RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 NISCHQ9Y2I1 1504 aa29.29■■■□□ 2.28
SCARB2-210ENST00000638567 DCAF8L2P0C7V8 631 aa28.69■■■□□ 2.18
SCARB2-210ENST00000638567 SUPT5HO00267 1087 aaKnown RBP28.09■■■□□ 2.09
SCARB2-210ENST00000638567 SHROOM4Q9ULL8 1493 aa27.79■■■□□ 2.04
SCARB2-210ENST00000638567 EHMT2Q96KQ7 1210 aa26.78■■□□□ 1.88
SCARB2-210ENST00000638567 PCGF6Q9BYE7 350 aa26.61■■□□□ 1.85
SCARB2-210ENST00000638567 FAM9AQ8IZU1 332 aaPredicted RBP26.35■■□□□ 1.81
SCARB2-210ENST00000638567 TRIM41Q8WV44 630 aa25.94■■□□□ 1.74
SCARB2-210ENST00000638567 TTBK1Q5TCY1 1321 aaPredicted RBP25.92■■□□□ 1.74
SCARB2-210ENST00000638567 ZEB1P37275 1124 aaPredicted RBP25.76■■□□□ 1.71
SCARB2-210ENST00000638567 APLP2Q06481 763 aa25.76■■□□□ 1.71
SCARB2-210ENST00000638567 CHIC1Q5VXU3 224 aa25.72■■□□□ 1.71
SCARB2-210ENST00000638567 HRCP23327 699 aa25.72■■□□□ 1.71
SCARB2-210ENST00000638567 CCER1Q8TC90 406 aaPredicted RBP25.61■■□□□ 1.69
SCARB2-210ENST00000638567 LOC105371045A0A1W2PR82 267 aa25.57■■□□□ 1.68
SCARB2-210ENST00000638567 TRIM26Q12899 539 aaPredicted RBP25.51■■□□□ 1.67
SCARB2-210ENST00000638567 PELP1Q8IZL8 1130 aaKnown RBP25.46■■□□□ 1.67
SCARB2-210ENST00000638567 PPARGC1BQ86YN6 1023 aaKnown RBP25.45■■□□□ 1.66
SCARB2-210ENST00000638567 CENPBP07199 599 aaPredicted RBP25.41■■□□□ 1.66
SCARB2-210ENST00000638567 RANGAP1P46060 587 aaPredicted RBP25.41■■□□□ 1.66
SCARB2-210ENST00000638567 UBTFP17480 764 aaKnown RBP25.34■■□□□ 1.65
SCARB2-210ENST00000638567 YTHDC1Q96MU7 727 aaKnown RBP25.05■■□□□ 1.6
SCARB2-210ENST00000638567 ATP1B4Q9UN42 357 aaPredicted RBP24.85■■□□□ 1.57
SCARB2-210ENST00000638567 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.77■■□□□ 1.56
SCARB2-210ENST00000638567 HNRNPUL2Q1KMD3 747 aaKnown RBP24.68■■□□□ 1.54
SCARB2-210ENST00000638567 DIEXFQ68CQ4 756 aaKnown RBP24.53■■□□□ 1.52
SCARB2-210ENST00000638567 ITGAEP38570 1179 aa24.52■■□□□ 1.52
SCARB2-210ENST00000638567 NEFLP07196 543 aa24.47■■□□□ 1.51
SCARB2-210ENST00000638567 ABCC9O60706 1549 aa24.45■■□□□ 1.5
SCARB2-210ENST00000638567 ERICH6Q7L0X2 663 aa24.42■■□□□ 1.5
SCARB2-210ENST00000638567 ZCCHC6Q5VYS8 1495 aaKnown RBP24.42■■□□□ 1.5
SCARB2-210ENST00000638567 MYT1Q01538 1121 aa24.37■■□□□ 1.49
SCARB2-210ENST00000638567 DCAF1Q9Y4B6 1507 aa24.2■■□□□ 1.46
SCARB2-210ENST00000638567 GTF3C3Q9Y5Q9 886 aa24.18■■□□□ 1.46
SCARB2-210ENST00000638567 PABPN1Q86U42 306 aaKnown RBP eCLIP24.17■■□□□ 1.46
SCARB2-210ENST00000638567 MYO15BQ96JP2 1530 aa24.15■■□□□ 1.46
SCARB2-210ENST00000638567 ZNF316A6NFI3 1004 aaPredicted RBP24.01■■□□□ 1.43
SCARB2-210ENST00000638567 CSRNP3Q8WYN3 585 aa23.99■■□□□ 1.43
SCARB2-210ENST00000638567 ACIN1Q9UKV3 1341 aaKnown RBP23.99■■□□□ 1.43
SCARB2-210ENST00000638567 FAM50AQ14320 339 aaKnown RBP23.9■■□□□ 1.42
SCARB2-210ENST00000638567 SCRIBQ14160 1630 aa23.89■■□□□ 1.42
SCARB2-210ENST00000638567 POLR3GLQ9BT43 218 aa23.88■■□□□ 1.41
SCARB2-210ENST00000638567 CNGB1Q14028 1251 aaPredicted RBP23.83■■□□□ 1.41
SCARB2-210ENST00000638567 NEUROD1Q13562 356 aa23.82■■□□□ 1.4
SCARB2-210ENST00000638567 CCDC180Q9P1Z9 1646 aa23.81■■□□□ 1.4
SCARB2-210ENST00000638567 BCANQ96GW7 911 aa23.71■■□□□ 1.39
SCARB2-210ENST00000638567 RSF1Q96T23 1441 aaPredicted RBP23.63■■□□□ 1.37
SCARB2-210ENST00000638567 SCAF1Q9H7N4 1312 aaKnown RBP23.63■■□□□ 1.37
SCARB2-210ENST00000638567 TRIM52Q96A61 297 aa23.56■■□□□ 1.36
SCARB2-210ENST00000638567 ANP32CO43423 234 aa23.53■■□□□ 1.36
SCARB2-210ENST00000638567 P3H3Q8IVL6 736 aa23.51■■□□□ 1.35
SCARB2-210ENST00000638567 MIER1Q8N108 512 aa23.36■■□□□ 1.33
SCARB2-210ENST00000638567 DAXXQ9UER7 740 aaPredicted RBP23.35■■□□□ 1.33
SCARB2-210ENST00000638567 MYT1LQ9UL68 1186 aa23.34■■□□□ 1.33
SCARB2-210ENST00000638567 ZNF326Q5BKZ1 582 aaKnown RBP23.29■■□□□ 1.32
SCARB2-210ENST00000638567 CEP162Q5TB80 1403 aa23.29■■□□□ 1.32
SCARB2-210ENST00000638567 DDX10Q13206 875 aaKnown RBP23.25■■□□□ 1.31
SCARB2-210ENST00000638567 CLIP1P30622 1438 aa23.25■■□□□ 1.31
SCARB2-210ENST00000638567 CDK11AQ9UQ88 783 aaPredicted RBP23.24■■□□□ 1.31
SCARB2-210ENST00000638567 ARID3CA6NKF2 412 aa23.22■■□□□ 1.31
SCARB2-210ENST00000638567 FKBP8Q14318 412 aa23.2■■□□□ 1.3
SCARB2-210ENST00000638567 RTL5Q5HYW3 569 aaPredicted RBP23.18■■□□□ 1.3
SCARB2-210ENST00000638567 CLSPNQ9HAW4 1339 aa23.16■■□□□ 1.3
SCARB2-210ENST00000638567 EEA1Q15075 1411 aa23.12■■□□□ 1.29
SCARB2-210ENST00000638567 CECR2Q9BXF3 1484 aa23.11■■□□□ 1.29
SCARB2-210ENST00000638567 RB1CC1Q8TDY2 1594 aa23.1■■□□□ 1.29
SCARB2-210ENST00000638567 TONSLQ96HA7 1378 aa23.1■■□□□ 1.29
SCARB2-210ENST00000638567 GOLGA3Q08378 1498 aa23.1■■□□□ 1.29
SCARB2-210ENST00000638567 TNIKQ9UKE5 1360 aa23.1■■□□□ 1.29
SCARB2-210ENST00000638567 HNRNPUQ00839 825 aaKnown RBP eCLIP23.03■■□□□ 1.28
SCARB2-210ENST00000638567 SLC4A1APQ9BWU0 796 aaKnown RBP23.03■■□□□ 1.28
SCARB2-210ENST00000638567 WRNQ14191 1432 aaPredicted RBP eCLIP23.03■■□□□ 1.28
SCARB2-210ENST00000638567 FBLN2P98095 1184 aa23.01■■□□□ 1.27
SCARB2-210ENST00000638567 HIRIP3Q9BW71 556 aaPredicted RBP23■■□□□ 1.27
SCARB2-210ENST00000638567 NACADO15069 1562 aa22.95■■□□□ 1.26
SCARB2-210ENST00000638567 ZNF777Q9ULD5 760 aaPredicted RBP22.93■■□□□ 1.26
SCARB2-210ENST00000638567 CHIC2Q9UKJ5 165 aa22.91■■□□□ 1.26
SCARB2-210ENST00000638567 SOGA1O94964 1423 aa22.9■■□□□ 1.26
SCARB2-210ENST00000638567 FAM9BQ8IZU0 186 aa22.9■■□□□ 1.26
SCARB2-210ENST00000638567 CEP164Q9UPV0 1460 aa22.87■■□□□ 1.25
SCARB2-210ENST00000638567 BAZ1AQ9NRL2 1556 aaPredicted RBP22.83■■□□□ 1.25
SCARB2-210ENST00000638567 MROH2BQ7Z745 1585 aa22.82■■□□□ 1.24
SCARB2-210ENST00000638567 MTUS2Q5JR59 1369 aa22.79■■□□□ 1.24
SCARB2-210ENST00000638567 ANP32AP39687 249 aaKnown RBP22.76■■□□□ 1.23
SCARB2-210ENST00000638567 IRX6P78412 446 aaPredicted RBP22.76■■□□□ 1.23
SCARB2-210ENST00000638567 MRS2Q9HD23 443 aa22.72■■□□□ 1.23
SCARB2-210ENST00000638567 CCDC88BA6NC98 1476 aa22.71■■□□□ 1.23
SCARB2-210ENST00000638567 BAZ1BQ9UIG0 1483 aaKnown RBP22.71■■□□□ 1.23
SCARB2-210ENST00000638567 NPM2Q86SE8 214 aaKnown RBP22.71■■□□□ 1.23
SCARB2-210ENST00000638567 ABCC8Q09428 1581 aa22.69■■□□□ 1.22
SCARB2-210ENST00000638567 RRP7BPQ9NSQ0 103 aa22.68■■□□□ 1.22
SCARB2-210ENST00000638567 SIN3AQ96ST3 1273 aa22.68■■□□□ 1.22
SCARB2-210ENST00000638567 KIF27Q86VH2 1401 aa22.67■■□□□ 1.22
SCARB2-210ENST00000638567 SALL2Q9Y467 1007 aaPredicted RBP22.66■■□□□ 1.22
SCARB2-210ENST00000638567 EIF4G2P78344 907 aaKnown RBP eCLIP22.63■■□□□ 1.21
SCARB2-210ENST00000638567 TMC1Q8TDI8 760 aa22.61■■□□□ 1.21
SCARB2-210ENST00000638567 CCDC136Q96JN2 1154 aa22.6■■□□□ 1.21
SCARB2-210ENST00000638567 SUPT16HQ9Y5B9 1047 aaKnown RBP22.59■■□□□ 1.21
SCARB2-210ENST00000638567 VPS8Q8N3P4 1428 aa22.58■■□□□ 1.21
SCARB2-210ENST00000638567 CANXP27824 592 aaKnown RBP22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms