RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 PLXNB1O43157 2135 aa5.45□□□□□ -1.54
COLCA1-205ENST00000620864 C11orf45Q8TAV5 145 aa5.45□□□□□ -1.54
COLCA1-205ENST00000620864 MSRB1Q9NZV6 116 aa5.45□□□□□ -1.54
COLCA1-205ENST00000620864 COL4A4P53420 1690 aaPredicted RBP5.45□□□□□ -1.54
COLCA1-205ENST00000620864 IGKV2-24A0A0C4DH68 120 aa5.44□□□□□ -1.54
COLCA1-205ENST00000620864 PSPHP1O15172 72 aa5.44□□□□□ -1.54
COLCA1-205ENST00000620864 LIMD2Q9BT23 127 aa5.44□□□□□ -1.54
COLCA1-205ENST00000620864 PLA2G1BP04054 148 aaKnown RBP5.44□□□□□ -1.54
COLCA1-205ENST00000620864 PATE2Q6UY27 113 aa5.44□□□□□ -1.54
COLCA1-205ENST00000620864 PRYO14603 147 aa5.43□□□□□ -1.54
COLCA1-205ENST00000620864 IGLV2-18A0A075B6J9 118 aa5.43□□□□□ -1.54
COLCA1-205ENST00000620864 IGHV7-81A0A0B4J1V7 117 aa5.43□□□□□ -1.54
COLCA1-205ENST00000620864 ARTNQ5T4W7 220 aa5.43□□□□□ -1.54
COLCA1-205ENST00000620864 TTTY13Q9BZ97 58 aa5.43□□□□□ -1.54
COLCA1-205ENST00000620864 CEP192Q8TEP8 1941 aa5.43□□□□□ -1.54
COLCA1-205ENST00000620864 CACNA1AO00555 2505 aa5.43□□□□□ -1.54
COLCA1-205ENST00000620864 UBE2D3P61077 147 aa5.43□□□□□ -1.54
COLCA1-205ENST00000620864 Q8N976 141 aa5.43□□□□□ -1.54
COLCA1-205ENST00000620864 C19orf84I3L1E1 186 aa5.43□□□□□ -1.54
COLCA1-205ENST00000620864 KRTAP27-1Q3LI81 207 aa5.43□□□□□ -1.54
COLCA1-205ENST00000620864 EBI3Q14213 229 aa5.42□□□□□ -1.54
COLCA1-205ENST00000620864 C4orf3Q8WVX3 66 aa5.42□□□□□ -1.54
COLCA1-205ENST00000620864 ADAMTS20P59510 1910 aa5.42□□□□□ -1.54
COLCA1-205ENST00000620864 COX6B2Q6YFQ2 88 aa5.42□□□□□ -1.54
COLCA1-205ENST00000620864 ACACBO00763 2458 aa5.42□□□□□ -1.54
COLCA1-205ENST00000620864 ZNF22P17026 224 aaPredicted RBP5.42□□□□□ -1.54
COLCA1-205ENST00000620864 XGP55808 180 aa5.42□□□□□ -1.54
COLCA1-205ENST00000620864 IGHV4-38-2P0DP08 117 aa5.42□□□□□ -1.54
COLCA1-205ENST00000620864 MYCNOSP40205 109 aa5.42□□□□□ -1.54
COLCA1-205ENST00000620864 KLK12Q9UKR0 248 aa5.42□□□□□ -1.54
COLCA1-205ENST00000620864 PCDH15Q96QU1 1955 aa5.41□□□□□ -1.54
COLCA1-205ENST00000620864 TECTAO75443 2155 aa5.41□□□□□ -1.54
COLCA1-205ENST00000620864 M0R378 163 aa5.41□□□□□ -1.54
COLCA1-205ENST00000620864 REG3AQ06141 175 aa5.41□□□□□ -1.54
COLCA1-205ENST00000620864 AJUBAQ96IF1 538 aa5.41□□□□□ -1.54
COLCA1-205ENST00000620864 DAZAP2Q15038 168 aaPredicted RBP5.41□□□□□ -1.54
COLCA1-205ENST00000620864 CSPG4Q6UVK1 2322 aa5.41□□□□□ -1.54
COLCA1-205ENST00000620864 RPS28P62857 69 aaKnown RBP5.41□□□□□ -1.54
COLCA1-205ENST00000620864 MALRD1Q5VYJ5 2156 aa5.41□□□□□ -1.54
COLCA1-205ENST00000620864 NCOA6Q14686 2063 aaPredicted RBP5.4□□□□□ -1.54
COLCA1-205ENST00000620864 A0A087WZ39 114 aa5.4□□□□□ -1.54
COLCA1-205ENST00000620864 TRBV6-5A0A0K0K1A5 114 aa5.4□□□□□ -1.54
COLCA1-205ENST00000620864 A0A1W2PNU3 283 aaPredicted RBP5.4□□□□□ -1.54
COLCA1-205ENST00000620864 C3orf84H3BNL1 204 aa5.4□□□□□ -1.54
COLCA1-205ENST00000620864 SPRY2O43597 315 aa5.4□□□□□ -1.54
COLCA1-205ENST00000620864 hDV103S1A0JD37 113 aa5.4□□□□□ -1.54
COLCA1-205ENST00000620864 BCE1O60756 84 aa5.4□□□□□ -1.54
COLCA1-205ENST00000620864 C5orf56Q8N8D9 126 aa5.4□□□□□ -1.54
COLCA1-205ENST00000620864 Q8NA96 180 aa5.4□□□□□ -1.54
COLCA1-205ENST00000620864 IGLV4-3A0A075B6K6 122 aa5.4□□□□□ -1.54
COLCA1-205ENST00000620864 A0A0J9YWU9 116 aa5.4□□□□□ -1.54
COLCA1-205ENST00000620864 Q8N9W7 124 aa5.4□□□□□ -1.54
COLCA1-205ENST00000620864 ABCA2Q9BZC7 2435 aa5.4□□□□□ -1.55
COLCA1-205ENST00000620864 HIGD2AQ9BW72 106 aa5.4□□□□□ -1.55
COLCA1-205ENST00000620864 MUC4Q99102 2169 aa5.4□□□□□ -1.55
COLCA1-205ENST00000620864 RSPO1Q2MKA7 263 aaPredicted RBP5.4□□□□□ -1.55
COLCA1-205ENST00000620864 FAM19A1Q7Z5A9 133 aa5.4□□□□□ -1.55
COLCA1-205ENST00000620864 ZFAND3Q9H8U3 227 aa5.4□□□□□ -1.55
COLCA1-205ENST00000620864 C11orf1Q9H5F2 150 aa5.4□□□□□ -1.55
COLCA1-205ENST00000620864 MRGPRG-AS1Q2M3A8 158 aa5.39□□□□□ -1.55
COLCA1-205ENST00000620864 SMR3AQ99954 134 aa5.39□□□□□ -1.55
COLCA1-205ENST00000620864 C1orf158Q8N1D5 194 aa5.39□□□□□ -1.55
COLCA1-205ENST00000620864 CHCHD10Q8WYQ3 142 aaPredicted RBP5.39□□□□□ -1.55
COLCA1-205ENST00000620864 CELA1Q9UNI1 258 aa5.39□□□□□ -1.55
COLCA1-205ENST00000620864 DSCAML1Q8TD84 2053 aa5.39□□□□□ -1.55
COLCA1-205ENST00000620864 RPL28P46779 137 aaKnown RBP5.39□□□□□ -1.55
COLCA1-205ENST00000620864 ATG2AQ2TAZ0 1938 aa5.39□□□□□ -1.55
COLCA1-205ENST00000620864 A0A096LNI7 61 aa5.39□□□□□ -1.55
COLCA1-205ENST00000620864 SCXQ7RTU7 201 aa5.39□□□□□ -1.55
COLCA1-205ENST00000620864 MBD6Q96DN6 1003 aa5.39□□□□□ -1.55
COLCA1-205ENST00000620864 CUL9Q8IWT3 2517 aa5.39□□□□□ -1.55
COLCA1-205ENST00000620864 IGFL2Q6UWQ7 119 aa5.38□□□□□ -1.55
COLCA1-205ENST00000620864 TRBV10-3A0A0K0K1G6 114 aa5.38□□□□□ -1.55
COLCA1-205ENST00000620864 DIAPH2-AS1Q14236 149 aa5.38□□□□□ -1.55
COLCA1-205ENST00000620864 C6orf99Q4VX62 202 aa5.38□□□□□ -1.55
COLCA1-205ENST00000620864 C11orf53Q8IXP5 236 aa5.38□□□□□ -1.55
COLCA1-205ENST00000620864 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.38□□□□□ -1.55
COLCA1-205ENST00000620864 C2orf16Q68DN1 1984 aa5.38□□□□□ -1.55
COLCA1-205ENST00000620864 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.38□□□□□ -1.55
COLCA1-205ENST00000620864 LINC00322Q6ZN03 302 aaPredicted RBP5.38□□□□□ -1.55
COLCA1-205ENST00000620864 C2orf91Q6ZV80 131 aa5.38□□□□□ -1.55
COLCA1-205ENST00000620864 CDKN2A-AS1Q9UH64 79 aa5.38□□□□□ -1.55
COLCA1-205ENST00000620864 C2CD3Q4AC94 2353 aa5.38□□□□□ -1.55
COLCA1-205ENST00000620864 LINC00474Q9P2X8 69 aa5.38□□□□□ -1.55
COLCA1-205ENST00000620864 TRBV7-6A0A0J9YX20 115 aa5.38□□□□□ -1.55
COLCA1-205ENST00000620864 TRBV7-7A0A0K0K1E9 115 aa5.38□□□□□ -1.55
COLCA1-205ENST00000620864 TRBV6-4A0A1B0GX49 114 aa5.38□□□□□ -1.55
COLCA1-205ENST00000620864 DNAJC9-AS1A6NH13 148 aa5.37□□□□□ -1.55
COLCA1-205ENST00000620864 PRAC2D3DTV9 90 aa5.37□□□□□ -1.55
COLCA1-205ENST00000620864 IGLV2-8P01709 118 aa5.37□□□□□ -1.55
COLCA1-205ENST00000620864 LINC00269Q8N2A0 174 aa5.37□□□□□ -1.55
COLCA1-205ENST00000620864 LINC00467Q9BRT7 94 aa5.37□□□□□ -1.55
COLCA1-205ENST00000620864 NTM-AS1Q6ZSK4 140 aa5.37□□□□□ -1.55
COLCA1-205ENST00000620864 ESRGQ1W209 222 aa5.36□□□□□ -1.55
COLCA1-205ENST00000620864 CD164L2Q6UWJ8 174 aa5.36□□□□□ -1.55
COLCA1-205ENST00000620864 PROK2Q9HC23 129 aa5.36□□□□□ -1.55
COLCA1-205ENST00000620864 DEFB131BA0A096LNP1 70 aa5.36□□□□□ -1.55
COLCA1-205ENST00000620864 F8WDY8 70 aa5.36□□□□□ -1.55
COLCA1-205ENST00000620864 C1orf134Q5TEV5 83 aa5.36□□□□□ -1.55
COLCA1-205ENST00000620864 Q6ZVQ6 151 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms