RNA–Protein interactions for RNA: ENSMUST00000108909.8

Scn8a-204, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 11,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-204ENSMUST00000108909 Gm37388A0A0A6YY46 143 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Atp5g2P56383 146 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Gm1553Q66VB7 94 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Smim19Q80ZU4 107 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Trav16nA0A075B634 117 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Hoxb2P0C1T1 354 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 CiartQ3TQ03 375 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Lime1Q9EQR5 269 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Rpl36-ps4A0A140T8U4 117 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 RetnQ99P87 114 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 2200002J24RikQ9D807 110 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 MgamB5THE2 1827 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Iglc2P01844 104 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Efna2P52801 209 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 OstcQ78XF5 149 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Gm13199Q8C8E0 125 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Prelid3aQ8VE85 172 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Atp5lQ9CPQ8 103 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 4930544G11RikQ9CR99 193 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Dcaf10A2AKB9 566 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Spaca3Q9D9X8 221 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Bahcc1Q3UHR0 2643 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Grem1O70326 184 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Olfr523Q8VFE7 317 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Scrt1Q99M85 348 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Mrpl52Q9D0Y8 121 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 St6galnac3Q9WUV2 305 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Igkv4-91A0A075B5L2 119 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Rnase2bO35292 155 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Dynlrb2Q9DAJ5 96 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 HcstQ9QUJ0 79 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 Fxyd1Q9Z239 92 aa6.78□□□□□ -1.32
Scn8a-204ENSMUST00000108909 P01637 128 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Saa3P04918 122 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Ndufb3Q9CQZ6 104 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Igkv4-50A0A0B4J1J0 117 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Gm14548E9Q1Z6 680 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Spint5J3KMK8 105 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Q3U1D9 316 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 C1qtnf9Q4ZJN1 333 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Srd5a2Q99N99 254 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Vgll4Q80V24 287 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Tspan2Q922J6 221 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Gpx7Q99LJ6 186 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 PigyP0C1P0 71 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Olfr1402Q8VET1 320 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 6330409D20RikA2AK85 162 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Bcl6bO88282 474 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Ca2P00920 260 aaKnown RBP6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 MetrnQ8C1Q4 291 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 FasnP19096 2504 aaKnown RBP6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Jpt2Q6PGH2 190 aaKnown RBP6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Gm45521A0A1B0GRK0 198 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Cd8bP10300 213 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Gpr82Q8BZR0 328 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Trbv13-3A0A0B4J1H2 113 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Lbhd2G3UW55 114 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Vsig8Q6P3A4 417 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Olfr491Q8VG06 310 aa6.77□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Gm6525A0A0A6YW33 106 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Zic3Q62521 466 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Prr15Q9D1T5 122 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Mmp17Q9R0S3 578 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 TracA0A075B662 137 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 TcraP01849 138 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Sumo2P61957 95 aaKnown RBP6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Hapln4Q80WM4 400 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Ighv14-2A0A075B5R7 117 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 2210407C18RikQ6YI28 220 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Plxdc1Q91ZV7 500 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Olfr1189A2AV11 306 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Gm20825J3QM67 227 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Ssty2Q149W4 227 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Mrps11Q9DCA2 191 aaKnown RBP6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Hs3st6Q5GFD5 342 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Rnase6Q9D244 153 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Tex48Q9DA81 110 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Pax9P47242 342 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Gm45871A0A1B0GRI9 540 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 BokO35425 213 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 SeboxP70368 190 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Znrf1Q91V17 227 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Lhx2Q9Z0S2 406 aa6.76□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Igkv10-95A0A0G2JFY3 115 aa6.75□□□□□ -1.33
Scn8a-204ENSMUST00000108909 GalnsQ571E4 520 aa6.75□□□□□ -1.33
Scn8a-204ENSMUST00000108909 P2ry6Q9ERK9 328 aa6.75□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Dlx6P70397 175 aa6.75□□□□□ -1.33
Scn8a-204ENSMUST00000108909 VwceQ3U515 929 aa6.75□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Tmem50aQ9CXL1 157 aa6.75□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Trbv19A0A0B4J1H4 117 aa6.75□□□□□ -1.33
Scn8a-204ENSMUST00000108909 PifoQ9D9W1 207 aa6.75□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Ighv1-22A0A075B5U7 117 aa6.75□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Ascl5M0QWB7 188 aa6.75□□□□□ -1.33
Scn8a-204ENSMUST00000108909 P18533 117 aa6.75□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Loxl2P58022 776 aa6.75□□□□□ -1.33
Scn8a-204ENSMUST00000108909 AdmP97297 184 aa6.75□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Oosp2Q4FZG8 168 aa6.75□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Tm2d3Q8BJ83 261 aa6.75□□□□□ -1.33
Scn8a-204ENSMUST00000108909 C1qtnf4Q8R066 326 aa6.75□□□□□ -1.33
Scn8a-204ENSMUST00000108909 Ighv1-42A0A0A6YY38 117 aa6.75□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 95.9 ms