RNA–Protein interactions for RNA: ENST00000601011.1

NOTCH3-206, Transcript of notch 3, humanhuman

TSL 5

Gene NOTCH3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-206ENST00000601011 ZNF580Q9UK33 172 aa9.4□□□□□ -0.9
NOTCH3-206ENST00000601011 NXPH4O95158 308 aa9.4□□□□□ -0.91
NOTCH3-206ENST00000601011 CIRBPQ14011 172 aaKnown RBP9.4□□□□□ -0.91
NOTCH3-206ENST00000601011 C5orf38Q86SI9 138 aa9.39□□□□□ -0.91
NOTCH3-206ENST00000601011 TEN1Q86WV5 123 aa9.39□□□□□ -0.91
NOTCH3-206ENST00000601011 F5H768 121 aa9.39□□□□□ -0.91
NOTCH3-206ENST00000601011 CFC1BP0CG36 223 aa9.39□□□□□ -0.91
NOTCH3-206ENST00000601011 CFC1P0CG37 223 aa9.39□□□□□ -0.91
NOTCH3-206ENST00000601011 DEFB114Q30KQ6 69 aa9.39□□□□□ -0.91
NOTCH3-206ENST00000601011 PAPPA-AS1Q5QFB9 102 aa9.39□□□□□ -0.91
NOTCH3-206ENST00000601011 LINC01006Q8NI28 216 aa9.39□□□□□ -0.91
NOTCH3-206ENST00000601011 CARD19Q96LW7 228 aa9.39□□□□□ -0.91
NOTCH3-206ENST00000601011 LOC100131303A0A0U1RQF7 123 aa9.39□□□□□ -0.91
NOTCH3-206ENST00000601011 ATXN8Q156A1 80 aa9.39□□□□□ -0.91
NOTCH3-206ENST00000601011 PRIMA1Q86XR5 153 aa9.39□□□□□ -0.91
NOTCH3-206ENST00000601011 UBE2WQ96B02 151 aa9.39□□□□□ -0.91
NOTCH3-206ENST00000601011 K7EMT4 169 aa9.38□□□□□ -0.91
NOTCH3-206ENST00000601011 PRB2P02812 416 aaPredicted RBP9.38□□□□□ -0.91
NOTCH3-206ENST00000601011 LINC00158P58513 81 aa9.38□□□□□ -0.91
NOTCH3-206ENST00000601011 LENEPQ9Y5L5 61 aa9.38□□□□□ -0.91
NOTCH3-206ENST00000601011 IFITM1P13164 125 aa9.38□□□□□ -0.91
NOTCH3-206ENST00000601011 NDUFA12Q9UI09 145 aa9.38□□□□□ -0.91
NOTCH3-206ENST00000601011 CRIP2P52943 208 aaPredicted RBP9.38□□□□□ -0.91
NOTCH3-206ENST00000601011 TRBV6-1A0A0K0K1D8 114 aa9.37□□□□□ -0.91
NOTCH3-206ENST00000601011 HIST1H4AP62805 103 aaKnown RBP9.37□□□□□ -0.91
NOTCH3-206ENST00000601011 HERV-K104P63124 156 aa9.37□□□□□ -0.91
NOTCH3-206ENST00000601011 CRLF1O75462 422 aa9.37□□□□□ -0.91
NOTCH3-206ENST00000601011 CITED1Q99966 193 aa9.37□□□□□ -0.91
NOTCH3-206ENST00000601011 XCL1P47992 114 aa9.36□□□□□ -0.91
NOTCH3-206ENST00000601011 HIGD1BQ9P298 99 aa9.36□□□□□ -0.91
NOTCH3-206ENST00000601011 NFE4Q86UQ8 179 aa9.36□□□□□ -0.91
NOTCH3-206ENST00000601011 NDUFA11Q86Y39 141 aa9.36□□□□□ -0.91
NOTCH3-206ENST00000601011 TM2D2Q9BX73 214 aa9.36□□□□□ -0.91
NOTCH3-206ENST00000601011 TRAV4A0A0B4J268 109 aa9.35□□□□□ -0.91
NOTCH3-206ENST00000601011 C9orf153Q5TBE3 101 aa9.35□□□□□ -0.91
NOTCH3-206ENST00000601011 TMEM141Q96I45 108 aa9.34□□□□□ -0.91
NOTCH3-206ENST00000601011 TINCRA0A1B0GVN0 87 aa9.34□□□□□ -0.91
NOTCH3-206ENST00000601011 LY6G6DO95868 133 aa9.34□□□□□ -0.91
NOTCH3-206ENST00000601011 CCDC179H3BU77 68 aa9.33□□□□□ -0.92
NOTCH3-206ENST00000601011 RBMY1A1P0DJD3 496 aaKnown RBP9.33□□□□□ -0.92
NOTCH3-206ENST00000601011 RBMY1CP0DJD4 496 aa9.33□□□□□ -0.92
NOTCH3-206ENST00000601011 RBMY1FQ15415 496 aaKnown RBP9.33□□□□□ -0.92
NOTCH3-206ENST00000601011 C4orf3Q8WVX3 66 aa9.33□□□□□ -0.92
NOTCH3-206ENST00000601011 LINC00467Q9BRT7 94 aa9.33□□□□□ -0.92
NOTCH3-206ENST00000601011 TAL2Q16559 108 aa9.33□□□□□ -0.92
NOTCH3-206ENST00000601011 Q6ZSN1 163 aa9.33□□□□□ -0.92
NOTCH3-206ENST00000601011 TOMM6Q96B49 74 aa9.33□□□□□ -0.92
NOTCH3-206ENST00000601011 FAM110AQ9BQ89 295 aa9.33□□□□□ -0.92
NOTCH3-206ENST00000601011 M0QY20 66 aa9.33□□□□□ -0.92
NOTCH3-206ENST00000601011 SOCS3O14543 225 aa9.33□□□□□ -0.92
NOTCH3-206ENST00000601011 CRYGDP07320 174 aa9.33□□□□□ -0.92
NOTCH3-206ENST00000601011 VWFP04275 2813 aa9.33□□□□□ -0.92
NOTCH3-206ENST00000601011 ODF3L2Q3SX64 289 aa9.32□□□□□ -0.92
NOTCH3-206ENST00000601011 LINC01620Q4KN68 170 aa9.32□□□□□ -0.92
NOTCH3-206ENST00000601011 OTOGQ6ZRI0 2925 aa9.32□□□□□ -0.92
NOTCH3-206ENST00000601011 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.32□□□□□ -0.92
NOTCH3-206ENST00000601011 FAM236AA0A1B0GUQ0 79 aa9.32□□□□□ -0.92
NOTCH3-206ENST00000601011 FAM236BA0A1B0GV22 79 aa9.32□□□□□ -0.92
NOTCH3-206ENST00000601011 KLLNB2CW77 178 aa9.32□□□□□ -0.92
NOTCH3-206ENST00000601011 PAX4O43316 350 aa9.32□□□□□ -0.92
NOTCH3-206ENST00000601011 C6orf226Q5I0X4 101 aa9.31□□□□□ -0.92
NOTCH3-206ENST00000601011 Q9H8V8 135 aa9.31□□□□□ -0.92
NOTCH3-206ENST00000601011 U3KQK5 164 aa9.31□□□□□ -0.92
NOTCH3-206ENST00000601011 TRAV12-1A0A0B4J245 112 aa9.31□□□□□ -0.92
NOTCH3-206ENST00000601011 MORN3Q6PF18 240 aaPredicted RBP9.31□□□□□ -0.92
NOTCH3-206ENST00000601011 PSMG3-AS1Q96PY0 264 aa9.31□□□□□ -0.92
NOTCH3-206ENST00000601011 MALP21145 153 aa9.31□□□□□ -0.92
NOTCH3-206ENST00000601011 FBN1P35555 2871 aaKnown RBP9.31□□□□□ -0.92
NOTCH3-206ENST00000601011 RBMY1BA6NDE4 496 aaKnown RBP9.31□□□□□ -0.92
NOTCH3-206ENST00000601011 RBMY1EA6NEQ0 496 aaKnown RBP9.31□□□□□ -0.92
NOTCH3-206ENST00000601011 RBMY1DP0C7P1 496 aaKnown RBP9.31□□□□□ -0.92
NOTCH3-206ENST00000601011 IGKV3D-7A0A0C4DH55 119 aa9.3□□□□□ -0.92
NOTCH3-206ENST00000601011 GYPEP15421 78 aa9.3□□□□□ -0.92
NOTCH3-206ENST00000601011 C20orf203Q8NBC4 194 aa9.3□□□□□ -0.92
NOTCH3-206ENST00000601011 LINC00526Q96FQ7 95 aa9.3□□□□□ -0.92
NOTCH3-206ENST00000601011 Q9HAA7 133 aa9.3□□□□□ -0.92
NOTCH3-206ENST00000601011 ANGP03950 147 aaKnown RBP9.29□□□□□ -0.92
NOTCH3-206ENST00000601011 DAD1P61803 113 aa9.29□□□□□ -0.92
NOTCH3-206ENST00000601011 CFAP126Q5VTH2 177 aa9.29□□□□□ -0.92
NOTCH3-206ENST00000601011 CDKN2A-AS1Q9UH64 79 aa9.29□□□□□ -0.92
NOTCH3-206ENST00000601011 PDZD2O15018 2839 aa9.29□□□□□ -0.92
NOTCH3-206ENST00000601011 ZNF575Q86XF7 245 aa9.29□□□□□ -0.92
NOTCH3-206ENST00000601011 NEXN-AS1Q8NBZ9 246 aa9.29□□□□□ -0.92
NOTCH3-206ENST00000601011 TENM1Q9UKZ4 2725 aa9.28□□□□□ -0.92
NOTCH3-206ENST00000601011 TRBV7-3A0A075B6L6 115 aa9.28□□□□□ -0.92
NOTCH3-206ENST00000601011 TSPEAR-AS2P59090 65 aa9.28□□□□□ -0.92
NOTCH3-206ENST00000601011 TMEM243Q9BU79 118 aa9.28□□□□□ -0.92
NOTCH3-206ENST00000601011 SLC25A29Q8N8R3 303 aa9.28□□□□□ -0.92
NOTCH3-206ENST00000601011 RHODO00212 210 aa9.28□□□□□ -0.92
NOTCH3-206ENST00000601011 NDUFV3P56181 108 aaKnown RBP9.27□□□□□ -0.93
NOTCH3-206ENST00000601011 OXLD1Q5BKU9 147 aa9.27□□□□□ -0.93
NOTCH3-206ENST00000601011 IGHV3-30-3P0DP02 117 aa9.26□□□□□ -0.93
NOTCH3-206ENST00000601011 IGLV4-3A0A075B6K6 122 aa9.26□□□□□ -0.93
NOTCH3-206ENST00000601011 CNFNQ9BYD5 112 aa9.25□□□□□ -0.93
NOTCH3-206ENST00000601011 TRIAP1O43715 76 aa9.25□□□□□ -0.93
NOTCH3-206ENST00000601011 ICOSQ9Y6W8 199 aa9.25□□□□□ -0.93
NOTCH3-206ENST00000601011 ZNF469Q96JG9 3925 aaPredicted RBP9.25□□□□□ -0.93
NOTCH3-206ENST00000601011 TSHBP01222 138 aa9.25□□□□□ -0.93
NOTCH3-206ENST00000601011 SPATA25Q9BR10 227 aa9.25□□□□□ -0.93
NOTCH3-206ENST00000601011 IGHV3-30P01768 117 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms