDC113-201ENST00000219299 NDUFC2-KCTD14E9PQ53 114 aa6.89□□□□□ -1.31
CCDC113-201ENST00000219299 MIFP14174 115 aa6.89□□□□□ -1.31
CCDC113-201ENST00000219299 TIRAPP58753 221 aa6.89□□□□□ -1.31
CCDC113-201ENST00000219299 IGHV4-28A0A0C4DH34 117 aa6.88□□□□□ -1.31
CCDC113-201ENST00000219299 CCDC179H3BU77 68 aa6.88□□□□□ -1.31
CCDC113-201ENST00000219299 UFSP1Q6NVU6 142 aa6.88□□□□□ -1.31
CCDC113-201ENST00000219299 Q6Q795 121 aa6.88□□□□□ -1.31
CCDC113-201ENST00000219299 NDUFS5O43920 106 aa6.88□□□□□ -1.31
CCDC113-201ENST00000219299 ZNF22P17026 224 aaPredicted RBP6.88□□□□□ -1.31
CCDC113-201ENST00000219299 RPL18AQ02543 176 aaKnown RBP6.88□□□□□ -1.31
CCDC113-201ENST00000219299 SERP2Q8N6R1 65 aa6.88□□□□□ -1.31
CCDC113-201ENST00000219299 Q8N976 141 aa6.88□□□□□ -1.31
CCDC113-201ENST00000219299 FAM240AA0A1B0GVK7 77 aa6.88□□□□□ -1.31
CCDC113-201ENST00000219299 KIR2DL5BQ8NHK3 375 aa6.88□□□□□ -1.31
CCDC113-201ENST00000219299 DIRC1Q969H9 104 aa6.88□□□□□ -1.31
CCDC113-201ENST00000219299 DEFB131BA0A096LNP1 70 aa6.87□□□□□ -1.31
CCDC113-201ENST00000219299 LINC00310P59036 64 aa6.87□□□□□ -1.31
CCDC113-201ENST00000219299 NCR3O14931 201 aa6.87□□□□□ -1.31
CCDC113-201ENST00000219299 RNF185Q96GF1 192 aa6.87□□□□□ -1.31
CCDC113-201ENST00000219299 V9GYY9 64 aa6.87□□□□□ -1.31
CCDC113-201ENST00000219299 UTP20O75691 2785 aaKnown RBP6.87□□□□□ -1.31
CCDC113-201ENST00000219299 IGLV10-54A0A075B6I4 117 aa6.87□□□□□ -1.31
CCDC113-201ENST00000219299 COX7CP15954 63 aa6.87□□□□□ -1.31
CCDC113-201ENST00000219299 H7C423 109 aa6.86□□□□□ -1.31
CCDC113-201ENST00000219299 NDUFB1O75438 58 aa6.86□□□□□ -1.31
CCDC113-201ENST00000219299 ATP5EP56381 51 aaPredicted RBP6.86□□□□□ -1.31
CCDC113-201ENST00000219299 MRPL55Q7Z7F7 128 aaKnown RBP6.86□□□□□ -1.31
CCDC113-201ENST00000219299 KRTAP1-1Q07627 177 aa6.86□□□□□ -1.31
CCDC113-201ENST00000219299 RNASE3P12724 160 aaKnown RBP6.85□□□□□ -1.31
CCDC113-201ENST00000219299 LINC00308Q8TCZ7 52 aa6.85□□□□□ -1.31
CCDC113-201ENST00000219299 CEMP1Q6PRD7 247 aaPredicted RBP6.85□□□□□ -1.31
CCDC113-201ENST00000219299 RETNQ9HD89 108 aa6.85□□□□□ -1.31
CCDC113-201ENST00000219299 DCHS1Q96JQ0 3298 aa6.85□□□□□ -1.31
CCDC113-201ENST00000219299 MUC4Q99102 2169 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms