RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 CFAP126Q5VTH2 177 aa12.33□□□□□ -0.44
SCARB2-210ENST00000638567 FASNP49327 2511 aaKnown RBP12.33□□□□□ -0.44
SCARB2-210ENST00000638567 Q6YL49 198 aa12.33□□□□□ -0.44
SCARB2-210ENST00000638567 EDN2P20800 178 aa12.32□□□□□ -0.44
SCARB2-210ENST00000638567 AGRNO00468 2067 aa12.32□□□□□ -0.44
SCARB2-210ENST00000638567 PRORYQ9H606 182 aa12.31□□□□□ -0.44
SCARB2-210ENST00000638567 IGIPA6NJ69 53 aa12.31□□□□□ -0.44
SCARB2-210ENST00000638567 J3QKU1 62 aa12.31□□□□□ -0.44
SCARB2-210ENST00000638567 IGLV1-40P01703 118 aa12.31□□□□□ -0.44
SCARB2-210ENST00000638567 PSMG3-AS1Q96PY0 264 aa12.31□□□□□ -0.44
SCARB2-210ENST00000638567 TRANK1O15050 2925 aa12.31□□□□□ -0.44
SCARB2-210ENST00000638567 C9orf85Q96MD7 179 aa12.31□□□□□ -0.44
SCARB2-210ENST00000638567 ZNF462Q96JM2 2506 aa12.31□□□□□ -0.44
SCARB2-210ENST00000638567 F8WEM9 126 aa12.31□□□□□ -0.44
SCARB2-210ENST00000638567 DNAJC9-AS1A6NH13 148 aa12.3□□□□□ -0.44
SCARB2-210ENST00000638567 ATP5G1P05496 136 aa12.3□□□□□ -0.44
SCARB2-210ENST00000638567 LINC00308Q8TCZ7 52 aa12.3□□□□□ -0.44
SCARB2-210ENST00000638567 PYGO1Q9Y3Y4 419 aa12.3□□□□□ -0.44
SCARB2-210ENST00000638567 DOPEY1Q5JWR5 2465 aa12.29□□□□□ -0.44
SCARB2-210ENST00000638567 IGHV4-31P0DP07 118 aa12.29□□□□□ -0.44
SCARB2-210ENST00000638567 MRPL23Q16540 153 aaKnown RBP12.29□□□□□ -0.44
SCARB2-210ENST00000638567 DEFB135Q30KP9 77 aa12.29□□□□□ -0.44
SCARB2-210ENST00000638567 TRBV30A0A0K0K1B3 111 aa12.29□□□□□ -0.44
SCARB2-210ENST00000638567 PIK3CD-AS1Q5SR53 167 aa12.29□□□□□ -0.44
SCARB2-210ENST00000638567 AVPP01185 164 aa12.29□□□□□ -0.44
SCARB2-210ENST00000638567 A0A1B0GX51 115 aa12.28□□□□□ -0.44
SCARB2-210ENST00000638567 PSCAO43653 123 aa12.28□□□□□ -0.44
SCARB2-210ENST00000638567 UBE2DNLQ8IWF7 75 aa12.28□□□□□ -0.44
SCARB2-210ENST00000638567 SPANXCQ9NY87 97 aa12.28□□□□□ -0.44
SCARB2-210ENST00000638567 RAI1Q7Z5J4 1906 aaPredicted RBP12.28□□□□□ -0.44
SCARB2-210ENST00000638567 TRIOO75962 3097 aa12.28□□□□□ -0.44
SCARB2-210ENST00000638567 IGLV2-18A0A075B6J9 118 aa12.27□□□□□ -0.45
SCARB2-210ENST00000638567 C14orf132Q9NPU4 83 aa12.27□□□□□ -0.45
SCARB2-210ENST00000638567 IGKV2D-24A0A075B6R9 120 aa12.27□□□□□ -0.45
SCARB2-210ENST00000638567 SPART-AS1P0CW21 52 aa12.27□□□□□ -0.45
SCARB2-210ENST00000638567 NDUFV3P56181 108 aaKnown RBP12.27□□□□□ -0.45
SCARB2-210ENST00000638567 COL4A2P08572 1712 aa12.26□□□□□ -0.45
SCARB2-210ENST00000638567 C18orf65Q6ZTR6 163 aa12.26□□□□□ -0.45
SCARB2-210ENST00000638567 PRO0255Q9UI72 69 aa12.26□□□□□ -0.45
SCARB2-210ENST00000638567 TIRAPP58753 221 aa12.26□□□□□ -0.45
SCARB2-210ENST00000638567 LINC00643Q86TS7 51 aa12.26□□□□□ -0.45
SCARB2-210ENST00000638567 CAMK2N2Q96S95 79 aa12.26□□□□□ -0.45
SCARB2-210ENST00000638567 NCR3O14931 201 aa12.25□□□□□ -0.45
SCARB2-210ENST00000638567 NDUFA1O15239 70 aa12.25□□□□□ -0.45
SCARB2-210ENST00000638567 RBMY1FQ15415 496 aaKnown RBP12.25□□□□□ -0.45
SCARB2-210ENST00000638567 C9orf66Q5T8R8 295 aa12.25□□□□□ -0.45
SCARB2-210ENST00000638567 ATOX1O00244 68 aa12.25□□□□□ -0.45
SCARB2-210ENST00000638567 SPAG11BQ08648 103 aa12.24□□□□□ -0.45
SCARB2-210ENST00000638567 SPATA25Q9BR10 227 aa12.24□□□□□ -0.45
SCARB2-210ENST00000638567 XGP55808 180 aa12.24□□□□□ -0.45
SCARB2-210ENST00000638567 ZNF702PQ9H963 129 aa12.24□□□□□ -0.45
SCARB2-210ENST00000638567 KLK12Q9UKR0 248 aa12.24□□□□□ -0.45
SCARB2-210ENST00000638567 Q6ZSV7 163 aa12.24□□□□□ -0.45
SCARB2-210ENST00000638567 UBE2D1P51668 147 aa12.23□□□□□ -0.45
SCARB2-210ENST00000638567 IGLV4-69A0A075B6H9 119 aa12.23□□□□□ -0.45
SCARB2-210ENST00000638567 C1orf43Q9BWL3 253 aa12.23□□□□□ -0.45
SCARB2-210ENST00000638567 UBE2D4Q9Y2X8 147 aa12.23□□□□□ -0.45
SCARB2-210ENST00000638567 TSPEAR-AS2P59090 65 aa12.22□□□□□ -0.45
SCARB2-210ENST00000638567 DEFB105AQ8NG35 78 aa12.22□□□□□ -0.45
SCARB2-210ENST00000638567 ACANP16112 2415 aa12.22□□□□□ -0.45
SCARB2-210ENST00000638567 WFDC11Q8NEX6 87 aa12.22□□□□□ -0.45
SCARB2-210ENST00000638567 CFAP54Q96N23 3096 aa12.22□□□□□ -0.45
SCARB2-210ENST00000638567 JMJD7-PLA2G4BH0Y9G9 81 aa12.22□□□□□ -0.45
SCARB2-210ENST00000638567 PTPRBP23467 1997 aa12.21□□□□□ -0.46
SCARB2-210ENST00000638567 XIRP2A4UGR9 3374 aa12.21□□□□□ -0.46
SCARB2-210ENST00000638567 POM121L12Q8N7R1 296 aa12.2□□□□□ -0.46
SCARB2-210ENST00000638567 CXCL5P42830 114 aa12.2□□□□□ -0.46
SCARB2-210ENST00000638567 MRPS36P82909 103 aaKnown RBP12.2□□□□□ -0.46
SCARB2-210ENST00000638567 LINC00269Q8N2A0 174 aa12.19□□□□□ -0.46
SCARB2-210ENST00000638567 CRIP2P52943 208 aaPredicted RBP12.19□□□□□ -0.46
SCARB2-210ENST00000638567 LST1O00453 97 aa12.18□□□□□ -0.46
SCARB2-210ENST00000638567 CITED1Q99966 193 aa12.18□□□□□ -0.46
SCARB2-210ENST00000638567 CDH23Q9H251 3354 aa12.17□□□□□ -0.46
SCARB2-210ENST00000638567 TIMM17BO60830 172 aa12.17□□□□□ -0.46
SCARB2-210ENST00000638567 TRBV6-8A0A0A6YYG3 113 aa12.17□□□□□ -0.46
SCARB2-210ENST00000638567 SLPIP03973 132 aa12.17□□□□□ -0.46
SCARB2-210ENST00000638567 FAM222AQ5U5X8 452 aa12.17□□□□□ -0.46
SCARB2-210ENST00000638567 WFDC10AQ9H1F0 79 aa12.17□□□□□ -0.46
SCARB2-210ENST00000638567 ZNF580Q9UK33 172 aa12.17□□□□□ -0.46
SCARB2-210ENST00000638567 TMEM256-PLSCR3K7ERE1 68 aa12.16□□□□□ -0.46
SCARB2-210ENST00000638567 RBM3P98179 157 aaKnown RBP12.16□□□□□ -0.46
SCARB2-210ENST00000638567 RPL18AQ02543 176 aaKnown RBP12.16□□□□□ -0.46
SCARB2-210ENST00000638567 IBA57-AS1B1ANH7 110 aa12.15□□□□□ -0.46
SCARB2-210ENST00000638567 LOC100131303A0A0U1RQF7 123 aa12.15□□□□□ -0.46
SCARB2-210ENST00000638567 TRBV6-4A0A1B0GX49 114 aa12.15□□□□□ -0.46
SCARB2-210ENST00000638567 SDIM1Q6ZPB5 146 aa12.14□□□□□ -0.47
SCARB2-210ENST00000638567 UBE2D3P61077 147 aa12.14□□□□□ -0.47
SCARB2-210ENST00000638567 UBE2D2P62837 147 aa12.14□□□□□ -0.47
SCARB2-210ENST00000638567 NDUFA7O95182 113 aa12.14□□□□□ -0.47
SCARB2-210ENST00000638567 hADV29S1A0JD25 119 aa12.14□□□□□ -0.47
SCARB2-210ENST00000638567 H7C423 109 aa12.13□□□□□ -0.47
SCARB2-210ENST00000638567 REG3AQ06141 175 aa12.13□□□□□ -0.47
SCARB2-210ENST00000638567 LRRC75A-AS1Q8N1F1 130 aa12.13□□□□□ -0.47
SCARB2-210ENST00000638567 PCSK5Q92824 1860 aa12.13□□□□□ -0.47
SCARB2-210ENST00000638567 CHCHD10Q8WYQ3 142 aaPredicted RBP12.12□□□□□ -0.47
SCARB2-210ENST00000638567 DIRC1Q969H9 104 aa12.12□□□□□ -0.47
SCARB2-210ENST00000638567 LINC00242Q5T6M2 205 aa12.12□□□□□ -0.47
SCARB2-210ENST00000638567 IGHV4-28A0A0C4DH34 117 aa12.11□□□□□ -0.47
SCARB2-210ENST00000638567 ETDCA0A1B0GVM5 59 aa12.1□□□□□ -0.47
SCARB2-210ENST00000638567 ODF3L2Q3SX64 289 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms