RNA–Protein interactions for RNA: ENST00000636818.1

NRXN1-251, Transcript of neurexin 1, human

TSL 5

Gene NRXN1, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-251	ENST00000636818	TRBV27	A0A0K0K1C4	114 aa		-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818		F8VZ95	297 aa		-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818		M0QZ92	97 aa		-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	HBD	P02042	147 aa		-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	CCL2	P13500	99 aa		-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	CRYGS	P22914	178 aa		-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	TPPP2	P59282	170 aa		-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	RPL19	P84098	196 aa	Known RBP	-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	CDC37	Q16543	378 aa	Predicted RBP	-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	RTL8B	Q17RB0	113 aa		-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	HSD17B12	Q53GQ0	312 aa		-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	RPL7L1	Q6DKI1	246 aa	Known RBP	-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	ST13P4	Q8IZP2	240 aa	Predicted RBP	-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	CNPY4	Q8N129	248 aa		-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	BORCS8	Q96FH0	119 aa		-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	DCUN1D5	Q9BTE7	237 aa		-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	RTL8A	Q9BWD3	113 aa		-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	PRO3102	Q9H379	93 aa		-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	C4A	P0C0L4	1744 aa		-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	C4B	P0C0L5	1744 aa		-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	TIAM2	Q8IVF5	1701 aa		-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	RAPGEF6	Q8TEU7	1601 aa		-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	TECPR2	O15040	1411 aa		-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	CLIP1	P30622	1438 aa		-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	RAD50	Q92878	1312 aa		-1.66	□□□□□ -2.68
NRXN1-251	ENST00000636818	CEP250	Q9BV73	2442 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	ATAD2B	Q9ULI0	1458 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	PSME4	Q14997	1843 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	MMP24-AS1	A0A0U1RRL7	71 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	LOC100130705	A0A1B0GUX0	176 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	IGLC7	A0M8Q6	106 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	TMEM238	C9JI98	176 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818		H3BQV1	296 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818		M0QZK8	103 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	NDUFA3	O95167	84 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	COX5B	P10606	129 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	SNCA	P37840	140 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	B2M	P61769	119 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	UBE2G1	P62253	170 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	LSM3	P62310	102 aa	Known RBP	-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	TTC9C	Q8N5M4	171 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	BTF3L4	Q96K17	158 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	PAIP2	Q9BPZ3	127 aa	Known RBP	-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	SLC35B3	Q9H1N7	401 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	PARVG	Q9HBI0	331 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	FGFR1OP2	Q9NVK5	253 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	PLEKHJ1	Q9NW61	149 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	UHRF1BP1	Q6BDS2	1440 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	PRG4	Q92954	1404 aa	Predicted RBP	-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	DCHS1	Q96JQ0	3298 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	WDFY4	Q6ZS81	3184 aa		-1.67	□□□□□ -2.68
NRXN1-251	ENST00000636818	C1orf167	Q5SNV9	1468 aa		-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818	PXDN	Q92626	1479 aa		-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818	NLRP1	Q9C000	1473 aa		-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818	XRN1	Q8IZH2	1706 aa	Known RBP	-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818	TRAV13-1	A0A0B4J241	112 aa		-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818	SPTY2D1-AS1	A0A0U1RR47	76 aa		-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818		A0A1B0GU69	56 aa		-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818		A6NIN4	97 aa		-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818		J3QLW9	94 aa		-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818	IFNA17	P01571	189 aa		-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818	APOE	P02649	317 aa		-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818	SDC2	P34741	201 aa		-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818	NCALD	P61601	193 aa		-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818	RRAS2	P62070	204 aa	Predicted RBP	-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818	LINC01545	Q5VT33	79 aa		-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818	LINC00305	Q7Z4B0	112 aa		-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818	CROCCP2	Q86T23	111 aa		-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818	FAM223A	Q8IWN6	122 aa		-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818	FAM167A-AS1	Q96KT0	104 aa		-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818	PRELID3B	Q9Y3B1	194 aa		-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818	LENEP	Q9Y5L5	61 aa		-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818	LINC01558	Q9Y6Z2	57 aa		-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818	RIMS1	Q86UR5	1692 aa	Known RBP	-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818	DOCK2	Q92608	1830 aa		-1.68	□□□□□ -2.68
NRXN1-251	ENST00000636818	EP400	Q96L91	3159 aa		-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818	BORCS7-ASMT	A0A0B4J1R7	106 aa		-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818	LINC01546	A6NGU7	62 aa		-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818	RIIAD1	A6NNX1	92 aa		-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818	IQCF5	A8MTL0	148 aa		-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818		H3BMG7	143 aa		-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818	GABARAP	H6UMI1	98 aa		-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818	DCTN3	O75935	186 aa		-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818	SFT2D2	O95562	160 aa		-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818	CSTA	P01040	98 aa		-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818	IFNA1	P01562	189 aa		-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818	SLC25A5	P05141	298 aa	Known RBP	-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818	HIST1H1E	P10412	219 aa	Known RBP	-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818	RPL7	P18124	248 aa	Known RBP	-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818	HSD11B1	P28845	292 aa		-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818	LCN6	P62502	163 aa		-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818	PMS2P3	Q13401	168 aa		-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818	S100A7L2	Q5SY68	101 aa		-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818	C10orf128	Q5T292	105 aa		-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818	ATP6V0E2	Q8NHE4	81 aa		-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818	KDM5C	P41229	1560 aa		-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818	PLEKHH2	Q8IVE3	1493 aa		-1.69	□□□□□ -2.68
NRXN1-251	ENST00000636818	PRDM15	P57071	1507 aa	Predicted RBP	-1.7	□□□□□ -2.68
NRXN1-251	ENST00000636818	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	-1.7	□□□□□ -2.68
NRXN1-251	ENST00000636818	NDUFC2	O95298	119 aa		-1.7	□□□□□ -2.68

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms