RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Sh3bgrl3Q91VW3 93 aa10.03□□□□□ -0.8
Col8a1-201ENSMUST00000089332 Tmem89Q9DA04 169 aa10.03□□□□□ -0.8
Col8a1-201ENSMUST00000089332 Trav4-4-dv10A0A075B651 110 aa10.02□□□□□ -0.8
Col8a1-201ENSMUST00000089332 Igkv13-85A0A075B666 115 aa10.02□□□□□ -0.8
Col8a1-201ENSMUST00000089332 Cd59aO55186 123 aa10.02□□□□□ -0.8
Col8a1-201ENSMUST00000089332 Trav7-5A0A0G2JFX6 112 aa10.02□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Wfdc11A2A5H7 82 aa10.02□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Plp1P60202 277 aa10.02□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Usmg5Q78IK2 58 aa10.02□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Gm14214V9GX35 225 aa10.02□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Hoxa5P09021 270 aa10.02□□□□□ -0.81
Col8a1-201ENSMUST00000089332 QrfpQ8CE23 124 aa10.02□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Ccpg1osV9GXK1 122 aa10.02□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Igkv14-130A0A0G2JF45 117 aa10.02□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Svs5P30933 122 aa10.02□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Rpl23P62830 140 aaKnown RBP10.01□□□□□ -0.81
Col8a1-201ENSMUST00000089332 EpopQ7TNS8 369 aa10.01□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Zg16Q8K0C5 167 aa10.01□□□□□ -0.81
Col8a1-201ENSMUST00000089332 1700020N15RikL7MTX3 112 aa10.01□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Znf146Q8BQN6 292 aa10.01□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Parm1Q923D3 296 aa10.01□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Fbln5Q9WVH9 448 aa10.01□□□□□ -0.81
Col8a1-201ENSMUST00000089332 6430628N08RikA0A0U1RQ45 177 aa10.01□□□□□ -0.81
Col8a1-201ENSMUST00000089332 D830044I16RikA0A1D5RM53 117 aa10.01□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Foxf2O54743 446 aa10.01□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Wnk2Q3UH66 2149 aa10.01□□□□□ -0.81
Col8a1-201ENSMUST00000089332 OstcQ78XF5 149 aa10.01□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Vmn1r54Q9EPB8 315 aa10.01□□□□□ -0.81
Col8a1-201ENSMUST00000089332 PpyP10601 100 aa10.01□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Pax9P47242 342 aa10.01□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Il19Q8CJ70 176 aa10.01□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Tmem167aQ9CR64 72 aa10.01□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Hyls1Q9CXX0 307 aa10.01□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Atg2aQ6P4T0 1914 aa10□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Ighv1-81A0A075B5Y4 117 aa10□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Gsx1P31315 261 aa10□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Gng5Q80SZ7 68 aa10□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Cdcp2Q8BQH6 427 aa10□□□□□ -0.81
Col8a1-201ENSMUST00000089332 GlmpQ9JHJ3 404 aa10□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Efnb3O35393 340 aa10□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Cacng7P62956 275 aa10□□□□□ -0.81
Col8a1-201ENSMUST00000089332 EtdQ80SW5 59 aa10□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Olfr523Q8VFE7 317 aa10□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Ighv1-67A0A0G2JFN9 117 aa10□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Rnf217D3YYI7 515 aa10□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Ncor2Q9WU42 2472 aaKnown RBP10□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Ank3G5E8K5 1961 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Lgals6O54891 301 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Repin1Q5U4E2 545 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Nkx2-8O70584 235 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Igh-3P01867 404 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Cox6a1P43024 111 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Gm4894Q8CA09 118 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Atxn7l1Q9CZ05 146 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Spcs1Q9D958 161 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Gm5819E9PZ96 154 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Ucp1P12242 307 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 ElnP54320 860 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Dynlt3P56387 116 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Gm10447Q3UQ92 135 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Ube2d2bQ6ZWY6 147 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Rchy1Q9CR50 261 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Ighv1-31A0A0A6YWK5 117 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Trbv1A0A0B4J1G7 116 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 H2al2bA9Z055 111 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Lynx1P0DP60 116 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Atp5iQ06185 71 aaKnown RBP9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Derl1Q99J56 251 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Znf22Q9ERU3 237 aa9.99□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Ighv1-15A0A0A6YXA5 117 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Cpsf4lE9Q2N0 280 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 CfdP03953 259 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Olfr1323Q8VF35 309 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Pcdh15Q99PJ1 1943 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Umad1E0CX23 159 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 GchfrP99025 84 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Ccl12Q62401 104 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Hspe1Q64433 102 aaKnown RBP9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 SonQ9QX47 2444 aaKnown RBP9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 A0A1Y7VLU2 103 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 P01802 115 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Q4KKZ1 196 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Olfr148Q60887 310 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 SprnQ8BWU1 147 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Higd1bQ99JY6 98 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Mrpl36Q99N90 102 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Carhsp1Q9CR86 148 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Gm29666A0A087WQ99 126 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Olfr748E9Q9Z0 307 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Gm5150Q1AN92 299 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Rnf166Q3U9F6 237 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Vdac2Q60930 295 aaKnown RBP9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Nhlrc1Q8BR37 401 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Mrps11Q9DCA2 191 aaKnown RBP9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Erg28Q9ERY9 140 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Nat6Q9R123 314 aa9.98□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Gm12355A2A4X6 163 aa9.97□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Gm6871L7N248 545 aa9.97□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Srsf3P84104 164 aaKnown RBP9.97□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Tmem177Q8BPE4 311 aa9.97□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 58.3 ms