RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 Q8N6K4 173 aa9.37□□□□□ -0.91
TNFAIP3-206ENST00000612899 H0YGX0 51 aa9.37□□□□□ -0.91
TNFAIP3-206ENST00000612899 NDUFC2-KCTD14E9PQ53 114 aa9.36□□□□□ -0.91
TNFAIP3-206ENST00000612899 IGLV2-11P01706 119 aa9.36□□□□□ -0.91
TNFAIP3-206ENST00000612899 LRP4O75096 1905 aa9.36□□□□□ -0.91
TNFAIP3-206ENST00000612899 ODF3Q96PU9 254 aa9.36□□□□□ -0.91
TNFAIP3-206ENST00000612899 ETDCA0A1B0GVM5 59 aa9.36□□□□□ -0.91
TNFAIP3-206ENST00000612899 F8W735 103 aaPredicted RBP9.36□□□□□ -0.91
TNFAIP3-206ENST00000612899 INAFM1C9JVW0 142 aa9.36□□□□□ -0.91
TNFAIP3-206ENST00000612899 COX7CP15954 63 aa9.36□□□□□ -0.91
TNFAIP3-206ENST00000612899 PPDPFQ9H3Y8 114 aa9.35□□□□□ -0.91
TNFAIP3-206ENST00000612899 NDUFA1O15239 70 aa9.35□□□□□ -0.91
TNFAIP3-206ENST00000612899 CXCL5P42830 114 aa9.35□□□□□ -0.91
TNFAIP3-206ENST00000612899 FAM222AQ5U5X8 452 aa9.34□□□□□ -0.91
TNFAIP3-206ENST00000612899 CLEC2BQ92478 149 aa9.34□□□□□ -0.91
TNFAIP3-206ENST00000612899 LECT2O14960 151 aa9.34□□□□□ -0.91
TNFAIP3-206ENST00000612899 TCL1BO95988 128 aa9.34□□□□□ -0.91
TNFAIP3-206ENST00000612899 PSMB8P28062 276 aa9.33□□□□□ -0.92
TNFAIP3-206ENST00000612899 CFAP126Q5VTH2 177 aa9.33□□□□□ -0.92
TNFAIP3-206ENST00000612899 CDKN2A-AS1Q9UH64 79 aa9.33□□□□□ -0.92
TNFAIP3-206ENST00000612899 C2orf91Q6ZV80 131 aa9.33□□□□□ -0.92
TNFAIP3-206ENST00000612899 LINC00467Q9BRT7 94 aa9.33□□□□□ -0.92
TNFAIP3-206ENST00000612899 NCR3O14931 201 aa9.33□□□□□ -0.92
TNFAIP3-206ENST00000612899 PROK1P58294 105 aa9.32□□□□□ -0.92
TNFAIP3-206ENST00000612899 RNF185Q96GF1 192 aa9.32□□□□□ -0.92
TNFAIP3-206ENST00000612899 C11orf21Q9P2W6 132 aa9.32□□□□□ -0.92
TNFAIP3-206ENST00000612899 PRO0628Q9UI54 55 aa9.32□□□□□ -0.92
TNFAIP3-206ENST00000612899 TNRC6BQ9UPQ9 1833 aaKnown RBP9.32□□□□□ -0.92
TNFAIP3-206ENST00000612899 NDUFA11Q86Y39 141 aa9.31□□□□□ -0.92
TNFAIP3-206ENST00000612899 LINC00482Q8N8I6 264 aa9.31□□□□□ -0.92
TNFAIP3-206ENST00000612899 NEXN-AS1Q8NBZ9 246 aa9.31□□□□□ -0.92
TNFAIP3-206ENST00000612899 AVPP01185 164 aa9.31□□□□□ -0.92
TNFAIP3-206ENST00000612899 IGKV2D-26A0A0A0MRZ7 120 aa9.31□□□□□ -0.92
TNFAIP3-206ENST00000612899 M0QY20 66 aa9.31□□□□□ -0.92
TNFAIP3-206ENST00000612899 NFE4Q86UQ8 179 aa9.31□□□□□ -0.92
TNFAIP3-206ENST00000612899 PRR9Q5T870 116 aa9.31□□□□□ -0.92
TNFAIP3-206ENST00000612899 A0A0J9YXY3 114 aa9.3□□□□□ -0.92
TNFAIP3-206ENST00000612899 LINC00269Q8N2A0 174 aa9.3□□□□□ -0.92
TNFAIP3-206ENST00000612899 LINC00526Q96FQ7 95 aa9.3□□□□□ -0.92
TNFAIP3-206ENST00000612899 ATG2AQ2TAZ0 1938 aa9.3□□□□□ -0.92
TNFAIP3-206ENST00000612899 SERP2Q8N6R1 65 aa9.3□□□□□ -0.92
TNFAIP3-206ENST00000612899 Q8N976 141 aa9.3□□□□□ -0.92
TNFAIP3-206ENST00000612899 ZNF702PQ9H963 129 aa9.3□□□□□ -0.92
TNFAIP3-206ENST00000612899 IGLV4-3A0A075B6K6 122 aa9.3□□□□□ -0.92
TNFAIP3-206ENST00000612899 C18orf65Q6ZTR6 163 aa9.3□□□□□ -0.92
TNFAIP3-206ENST00000612899 IGHV4-28A0A0C4DH34 117 aa9.3□□□□□ -0.92
TNFAIP3-206ENST00000612899 PSMG3-AS1Q96PY0 264 aa9.3□□□□□ -0.92
TNFAIP3-206ENST00000612899 IGKV3D-7A0A0C4DH55 119 aa9.29□□□□□ -0.92
TNFAIP3-206ENST00000612899 PRM2P04554 102 aa9.29□□□□□ -0.92
TNFAIP3-206ENST00000612899 TIRAPP58753 221 aa9.29□□□□□ -0.92
TNFAIP3-206ENST00000612899 SMIM26A0A096LP01 95 aa9.29□□□□□ -0.92
TNFAIP3-206ENST00000612899 RNASE3P12724 160 aaKnown RBP9.29□□□□□ -0.92
TNFAIP3-206ENST00000612899 ATP5EP56381 51 aaPredicted RBP9.29□□□□□ -0.92
TNFAIP3-206ENST00000612899 ZNF22P17026 224 aaPredicted RBP9.29□□□□□ -0.92
TNFAIP3-206ENST00000612899 A0A1W2PPR1 153 aa9.29□□□□□ -0.92
TNFAIP3-206ENST00000612899 LINC01006Q8NI28 216 aa9.29□□□□□ -0.92
TNFAIP3-206ENST00000612899 MIAQ16674 131 aa9.28□□□□□ -0.92
TNFAIP3-206ENST00000612899 GAS8-AS1O95177 125 aa9.28□□□□□ -0.92
TNFAIP3-206ENST00000612899 FUSP35637 526 aaKnown RBP eCLIP9.28□□□□□ -0.92
TNFAIP3-206ENST00000612899 HIGD2BQ4VC39 106 aa9.28□□□□□ -0.92
TNFAIP3-206ENST00000612899 MAPKAPK5-AS1Q8N8E1 139 aa9.28□□□□□ -0.92
TNFAIP3-206ENST00000612899 WFDC10AQ9H1F0 79 aa9.27□□□□□ -0.92
TNFAIP3-206ENST00000612899 REG3AQ06141 175 aa9.27□□□□□ -0.93
TNFAIP3-206ENST00000612899 C11orf45Q8TAV5 145 aa9.27□□□□□ -0.93
TNFAIP3-206ENST00000612899 RETNQ9HD89 108 aa9.27□□□□□ -0.93
TNFAIP3-206ENST00000612899 U3KQK5 164 aa9.26□□□□□ -0.93
TNFAIP3-206ENST00000612899 IGLV1-40P01703 118 aa9.26□□□□□ -0.93
TNFAIP3-206ENST00000612899 FLNBO75369 2602 aaKnown RBP9.26□□□□□ -0.93
TNFAIP3-206ENST00000612899 TRBV27A0A0K0K1C4 114 aa9.26□□□□□ -0.93
TNFAIP3-206ENST00000612899 TEX49A0A1B0GTD5 131 aa9.26□□□□□ -0.93
TNFAIP3-206ENST00000612899 C20orf197Q8N268 126 aa9.25□□□□□ -0.93
TNFAIP3-206ENST00000612899 RPS28P62857 69 aaKnown RBP9.25□□□□□ -0.93
TNFAIP3-206ENST00000612899 NRACQ8N912 160 aa9.25□□□□□ -0.93
TNFAIP3-206ENST00000612899 KLLNB2CW77 178 aa9.25□□□□□ -0.93
TNFAIP3-206ENST00000612899 DIRC1Q969H9 104 aa9.25□□□□□ -0.93
TNFAIP3-206ENST00000612899 KRTAP10-9P60411 292 aa9.24□□□□□ -0.93
TNFAIP3-206ENST00000612899 LYRM9A8MSI8 78 aa9.24□□□□□ -0.93
TNFAIP3-206ENST00000612899 DCANP1Q8TF63 244 aa9.24□□□□□ -0.93
TNFAIP3-206ENST00000612899 LY6G6DO95868 133 aa9.24□□□□□ -0.93
TNFAIP3-206ENST00000612899 LINC00310P59036 64 aa9.24□□□□□ -0.93
TNFAIP3-206ENST00000612899 CHCHD10Q8WYQ3 142 aaPredicted RBP9.24□□□□□ -0.93
TNFAIP3-206ENST00000612899 MRPS36P82909 103 aaKnown RBP9.23□□□□□ -0.93
TNFAIP3-206ENST00000612899 TRBV6-8A0A0A6YYG3 113 aa9.23□□□□□ -0.93
TNFAIP3-206ENST00000612899 TMEM223A0PJW6 202 aa9.23□□□□□ -0.93
TNFAIP3-206ENST00000612899 A8MZ25 164 aa9.23□□□□□ -0.93
TNFAIP3-206ENST00000612899 NDUFC1O43677 76 aa9.23□□□□□ -0.93
TNFAIP3-206ENST00000612899 EML5Q05BV3 1969 aa9.22□□□□□ -0.93
TNFAIP3-206ENST00000612899 EDN2P20800 178 aa9.22□□□□□ -0.93
TNFAIP3-206ENST00000612899 IGKV2-24A0A0C4DH68 120 aa9.22□□□□□ -0.93
TNFAIP3-206ENST00000612899 TRBV6-5A0A0K0K1A5 114 aa9.22□□□□□ -0.93
TNFAIP3-206ENST00000612899 JMJD7-PLA2G4BH0Y9G9 81 aa9.22□□□□□ -0.93
TNFAIP3-206ENST00000612899 PIK3CD-AS1Q5SR53 167 aa9.22□□□□□ -0.93
TNFAIP3-206ENST00000612899 SERP1Q9Y6X1 66 aa9.22□□□□□ -0.93
TNFAIP3-206ENST00000612899 CRYGDP07320 174 aa9.22□□□□□ -0.93
TNFAIP3-206ENST00000612899 NREPQ16612 68 aa9.22□□□□□ -0.93
TNFAIP3-206ENST00000612899 TRBV6-4A0A1B0GX49 114 aa9.22□□□□□ -0.93
TNFAIP3-206ENST00000612899 DEFB131BA0A096LNP1 70 aa9.21□□□□□ -0.93
TNFAIP3-206ENST00000612899 BBC3Q96PG8 261 aaPredicted RBP9.21□□□□□ -0.93
TNFAIP3-206ENST00000612899 LOC107984640A0A0U1RRK4 108 aa9.21□□□□□ -0.94
TNFAIP3-206ENST00000612899 NDUFS5O43920 106 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms