RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 MIAQ16674 131 aa12.98□□□□□ -0.33
SCARB2-223ENST00000640640 NDUFA1O15239 70 aa12.98□□□□□ -0.33
SCARB2-223ENST00000640640 C9orf85Q96MD7 179 aa12.98□□□□□ -0.33
SCARB2-223ENST00000640640 PRM2P04554 102 aa12.98□□□□□ -0.33
SCARB2-223ENST00000640640 EDN2P20800 178 aa12.98□□□□□ -0.33
SCARB2-223ENST00000640640 LINC00482Q8N8I6 264 aa12.97□□□□□ -0.33
SCARB2-223ENST00000640640 URB1-AS1Q96HZ7 61 aa12.97□□□□□ -0.33
SCARB2-223ENST00000640640 RS1O15537 224 aa12.97□□□□□ -0.33
SCARB2-223ENST00000640640 CLEC2BQ92478 149 aa12.96□□□□□ -0.33
SCARB2-223ENST00000640640 LYRM9A8MSI8 78 aa12.96□□□□□ -0.33
SCARB2-223ENST00000640640 TMEM223A0PJW6 202 aa12.96□□□□□ -0.34
SCARB2-223ENST00000640640 HILS1P60008 231 aa12.96□□□□□ -0.34
SCARB2-223ENST00000640640 LY6G6DO95868 133 aa12.95□□□□□ -0.34
SCARB2-223ENST00000640640 WFDC10AQ9H1F0 79 aa12.95□□□□□ -0.34
SCARB2-223ENST00000640640 TRBV6-4A0A1B0GX49 114 aa12.95□□□□□ -0.34
SCARB2-223ENST00000640640 RPL18AQ02543 176 aaKnown RBP12.95□□□□□ -0.34
SCARB2-223ENST00000640640 PTH2Q96A98 100 aa12.94□□□□□ -0.34
SCARB2-223ENST00000640640 PYGO1Q9Y3Y4 419 aa12.94□□□□□ -0.34
SCARB2-223ENST00000640640 MKI67P46013 3256 aaKnown RBP12.94□□□□□ -0.34
SCARB2-223ENST00000640640 TSHBP01222 138 aa12.94□□□□□ -0.34
SCARB2-223ENST00000640640 FOXI1Q12951 378 aa12.94□□□□□ -0.34
SCARB2-223ENST00000640640 LINC00269Q8N2A0 174 aa12.94□□□□□ -0.34
SCARB2-223ENST00000640640 TRBV10-2A0A0K0K1G8 114 aa12.93□□□□□ -0.34
SCARB2-223ENST00000640640 LECT2O14960 151 aa12.93□□□□□ -0.34
SCARB2-223ENST00000640640 C9orf153Q5TBE3 101 aa12.93□□□□□ -0.34
SCARB2-223ENST00000640640 H3BT86 120 aa12.93□□□□□ -0.34
SCARB2-223ENST00000640640 ACYP1P07311 99 aa12.92□□□□□ -0.34
SCARB2-223ENST00000640640 C2orf91Q6ZV80 131 aa12.92□□□□□ -0.34
SCARB2-223ENST00000640640 COX8CQ7Z4L0 72 aa12.92□□□□□ -0.34
SCARB2-223ENST00000640640 A0A0B4J2C4 111 aa12.92□□□□□ -0.34
SCARB2-223ENST00000640640 UBE2BP63146 152 aa12.92□□□□□ -0.34
SCARB2-223ENST00000640640 Q8N976 141 aa12.92□□□□□ -0.34
SCARB2-223ENST00000640640 TRBV6-8A0A0A6YYG3 113 aa12.92□□□□□ -0.34
SCARB2-223ENST00000640640 BRI3O95415 125 aa12.92□□□□□ -0.34
SCARB2-223ENST00000640640 CDK2AP2O75956 126 aa12.92□□□□□ -0.34
SCARB2-223ENST00000640640 TCL1BO95988 128 aa12.91□□□□□ -0.34
SCARB2-223ENST00000640640 LAMA3Q16787 3333 aa12.91□□□□□ -0.34
SCARB2-223ENST00000640640 REG3AQ06141 175 aa12.91□□□□□ -0.34
SCARB2-223ENST00000640640 ETDCA0A1B0GVM5 59 aa12.9□□□□□ -0.34
SCARB2-223ENST00000640640 H7C423 109 aa12.9□□□□□ -0.34
SCARB2-223ENST00000640640 TIRAPP58753 221 aa12.9□□□□□ -0.34
SCARB2-223ENST00000640640 SPANXCQ9NY87 97 aa12.9□□□□□ -0.34
SCARB2-223ENST00000640640 DEFB105AQ8NG35 78 aa12.9□□□□□ -0.34
SCARB2-223ENST00000640640 SPANXB1Q9NS25 103 aaPredicted RBP12.9□□□□□ -0.34
SCARB2-223ENST00000640640 ODF3L2Q3SX64 289 aa12.9□□□□□ -0.34
SCARB2-223ENST00000640640 SPANXDQ9BXN6 97 aa12.9□□□□□ -0.34
SCARB2-223ENST00000640640 NCR3O14931 201 aa12.89□□□□□ -0.35
SCARB2-223ENST00000640640 C11orf45Q8TAV5 145 aa12.88□□□□□ -0.35
SCARB2-223ENST00000640640 ZNF580Q9UK33 172 aa12.87□□□□□ -0.35
SCARB2-223ENST00000640640 MIFP14174 115 aa12.87□□□□□ -0.35
SCARB2-223ENST00000640640 PLA2G2AP14555 144 aa12.87□□□□□ -0.35
SCARB2-223ENST00000640640 CHCHD10Q8WYQ3 142 aaPredicted RBP12.87□□□□□ -0.35
SCARB2-223ENST00000640640 A8MZ25 164 aa12.86□□□□□ -0.35
SCARB2-223ENST00000640640 G3V4G9 280 aa12.86□□□□□ -0.35
SCARB2-223ENST00000640640 AGRNO00468 2067 aa12.86□□□□□ -0.35
SCARB2-223ENST00000640640 PIK3CD-AS1Q5SR53 167 aa12.85□□□□□ -0.35
SCARB2-223ENST00000640640 BBC3Q96PG8 261 aaPredicted RBP12.85□□□□□ -0.35
SCARB2-223ENST00000640640 RBMY1FQ15415 496 aaKnown RBP12.85□□□□□ -0.35
SCARB2-223ENST00000640640 LINC00308Q8TCZ7 52 aa12.85□□□□□ -0.35
SCARB2-223ENST00000640640 FLNBO75369 2602 aaKnown RBP12.85□□□□□ -0.35
SCARB2-223ENST00000640640 UBE2D4Q9Y2X8 147 aa12.84□□□□□ -0.35
SCARB2-223ENST00000640640 IGIPA6NJ69 53 aa12.84□□□□□ -0.35
SCARB2-223ENST00000640640 RBX1P62877 108 aa12.84□□□□□ -0.35
SCARB2-223ENST00000640640 SMR3AQ99954 134 aa12.83□□□□□ -0.36
SCARB2-223ENST00000640640 HIGD2BQ4VC39 106 aa12.83□□□□□ -0.36
SCARB2-223ENST00000640640 LOC100131303A0A0U1RQF7 123 aa12.83□□□□□ -0.36
SCARB2-223ENST00000640640 CITED1Q99966 193 aa12.82□□□□□ -0.36
SCARB2-223ENST00000640640 PCSK5Q92824 1860 aa12.82□□□□□ -0.36
SCARB2-223ENST00000640640 DIRC1Q969H9 104 aa12.82□□□□□ -0.36
SCARB2-223ENST00000640640 FAM110AQ9BQ89 295 aa12.82□□□□□ -0.36
SCARB2-223ENST00000640640 BRCA2P51587 3418 aa12.82□□□□□ -0.36
SCARB2-223ENST00000640640 JMJD7-PLA2G4BH0Y9G9 81 aa12.82□□□□□ -0.36
SCARB2-223ENST00000640640 IBA57-AS1B1ANH7 110 aa12.82□□□□□ -0.36
SCARB2-223ENST00000640640 DEFB131BA0A096LNP1 70 aa12.81□□□□□ -0.36
SCARB2-223ENST00000640640 UFSP1Q6NVU6 142 aa12.81□□□□□ -0.36
SCARB2-223ENST00000640640 IGHV4-28A0A0C4DH34 117 aa12.81□□□□□ -0.36
SCARB2-223ENST00000640640 SHISA2Q6UWI4 295 aa12.81□□□□□ -0.36
SCARB2-223ENST00000640640 A0A096LNJ9 63 aa12.8□□□□□ -0.36
SCARB2-223ENST00000640640 MRPS36P82909 103 aaKnown RBP12.79□□□□□ -0.36
SCARB2-223ENST00000640640 FUSP35637 526 aaKnown RBP eCLIP12.79□□□□□ -0.36
SCARB2-223ENST00000640640 TRANK1O15050 2925 aa12.78□□□□□ -0.36
SCARB2-223ENST00000640640 TRIAP1O43715 76 aa12.78□□□□□ -0.36
SCARB2-223ENST00000640640 IGKV3D-7A0A0C4DH55 119 aa12.78□□□□□ -0.36
SCARB2-223ENST00000640640 hADV29S1A0JD25 119 aa12.78□□□□□ -0.36
SCARB2-223ENST00000640640 KIR2DL5BQ8NHK3 375 aa12.78□□□□□ -0.36
SCARB2-223ENST00000640640 NDUFA7O95182 113 aa12.77□□□□□ -0.36
SCARB2-223ENST00000640640 UBE2D3P61077 147 aa12.77□□□□□ -0.36
SCARB2-223ENST00000640640 UBE2D2P62837 147 aa12.77□□□□□ -0.36
SCARB2-223ENST00000640640 IGLV1-51P01701 117 aa12.77□□□□□ -0.36
SCARB2-223ENST00000640640 TRACP01848 142 aa12.77□□□□□ -0.37
SCARB2-223ENST00000640640 TMEM256-PLSCR3K7ERE1 68 aa12.77□□□□□ -0.37
SCARB2-223ENST00000640640 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.77□□□□□ -0.37
SCARB2-223ENST00000640640 UBE2D1P51668 147 aa12.76□□□□□ -0.37
SCARB2-223ENST00000640640 PKIGQ9Y2B9 76 aa12.76□□□□□ -0.37
SCARB2-223ENST00000640640 PTPRBP23467 1997 aa12.76□□□□□ -0.37
SCARB2-223ENST00000640640 TRBV30A0A0K0K1B3 111 aa12.76□□□□□ -0.37
SCARB2-223ENST00000640640 TIMM17BO60830 172 aa12.75□□□□□ -0.37
SCARB2-223ENST00000640640 H3BQ85 93 aa12.75□□□□□ -0.37
SCARB2-223ENST00000640640 RBM3P98179 157 aaKnown RBP12.75□□□□□ -0.37
SCARB2-223ENST00000640640 C1orf158Q8N1D5 194 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms