RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Oosp2Q4FZG8 168 aa12.85□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Ss18Q62280 418 aa12.85□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Jpt2Q6PGH2 190 aaKnown RBP12.85□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Klk13Q8CGR6 276 aa12.85□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Lamtor2Q9JHS3 125 aa12.85□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Cacna1iE9Q7P2 2199 aa12.84□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 SeleQ00690 612 aa12.84□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Susd3Q9D176 269 aa12.84□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Cep295Q8BQ48 2412 aa12.84□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Il2raP01590 268 aa12.84□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Folr2Q05685 251 aa12.84□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Olfr1209Q3SXJ3 310 aa12.84□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 SlaQ60898 281 aa12.84□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Cd5lQ9QWK4 352 aa12.84□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Gm45861A0A1B0GRY3 1923 aa12.84□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Ms4a12A0A087WSB9 263 aa12.84□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Znf431E9QAG8 526 aa12.84□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Gm10203F6QJ09 66 aa12.84□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Gpx7Q99LJ6 186 aa12.84□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Zfp420Q7TMN8 578 aa12.84□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Nup214Q80U93 2085 aa12.83□□□□□ -0.35
Pcdha9-201ENSMUST00000115659 Myo16Q5DU14 1919 aa12.83□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Trdv1A0A075B657 112 aa12.83□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 KncnQ307W7 124 aa12.83□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Igkv13-85A0A075B666 115 aa12.83□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Tm4sf19E9Q9H8 206 aa12.83□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Tnfrsf26P83626 204 aa12.83□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 H2-DMb2Q31099 261 aa12.83□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Fam168aQ8BGZ2 244 aa12.83□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Trav19A0A0B4J1K4 119 aa12.83□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Wdr86D3Z757 380 aa12.83□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Pate4Q09098 99 aa12.83□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Timm21Q8CCM6 249 aa12.83□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 LbhQ9CX60 105 aa12.83□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Snrnp200Q6P4T2 2136 aaKnown RBP12.83□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Klrd1O54707 179 aa12.82□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 YrdcQ3U5F4 280 aa12.82□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Olfr433Q7TRV9 314 aa12.82□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Ighv1-20A0A0A6YX66 117 aa12.82□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Dock3Q8CIQ7 2027 aa12.82□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Tmem219Q9D123 240 aa12.82□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Ccpg1osV9GXK1 122 aa12.82□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Abca7Q91V24 2159 aa12.82□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Trbv12-2A0A0B4J1H1 124 aa12.82□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Zfp950A0A0U1RQ46 609 aa12.82□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 EpopQ7TNS8 369 aa12.82□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 BC049762Q8C601 163 aa12.82□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Ighv1-7A0A075B5T7 117 aa12.82□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 H2al1nQ497L1 109 aa12.82□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Anapc13Q8R034 74 aa12.82□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Olfr1337A2ACY8 315 aa12.81□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 RhogP84096 191 aa12.81□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Gm10803Q3TZS6 135 aa12.81□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Lypd1Q8BLC3 141 aa12.81□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Ly6lH3BJG9 140 aa12.81□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Crybb3Q9JJU9 211 aa12.81□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Shank1D3YZU1 2167 aa12.81□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Trav21-dv12A0A075B6C4 109 aa12.81□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Gm933J3QPC1 141 aa12.81□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Otx1P80205 355 aa12.81□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Olfr810Q8VFH9 312 aa12.81□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Hils1Q9QYL0 170 aa12.81□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Atg2bQ80XK6 2075 aa12.81□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Esp24A8R0V6 68 aa12.81□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 P18526 117 aa12.81□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Csrp1P97315 193 aaKnown RBP12.81□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Gm1553Q66VB7 94 aa12.81□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Fam19a2Q7TPG7 131 aa12.81□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Timm23Q9WTQ8 209 aa12.81□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 CrebbpP45481 2441 aa12.8□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Foxf2O54743 446 aa12.8□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Snx22Q8C084 192 aa12.8□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Rnase6Q9D244 153 aa12.8□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Fxyd1Q9Z239 92 aa12.8□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Arid2E9Q7E2 1828 aa12.8□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Gm45785A0A1B0GT05 94 aa12.8□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Foxi3E0CZH3 425 aa12.8□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Foxg1Q60987 481 aa12.8□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Ms4a8Q99N10 290 aa12.8□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Avpi1Q9D7H4 142 aa12.8□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Gm45521A0A1B0GRK0 198 aa12.8□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Znf260Q62513 407 aa12.8□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Gm9944Q8C559 102 aa12.8□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Mrps11Q9DCA2 191 aaKnown RBP12.8□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Cbln3Q9JHG0 197 aa12.8□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Trav16d-dv11A0A075B617 117 aa12.8□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Gm36368A0A1D5RLK8 91 aa12.8□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Pax1P09084 446 aa12.8□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Mrpl36Q99N90 102 aa12.8□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Foxh1O88621 401 aa12.79□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Mrpl16Q99N93 251 aa12.79□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Iba57Q8CAK1 358 aaKnown RBP12.79□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Atp23Q9CWQ3 201 aa12.79□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Gnb1lQ9EQ15 326 aa12.79□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Thsd7bQ6P4U0 1607 aa12.79□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Ighv5-12-4A0A0A6YWG4 117 aa12.79□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Igkv4-51A0N8I8 119 aa12.79□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Gm43517E9PYS1 339 aa12.79□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 BmperQ8CJ69 685 aa12.79□□□□□ -0.36
Pcdha9-201ENSMUST00000115659 Q9D8L0 127 aa12.79□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms