RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 Q6ZVH6 145 aa5.93□□□□□ -1.46
PNKP-231ENST00000640501 LINC00612Q8N6U2 182 aa5.93□□□□□ -1.46
PNKP-231ENST00000640501 MAPKAPK5-AS1Q8N8E1 139 aa5.93□□□□□ -1.46
PNKP-231ENST00000640501 OPRPNQ99935 248 aaPredicted RBP5.93□□□□□ -1.46
PNKP-231ENST00000640501 PRO0255Q9UI72 69 aa5.93□□□□□ -1.46
PNKP-231ENST00000640501 NOTCH2Q04721 2471 aa5.93□□□□□ -1.46
PNKP-231ENST00000640501 IGHV1-58A0A0C4DH39 117 aa5.92□□□□□ -1.46
PNKP-231ENST00000640501 GAGE10A6NGK3 116 aa5.92□□□□□ -1.46
PNKP-231ENST00000640501 UBE2D1P51668 147 aa5.92□□□□□ -1.46
PNKP-231ENST00000640501 CIRBPQ14011 172 aaKnown RBP5.92□□□□□ -1.46
PNKP-231ENST00000640501 FHL2Q14192 279 aa5.92□□□□□ -1.46
PNKP-231ENST00000640501 Q6ZUT4 128 aa5.92□□□□□ -1.46
PNKP-231ENST00000640501 SH2D6Q7Z4S9 175 aa5.92□□□□□ -1.46
PNKP-231ENST00000640501 FAM19A3Q7Z5A8 133 aa5.92□□□□□ -1.46
PNKP-231ENST00000640501 TTTY13Q9BZ97 58 aa5.92□□□□□ -1.46
PNKP-231ENST00000640501 NHP2Q9NX24 153 aaKnown RBP5.92□□□□□ -1.46
PNKP-231ENST00000640501 TRBV6-8A0A0A6YYG3 113 aa5.91□□□□□ -1.46
PNKP-231ENST00000640501 SPART-AS1P0CW21 52 aa5.91□□□□□ -1.46
PNKP-231ENST00000640501 DAD1P61803 113 aa5.91□□□□□ -1.46
PNKP-231ENST00000640501 RPL24P83731 157 aaKnown RBP5.91□□□□□ -1.46
PNKP-231ENST00000640501 X6R8D5 127 aa5.91□□□□□ -1.46
PNKP-231ENST00000640501 AKAP9Q99996 3911 aa5.91□□□□□ -1.46
PNKP-231ENST00000640501 IGLV5-45A0A087WSX0 123 aa5.9□□□□□ -1.46
PNKP-231ENST00000640501 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.9□□□□□ -1.46
PNKP-231ENST00000640501 A0A0J9YY99 117 aa5.9□□□□□ -1.46
PNKP-231ENST00000640501 A0A1W2PPM0 123 aa5.9□□□□□ -1.46
PNKP-231ENST00000640501 H3BUT2 72 aa5.9□□□□□ -1.46
PNKP-231ENST00000640501 CCL25O15444 150 aa5.9□□□□□ -1.46
PNKP-231ENST00000640501 ATP5G1P05496 136 aa5.9□□□□□ -1.46
PNKP-231ENST00000640501 IGHV3-30-3P0DP02 117 aa5.9□□□□□ -1.46
PNKP-231ENST00000640501 FXYD2P54710 66 aa5.9□□□□□ -1.46
PNKP-231ENST00000640501 DEFB135Q30KP9 77 aa5.9□□□□□ -1.46
PNKP-231ENST00000640501 SAMD5Q5TGI4 173 aa5.9□□□□□ -1.46
PNKP-231ENST00000640501 CEMP1Q6PRD7 247 aaPredicted RBP5.9□□□□□ -1.46
PNKP-231ENST00000640501 SBSPONQ8IVN8 264 aa5.9□□□□□ -1.46
PNKP-231ENST00000640501 ATP6V0E2Q8NHE4 81 aa5.9□□□□□ -1.46
PNKP-231ENST00000640501 RAB37Q96AX2 223 aa5.9□□□□□ -1.46
PNKP-231ENST00000640501 RNF183Q96D59 192 aa5.9□□□□□ -1.46
PNKP-231ENST00000640501 VSIG2Q96IQ7 327 aa5.9□□□□□ -1.46
PNKP-231ENST00000640501 CHCHD5Q9BSY4 110 aa5.9□□□□□ -1.46
PNKP-231ENST00000640501 CDC42SE2Q9NRR3 84 aa5.9□□□□□ -1.46
PNKP-231ENST00000640501 C2CD3Q4AC94 2353 aa5.9□□□□□ -1.46
PNKP-231ENST00000640501 TRAV26-1A0A087WT03 109 aa5.89□□□□□ -1.47
PNKP-231ENST00000640501 PAX4O43316 350 aa5.89□□□□□ -1.47
PNKP-231ENST00000640501 IGHV4-30-4P0DP06 118 aa5.89□□□□□ -1.47
PNKP-231ENST00000640501 GYPEP15421 78 aa5.89□□□□□ -1.47
PNKP-231ENST00000640501 C12orf74Q32Q52 190 aa5.89□□□□□ -1.47
PNKP-231ENST00000640501 FAM222AQ5U5X8 452 aa5.89□□□□□ -1.47
PNKP-231ENST00000640501 SFTA2Q6UW10 78 aa5.89□□□□□ -1.47
PNKP-231ENST00000640501 NDUFA12Q9UI09 145 aa5.89□□□□□ -1.47
PNKP-231ENST00000640501 ANK3Q12955 4377 aaKnown RBP5.89□□□□□ -1.47
PNKP-231ENST00000640501 HIVEP1P15822 2718 aa5.89□□□□□ -1.47
PNKP-231ENST00000640501 IGHV4-28A0A0C4DH34 117 aa5.88□□□□□ -1.47
PNKP-231ENST00000640501 A0A1B0GWB2 263 aa5.88□□□□□ -1.47
PNKP-231ENST00000640501 A8MZ25 164 aa5.88□□□□□ -1.47
PNKP-231ENST00000640501 K7EP34 96 aa5.88□□□□□ -1.47
PNKP-231ENST00000640501 TIMM17BO60830 172 aa5.88□□□□□ -1.47
PNKP-231ENST00000640501 HERV-K104P63124 156 aa5.88□□□□□ -1.47
PNKP-231ENST00000640501 RNASE13Q5GAN3 156 aaKnown RBP5.88□□□□□ -1.47
PNKP-231ENST00000640501 ZFAND6Q6FIF0 208 aa5.88□□□□□ -1.47
PNKP-231ENST00000640501 NTM-AS1Q6ZSK4 140 aa5.88□□□□□ -1.47
PNKP-231ENST00000640501 Q9UF83 564 aa5.88□□□□□ -1.47
PNKP-231ENST00000640501 SPCS1Q9Y6A9 102 aa5.88□□□□□ -1.47
PNKP-231ENST00000640501 TEP1Q99973 2627 aaKnown RBP5.88□□□□□ -1.47
PNKP-231ENST00000640501 FN1P02751 2386 aaKnown RBP5.87□□□□□ -1.47
PNKP-231ENST00000640501 IGHV3-64A0A075B6Q5 118 aa5.87□□□□□ -1.47
PNKP-231ENST00000640501 SPINK8P0C7L1 97 aa5.87□□□□□ -1.47
PNKP-231ENST00000640501 LINC00694P0DN24 101 aa5.87□□□□□ -1.47
PNKP-231ENST00000640501 IFITM1P13164 125 aa5.87□□□□□ -1.47
PNKP-231ENST00000640501 TRAV13-1A0A0B4J241 112 aa5.86□□□□□ -1.47
PNKP-231ENST00000640501 A0A0J9YXY3 114 aa5.86□□□□□ -1.47
PNKP-231ENST00000640501 A0A1B0GUV1 79 aa5.86□□□□□ -1.47
PNKP-231ENST00000640501 NDUFA1O15239 70 aa5.86□□□□□ -1.47
PNKP-231ENST00000640501 IGHV3-30P01768 117 aa5.86□□□□□ -1.47
PNKP-231ENST00000640501 IGHV3-30-5P0DP03 117 aa5.86□□□□□ -1.47
PNKP-231ENST00000640501 TSPEAR-AS2P59090 65 aa5.86□□□□□ -1.47
PNKP-231ENST00000640501 GAGE6Q13070 117 aa5.86□□□□□ -1.47
PNKP-231ENST00000640501 SS18Q15532 418 aa5.86□□□□□ -1.47
PNKP-231ENST00000640501 MRPL23Q16540 153 aaKnown RBP5.86□□□□□ -1.47
PNKP-231ENST00000640501 KRTAP24-1Q3LI83 254 aa5.86□□□□□ -1.47
PNKP-231ENST00000640501 LINC00242Q5T6M2 205 aa5.86□□□□□ -1.47
PNKP-231ENST00000640501 FAM104AQ969W3 186 aa5.86□□□□□ -1.47
PNKP-231ENST00000640501 SPANXDQ9BXN6 97 aa5.86□□□□□ -1.47
PNKP-231ENST00000640501 SPANXCQ9NY87 97 aa5.86□□□□□ -1.47
PNKP-231ENST00000640501 CDKN2A-AS1Q9UH64 79 aa5.86□□□□□ -1.47
PNKP-231ENST00000640501 JMJD1CQ15652 2540 aa5.85□□□□□ -1.47
PNKP-231ENST00000640501 IGLV5-39A0A0G2JS06 123 aa5.85□□□□□ -1.47
PNKP-231ENST00000640501 LOC100131303A0A0U1RQF7 123 aa5.85□□□□□ -1.47
PNKP-231ENST00000640501 IGLL5B9A064 214 aa5.85□□□□□ -1.47
PNKP-231ENST00000640501 TMEM262E9PQX1 116 aa5.85□□□□□ -1.47
PNKP-231ENST00000640501 EGFEM1PQ0D2K5 195 aa5.85□□□□□ -1.47
PNKP-231ENST00000640501 Q8NAQ8 132 aa5.85□□□□□ -1.47
PNKP-231ENST00000640501 PRO1854Q9UHT4 67 aa5.85□□□□□ -1.47
PNKP-231ENST00000640501 ICOSQ9Y6W8 199 aa5.85□□□□□ -1.47
PNKP-231ENST00000640501 TRBV20-1A0A075B6N2 111 aa5.84□□□□□ -1.47
PNKP-231ENST00000640501 TRAV8-3A0A0A6YYJ7 113 aa5.84□□□□□ -1.47
PNKP-231ENST00000640501 A0A0B4J2C4 111 aa5.84□□□□□ -1.47
PNKP-231ENST00000640501 F5H768 121 aa5.84□□□□□ -1.47
PNKP-231ENST00000640501 K7ERJ3 54 aa5.84□□□□□ -1.47
PNKP-231ENST00000640501 APOMO95445 188 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms