RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 C9orf66Q5T8R8 295 aa10.87□□□□□ -0.67
SCN8A-214ENST00000637709 NFE4Q86UQ8 179 aa10.86□□□□□ -0.67
SCN8A-214ENST00000637709 DNAJC30Q96LL9 226 aa10.86□□□□□ -0.67
SCN8A-214ENST00000637709 IGKV3OR2-268A0A0C4DH90 116 aa10.86□□□□□ -0.67
SCN8A-214ENST00000637709 H3BRM9 83 aa10.86□□□□□ -0.67
SCN8A-214ENST00000637709 SMIM13P0DJ93 91 aa10.86□□□□□ -0.67
SCN8A-214ENST00000637709 TRAV13-1A0A0B4J241 112 aa10.85□□□□□ -0.67
SCN8A-214ENST00000637709 C9orf118A6NHY6 69 aa10.85□□□□□ -0.67
SCN8A-214ENST00000637709 LINC01549A6NIU2 74 aa10.85□□□□□ -0.67
SCN8A-214ENST00000637709 LGALS3P17931 250 aaKnown RBP10.85□□□□□ -0.67
SCN8A-214ENST00000637709 UBE2D3P61077 147 aa10.85□□□□□ -0.67
SCN8A-214ENST00000637709 UBE2D2P62837 147 aa10.85□□□□□ -0.67
SCN8A-214ENST00000637709 COX6A2Q02221 97 aa10.85□□□□□ -0.67
SCN8A-214ENST00000637709 PAPPA-AS1Q5QFB9 102 aa10.85□□□□□ -0.67
SCN8A-214ENST00000637709 X6R8D5 127 aa10.85□□□□□ -0.67
SCN8A-214ENST00000637709 OXLD1Q5BKU9 147 aa10.85□□□□□ -0.67
SCN8A-214ENST00000637709 PYGO1Q9Y3Y4 419 aa10.85□□□□□ -0.67
SCN8A-214ENST00000637709 TENM3Q9P273 2699 aa10.85□□□□□ -0.67
SCN8A-214ENST00000637709 TM2D2Q9BX73 214 aa10.84□□□□□ -0.67
SCN8A-214ENST00000637709 CMYA5Q8N3K9 4069 aa10.84□□□□□ -0.67
SCN8A-214ENST00000637709 A0A0J9YY99 117 aa10.84□□□□□ -0.67
SCN8A-214ENST00000637709 FHL2Q14192 279 aa10.84□□□□□ -0.67
SCN8A-214ENST00000637709 FOSL1P15407 271 aa10.83□□□□□ -0.68
SCN8A-214ENST00000637709 CDKN2A-AS1Q9UH64 79 aa10.83□□□□□ -0.68
SCN8A-214ENST00000637709 IGHV3-30-3P0DP02 117 aa10.83□□□□□ -0.68
SCN8A-214ENST00000637709 MRPS36P82909 103 aaKnown RBP10.83□□□□□ -0.68
SCN8A-214ENST00000637709 OVOL2Q9BRP0 275 aa10.83□□□□□ -0.68
SCN8A-214ENST00000637709 NPC2P61916 151 aa10.82□□□□□ -0.68
SCN8A-214ENST00000637709 C12orf74Q32Q52 190 aa10.82□□□□□ -0.68
SCN8A-214ENST00000637709 TIMM21Q9BVV7 248 aa10.82□□□□□ -0.68
SCN8A-214ENST00000637709 SPANXA1Q9NS26 97 aa10.82□□□□□ -0.68
SCN8A-214ENST00000637709 APOMO95445 188 aa10.82□□□□□ -0.68
SCN8A-214ENST00000637709 GAGE6Q13070 117 aa10.82□□□□□ -0.68
SCN8A-214ENST00000637709 FAM222AQ5U5X8 452 aa10.82□□□□□ -0.68
SCN8A-214ENST00000637709 GAGE10A6NGK3 116 aa10.81□□□□□ -0.68
SCN8A-214ENST00000637709 SAMD5Q5TGI4 173 aa10.81□□□□□ -0.68
SCN8A-214ENST00000637709 C10orf126Q8N4M7 172 aa10.81□□□□□ -0.68
SCN8A-214ENST00000637709 KRTAP24-1Q3LI83 254 aa10.81□□□□□ -0.68
SCN8A-214ENST00000637709 GEMIN7Q9H840 131 aaKnown RBP10.81□□□□□ -0.68
SCN8A-214ENST00000637709 TRBV10-1A0A0K0K1A3 114 aa10.8□□□□□ -0.68
SCN8A-214ENST00000637709 INSL3P51460 131 aa10.8□□□□□ -0.68
SCN8A-214ENST00000637709 UBE2D1P51668 147 aa10.8□□□□□ -0.68
SCN8A-214ENST00000637709 DAZ4Q86SG3 579 aaKnown RBP10.8□□□□□ -0.68
SCN8A-214ENST00000637709 DAZ3Q9NR90 486 aaKnown RBP10.8□□□□□ -0.68
SCN8A-214ENST00000637709 A0A1W2PPM0 123 aa10.8□□□□□ -0.68
SCN8A-214ENST00000637709 LEPROTO15243 131 aa10.8□□□□□ -0.68
SCN8A-214ENST00000637709 MTURNQ8N3F0 131 aa10.8□□□□□ -0.68
SCN8A-214ENST00000637709 UBE2L6O14933 153 aa10.79□□□□□ -0.68
SCN8A-214ENST00000637709 NBEAL1Q6ZS30 2694 aa10.79□□□□□ -0.68
SCN8A-214ENST00000637709 ZNF625Q96I27 306 aaPredicted RBP10.79□□□□□ -0.68
SCN8A-214ENST00000637709 CELA1Q9UNI1 258 aa10.79□□□□□ -0.68
SCN8A-214ENST00000637709 SPCS1Q9Y6A9 102 aa10.79□□□□□ -0.68
SCN8A-214ENST00000637709 A0A0U1RRA0 63 aa10.78□□□□□ -0.68
SCN8A-214ENST00000637709 GYPEP15421 78 aa10.78□□□□□ -0.68
SCN8A-214ENST00000637709 DAND5Q8N907 189 aa10.78□□□□□ -0.68
SCN8A-214ENST00000637709 TRBV6-4A0A1B0GX49 114 aa10.78□□□□□ -0.68
SCN8A-214ENST00000637709 IGHV4-30-4P0DP06 118 aa10.78□□□□□ -0.68
SCN8A-214ENST00000637709 LINC00242Q5T6M2 205 aa10.78□□□□□ -0.68
SCN8A-214ENST00000637709 IGLV4-60A0A075B6I1 120 aa10.77□□□□□ -0.69
SCN8A-214ENST00000637709 IGHV4-28A0A0C4DH34 117 aa10.77□□□□□ -0.69
SCN8A-214ENST00000637709 TINCRA0A1B0GVN0 87 aa10.77□□□□□ -0.69
SCN8A-214ENST00000637709 SBSPONQ8IVN8 264 aa10.77□□□□□ -0.69
SCN8A-214ENST00000637709 IGLL5B9A064 214 aa10.77□□□□□ -0.69
SCN8A-214ENST00000637709 HTN3P15516 51 aa10.77□□□□□ -0.69
SCN8A-214ENST00000637709 OR5A1Q8NGJ0 315 aa10.77□□□□□ -0.69
SCN8A-214ENST00000637709 CHCHD5Q9BSY4 110 aa10.77□□□□□ -0.69
SCN8A-214ENST00000637709 TMEM243Q9BU79 118 aa10.77□□□□□ -0.69
SCN8A-214ENST00000637709 IGHV3-30P01768 117 aa10.76□□□□□ -0.69
SCN8A-214ENST00000637709 IGHV3-30-5P0DP03 117 aa10.76□□□□□ -0.69
SCN8A-214ENST00000637709 TAL2Q16559 108 aa10.76□□□□□ -0.69
SCN8A-214ENST00000637709 ADAMTSL4-AS1Q5T5F5 129 aa10.76□□□□□ -0.69
SCN8A-214ENST00000637709 CLPSL2Q6UWE3 100 aa10.76□□□□□ -0.69
SCN8A-214ENST00000637709 VSIG2Q96IQ7 327 aa10.76□□□□□ -0.69
SCN8A-214ENST00000637709 RETNQ9HD89 108 aa10.76□□□□□ -0.69
SCN8A-214ENST00000637709 CDC42SE2Q9NRR3 84 aa10.76□□□□□ -0.69
SCN8A-214ENST00000637709 PGPEP1Q9NXJ5 209 aa10.76□□□□□ -0.69
SCN8A-214ENST00000637709 IGHV1-58A0A0C4DH39 117 aa10.75□□□□□ -0.69
SCN8A-214ENST00000637709 A0A0J9YXY3 114 aa10.75□□□□□ -0.69
SCN8A-214ENST00000637709 FABP2P12104 132 aa10.75□□□□□ -0.69
SCN8A-214ENST00000637709 NDUFA12Q9UI09 145 aa10.75□□□□□ -0.69
SCN8A-214ENST00000637709 H7C2G1 150 aa10.75□□□□□ -0.69
SCN8A-214ENST00000637709 Q8N3U1 123 aa10.75□□□□□ -0.69
SCN8A-214ENST00000637709 K7EP34 96 aa10.74□□□□□ -0.69
SCN8A-214ENST00000637709 PRSS2P07478 247 aa10.74□□□□□ -0.69
SCN8A-214ENST00000637709 KRTAP10-11P60412 298 aa10.74□□□□□ -0.69
SCN8A-214ENST00000637709 TMEM101Q96IK0 257 aa10.74□□□□□ -0.69
SCN8A-214ENST00000637709 EIF4EBP3O60516 100 aaPredicted RBP10.74□□□□□ -0.69
SCN8A-214ENST00000637709 MUSTN1Q8IVN3 82 aa10.74□□□□□ -0.69
SCN8A-214ENST00000637709 TRBV6-8A0A0A6YYG3 113 aa10.73□□□□□ -0.69
SCN8A-214ENST00000637709 A4D1N5 150 aa10.72□□□□□ -0.69
SCN8A-214ENST00000637709 TMEM262E9PQX1 116 aa10.72□□□□□ -0.69
SCN8A-214ENST00000637709 CRYBA4P53673 196 aa10.72□□□□□ -0.69
SCN8A-214ENST00000637709 KIR2DL5BQ8NHK3 375 aa10.72□□□□□ -0.69
SCN8A-214ENST00000637709 H3BMG7 143 aa10.72□□□□□ -0.69
SCN8A-214ENST00000637709 CFC1BP0CG36 223 aa10.72□□□□□ -0.69
SCN8A-214ENST00000637709 CFC1P0CG37 223 aa10.72□□□□□ -0.69
SCN8A-214ENST00000637709 APOC4P55056 127 aa10.72□□□□□ -0.69
SCN8A-214ENST00000637709 WFDC9Q8NEX5 89 aa10.72□□□□□ -0.69
SCN8A-214ENST00000637709 GTF2H5Q6ZYL4 71 aa10.71□□□□□ -0.69
SCN8A-214ENST00000637709 C3orf56Q8N813 242 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms