RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 TIMM21Q9BVV7 248 aa14.06□□□□□ -0.16
PCDHB11-202ENST00000624887 DAZ3Q9NR90 486 aaKnown RBP14.06□□□□□ -0.16
PCDHB11-202ENST00000624887 F8P00451 2351 aa14.06□□□□□ -0.16
PCDHB11-202ENST00000624887 BAHCC1Q9P281 2608 aa14.06□□□□□ -0.16
PCDHB11-202ENST00000624887 TRGV2A0A075B6R0 118 aa14.05□□□□□ -0.16
PCDHB11-202ENST00000624887 RNASE13Q5GAN3 156 aaKnown RBP14.05□□□□□ -0.16
PCDHB11-202ENST00000624887 C9orf66Q5T8R8 295 aa14.05□□□□□ -0.16
PCDHB11-202ENST00000624887 UBE2D3P61077 147 aa14.05□□□□□ -0.16
PCDHB11-202ENST00000624887 UBE2D2P62837 147 aa14.05□□□□□ -0.16
PCDHB11-202ENST00000624887 C12orf74Q32Q52 190 aa14.05□□□□□ -0.16
PCDHB11-202ENST00000624887 Q6ZUT4 128 aa14.05□□□□□ -0.16
PCDHB11-202ENST00000624887 TINCRA0A1B0GVN0 87 aa14.03□□□□□ -0.16
PCDHB11-202ENST00000624887 A0A1B0GWB2 263 aa14.03□□□□□ -0.16
PCDHB11-202ENST00000624887 SPATA3Q8NHX4 192 aa14.03□□□□□ -0.16
PCDHB11-202ENST00000624887 SRSF9Q13242 221 aaKnown RBP eCLIP14.03□□□□□ -0.16
PCDHB11-202ENST00000624887 GAGE12JA6NER3 117 aa14.02□□□□□ -0.16
PCDHB11-202ENST00000624887 GAGE4Q13068 117 aa14.02□□□□□ -0.16
PCDHB11-202ENST00000624887 GAGE5Q13069 117 aa14.02□□□□□ -0.16
PCDHB11-202ENST00000624887 GAGE13Q4V321 117 aa14.02□□□□□ -0.16
PCDHB11-202ENST00000624887 SPANXB1Q9NS25 103 aaPredicted RBP14.02□□□□□ -0.16
PCDHB11-202ENST00000624887 TRBV6-4A0A1B0GX49 114 aa14.02□□□□□ -0.17
PCDHB11-202ENST00000624887 NTM-AS1Q6ZSK4 140 aa14.02□□□□□ -0.17
PCDHB11-202ENST00000624887 CITED1Q99966 193 aa14.02□□□□□ -0.17
PCDHB11-202ENST00000624887 F8W1H4 67 aa14.01□□□□□ -0.17
PCDHB11-202ENST00000624887 IGHV3-64A0A075B6Q5 118 aa14□□□□□ -0.17
PCDHB11-202ENST00000624887 DGAT2L7PQ6IED9 249 aa14□□□□□ -0.17
PCDHB11-202ENST00000624887 TMEM238LA0A1B0GVL6 79 aa14□□□□□ -0.17
PCDHB11-202ENST00000624887 A6NJY4 79 aa14□□□□□ -0.17
PCDHB11-202ENST00000624887 UBE2D1P51668 147 aa14□□□□□ -0.17
PCDHB11-202ENST00000624887 CSDC2Q9Y534 153 aaKnown RBP14□□□□□ -0.17
PCDHB11-202ENST00000624887 VWFP04275 2813 aa13.99□□□□□ -0.17
PCDHB11-202ENST00000624887 TEX48A0A1B0GUV7 120 aa13.99□□□□□ -0.17
PCDHB11-202ENST00000624887 IGLL5B9A064 214 aa13.99□□□□□ -0.17
PCDHB11-202ENST00000624887 GTSF1LQ9H1H1 148 aa13.99□□□□□ -0.17
PCDHB11-202ENST00000624887 TRGV4A0A0C4DH28 118 aa13.98□□□□□ -0.17
PCDHB11-202ENST00000624887 LINC00694P0DN24 101 aa13.98□□□□□ -0.17
PCDHB11-202ENST00000624887 IGHV3-30-3P0DP02 117 aa13.98□□□□□ -0.17
PCDHB11-202ENST00000624887 SBSPONQ8IVN8 264 aa13.98□□□□□ -0.17
PCDHB11-202ENST00000624887 IGHV1-58A0A0C4DH39 117 aa13.97□□□□□ -0.17
PCDHB11-202ENST00000624887 KIR2DL5BQ8NHK3 375 aa13.97□□□□□ -0.17
PCDHB11-202ENST00000624887 IGHV3-30P01768 117 aa13.96□□□□□ -0.17
PCDHB11-202ENST00000624887 IGHV3-30-5P0DP03 117 aa13.96□□□□□ -0.17
PCDHB11-202ENST00000624887 TIRAPP58753 221 aa13.96□□□□□ -0.17
PCDHB11-202ENST00000624887 FHL2Q14192 279 aa13.96□□□□□ -0.17
PCDHB11-202ENST00000624887 GEMIN7Q9H840 131 aaKnown RBP13.96□□□□□ -0.17
PCDHB11-202ENST00000624887 TENM1Q9UKZ4 2725 aa13.96□□□□□ -0.17
PCDHB11-202ENST00000624887 J3QR89 54 aa13.96□□□□□ -0.18
PCDHB11-202ENST00000624887 RPL24P83731 157 aaKnown RBP13.96□□□□□ -0.18
PCDHB11-202ENST00000624887 TRAV8-3A0A0A6YYJ7 113 aa13.95□□□□□ -0.18
PCDHB11-202ENST00000624887 LOC100131303A0A0U1RQF7 123 aa13.95□□□□□ -0.18
PCDHB11-202ENST00000624887 SMAGPQ0VAQ4 97 aa13.95□□□□□ -0.18
PCDHB11-202ENST00000624887 LINC00612Q8N6U2 182 aa13.95□□□□□ -0.18
PCDHB11-202ENST00000624887 X6R8D5 127 aa13.95□□□□□ -0.18
PCDHB11-202ENST00000624887 IGLV5-45A0A087WSX0 123 aa13.94□□□□□ -0.18
PCDHB11-202ENST00000624887 SMIM9A6NGZ8 99 aa13.94□□□□□ -0.18
PCDHB11-202ENST00000624887 C10orf126Q8N4M7 172 aa13.94□□□□□ -0.18
PCDHB11-202ENST00000624887 VSIG2Q96IQ7 327 aa13.94□□□□□ -0.18
PCDHB11-202ENST00000624887 SPATA25Q9BR10 227 aa13.94□□□□□ -0.18
PCDHB11-202ENST00000624887 SIGMAR1Q99720 223 aa13.93□□□□□ -0.18
PCDHB11-202ENST00000624887 TMEM243Q9BU79 118 aa13.93□□□□□ -0.18
PCDHB11-202ENST00000624887 FAM19A3Q7Z5A8 133 aa13.92□□□□□ -0.18
PCDHB11-202ENST00000624887 SPINK8P0C7L1 97 aa13.92□□□□□ -0.18
PCDHB11-202ENST00000624887 CDC42SE2Q9NRR3 84 aa13.92□□□□□ -0.18
PCDHB11-202ENST00000624887 CDKN2A-AS1Q9UH64 79 aa13.92□□□□□ -0.18
PCDHB11-202ENST00000624887 A0A0J9YXY3 114 aa13.91□□□□□ -0.18
PCDHB11-202ENST00000624887 DEFB130BP0DP73 79 aa13.91□□□□□ -0.18
PCDHB11-202ENST00000624887 DEFB130AP0DP74 79 aa13.91□□□□□ -0.18
PCDHB11-202ENST00000624887 H7C423 109 aa13.91□□□□□ -0.18
PCDHB11-202ENST00000624887 HERVK_113P63121 156 aa13.91□□□□□ -0.18
PCDHB11-202ENST00000624887 LINC00242Q5T6M2 205 aa13.91□□□□□ -0.18
PCDHB11-202ENST00000624887 UBE2L6O14933 153 aa13.9□□□□□ -0.18
PCDHB11-202ENST00000624887 KRTAP24-1Q3LI83 254 aa13.9□□□□□ -0.18
PCDHB11-202ENST00000624887 WFDC9Q8NEX5 89 aa13.9□□□□□ -0.18
PCDHB11-202ENST00000624887 PRO0461Q9UI25 63 aa13.9□□□□□ -0.18
PCDHB11-202ENST00000624887 TEP1Q99973 2627 aaKnown RBP13.89□□□□□ -0.19
PCDHB11-202ENST00000624887 COX6A2Q02221 97 aa13.89□□□□□ -0.19
PCDHB11-202ENST00000624887 NDUFA12Q9UI09 145 aa13.89□□□□□ -0.19
PCDHB11-202ENST00000624887 GAGE12HA6NDE8 117 aa13.89□□□□□ -0.19
PCDHB11-202ENST00000624887 WFDC2Q14508 124 aa13.89□□□□□ -0.19
PCDHB11-202ENST00000624887 PGPEP1Q9NXJ5 209 aa13.89□□□□□ -0.19
PCDHB11-202ENST00000624887 ATRQ13535 2644 aa13.88□□□□□ -0.19
PCDHB11-202ENST00000624887 ZFAND6Q6FIF0 208 aa13.88□□□□□ -0.19
PCDHB11-202ENST00000624887 TMEM101Q96IK0 257 aa13.88□□□□□ -0.19
PCDHB11-202ENST00000624887 APOMO95445 188 aa13.87□□□□□ -0.19
PCDHB11-202ENST00000624887 APOC4P55056 127 aa13.87□□□□□ -0.19
PCDHB11-202ENST00000624887 A8MZ25 164 aa13.87□□□□□ -0.19
PCDHB11-202ENST00000624887 CFC1BP0CG36 223 aa13.87□□□□□ -0.19
PCDHB11-202ENST00000624887 CFC1P0CG37 223 aa13.87□□□□□ -0.19
PCDHB11-202ENST00000624887 TRBV6-8A0A0A6YYG3 113 aa13.86□□□□□ -0.19
PCDHB11-202ENST00000624887 TRAV13-1A0A0B4J241 112 aa13.86□□□□□ -0.19
PCDHB11-202ENST00000624887 WIPF1O43516 503 aa13.86□□□□□ -0.19
PCDHB11-202ENST00000624887 LITAFQ99732 161 aa13.86□□□□□ -0.19
PCDHB11-202ENST00000624887 IGLV5-39A0A0G2JS06 123 aa13.85□□□□□ -0.19
PCDHB11-202ENST00000624887 LYRM9A8MSI8 78 aa13.85□□□□□ -0.19
PCDHB11-202ENST00000624887 DEFB135Q30KP9 77 aa13.85□□□□□ -0.19
PCDHB11-202ENST00000624887 MUSTN1Q8IVN3 82 aa13.85□□□□□ -0.19
PCDHB11-202ENST00000624887 ATP6V0E2Q8NHE4 81 aa13.85□□□□□ -0.19
PCDHB11-202ENST00000624887 H3BMG7 143 aa13.84□□□□□ -0.19
PCDHB11-202ENST00000624887 TSPAN13O95857 204 aa13.84□□□□□ -0.19
PCDHB11-202ENST00000624887 A4D1N5 150 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms