RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 G3V4G9 280 aa13.69□□□□□ -0.22
PRKCSH-209ENST00000589838 LY6G6DO95868 133 aa13.69□□□□□ -0.22
PRKCSH-209ENST00000589838 NDUFA12Q9UI09 145 aa13.69□□□□□ -0.22
PRKCSH-209ENST00000589838 IGLV5-45A0A087WSX0 123 aa13.68□□□□□ -0.22
PRKCSH-209ENST00000589838 TRAV8-3A0A0A6YYJ7 113 aa13.68□□□□□ -0.22
PRKCSH-209ENST00000589838 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.68□□□□□ -0.22
PRKCSH-209ENST00000589838 GTSF1LQ9H1H1 148 aa13.68□□□□□ -0.22
PRKCSH-209ENST00000589838 ACANP16112 2415 aa13.68□□□□□ -0.22
PRKCSH-209ENST00000589838 TRBV6-4A0A1B0GX49 114 aa13.67□□□□□ -0.22
PRKCSH-209ENST00000589838 GAGE12JA6NER3 117 aa13.67□□□□□ -0.22
PRKCSH-209ENST00000589838 GAGE7O76087 117 aa13.67□□□□□ -0.22
PRKCSH-209ENST00000589838 GAGE12FP0CL80 117 aa13.67□□□□□ -0.22
PRKCSH-209ENST00000589838 GAGE12GP0CL81 117 aa13.67□□□□□ -0.22
PRKCSH-209ENST00000589838 GAGE12IP0CL82 117 aa13.67□□□□□ -0.22
PRKCSH-209ENST00000589838 HERVK_113P63121 156 aa13.67□□□□□ -0.22
PRKCSH-209ENST00000589838 GAGE4Q13068 117 aa13.67□□□□□ -0.22
PRKCSH-209ENST00000589838 GAGE5Q13069 117 aa13.67□□□□□ -0.22
PRKCSH-209ENST00000589838 MUSTN1Q8IVN3 82 aa13.67□□□□□ -0.22
PRKCSH-209ENST00000589838 LOC107984156A0A0G2JMH3 177 aa13.67□□□□□ -0.22
PRKCSH-209ENST00000589838 SPINK8P0C7L1 97 aa13.67□□□□□ -0.22
PRKCSH-209ENST00000589838 FAM19A3Q7Z5A8 133 aa13.67□□□□□ -0.22
PRKCSH-209ENST00000589838 ARL17AQ8IVW1 177 aa13.67□□□□□ -0.22
PRKCSH-209ENST00000589838 ANK3Q12955 4377 aaKnown RBP13.67□□□□□ -0.22
PRKCSH-209ENST00000589838 A4D1N5 150 aa13.66□□□□□ -0.22
PRKCSH-209ENST00000589838 LINC00482Q8N8I6 264 aa13.66□□□□□ -0.22
PRKCSH-209ENST00000589838 NF1P21359 2839 aa13.66□□□□□ -0.22
PRKCSH-209ENST00000589838 A0A0B4J2C4 111 aa13.65□□□□□ -0.22
PRKCSH-209ENST00000589838 ZFAND6Q6FIF0 208 aa13.65□□□□□ -0.22
PRKCSH-209ENST00000589838 SBSPONQ8IVN8 264 aa13.65□□□□□ -0.22
PRKCSH-209ENST00000589838 KRTAP10-3P60369 221 aa13.65□□□□□ -0.22
PRKCSH-209ENST00000589838 NTM-AS1Q6ZSK4 140 aa13.65□□□□□ -0.22
PRKCSH-209ENST00000589838 SPANXDQ9BXN6 97 aa13.65□□□□□ -0.22
PRKCSH-209ENST00000589838 SPANXCQ9NY87 97 aa13.65□□□□□ -0.22
PRKCSH-209ENST00000589838 TRBV20-1A0A075B6N2 111 aa13.64□□□□□ -0.23
PRKCSH-209ENST00000589838 TRGV4A0A0C4DH28 118 aa13.64□□□□□ -0.23
PRKCSH-209ENST00000589838 H7C423 109 aa13.64□□□□□ -0.23
PRKCSH-209ENST00000589838 WFDC2Q14508 124 aa13.64□□□□□ -0.23
PRKCSH-209ENST00000589838 TMEM243Q9BU79 118 aa13.64□□□□□ -0.23
PRKCSH-209ENST00000589838 CDKN2A-AS1Q9UH64 79 aa13.64□□□□□ -0.23
PRKCSH-209ENST00000589838 UBE2L6O14933 153 aa13.63□□□□□ -0.23
PRKCSH-209ENST00000589838 INSL3P51460 131 aa13.63□□□□□ -0.23
PRKCSH-209ENST00000589838 TMEM101Q96IK0 257 aa13.63□□□□□ -0.23
PRKCSH-209ENST00000589838 TIMM17BO60830 172 aa13.63□□□□□ -0.23
PRKCSH-209ENST00000589838 LINC00694P0DN24 101 aa13.63□□□□□ -0.23
PRKCSH-209ENST00000589838 PSMB2P49721 201 aa13.63□□□□□ -0.23
PRKCSH-209ENST00000589838 ITPR2Q14571 2701 aa13.62□□□□□ -0.23
PRKCSH-209ENST00000589838 LITAFQ99732 161 aa13.62□□□□□ -0.23
PRKCSH-209ENST00000589838 PRO0461Q9UI25 63 aa13.62□□□□□ -0.23
PRKCSH-209ENST00000589838 J3QR89 54 aa13.61□□□□□ -0.23
PRKCSH-209ENST00000589838 LINC00242Q5T6M2 205 aa13.61□□□□□ -0.23
PRKCSH-209ENST00000589838 CDC42SE2Q9NRR3 84 aa13.61□□□□□ -0.23
PRKCSH-209ENST00000589838 ERG28Q9UKR5 140 aa13.61□□□□□ -0.23
PRKCSH-209ENST00000589838 HIVEP2P31629 2446 aa13.61□□□□□ -0.23
PRKCSH-209ENST00000589838 NDUFA1O15239 70 aa13.61□□□□□ -0.23
PRKCSH-209ENST00000589838 TEX48A0A1B0GUV7 120 aa13.6□□□□□ -0.23
PRKCSH-209ENST00000589838 IGHV3-33P01772 117 aa13.6□□□□□ -0.23
PRKCSH-209ENST00000589838 PRSS2P07478 247 aa13.6□□□□□ -0.23
PRKCSH-209ENST00000589838 SCGB1C2P0DMR2 95 aa13.6□□□□□ -0.23
PRKCSH-209ENST00000589838 MIAQ16674 131 aa13.6□□□□□ -0.23
PRKCSH-209ENST00000589838 HELZ2Q9BYK8 2649 aaKnown RBP13.6□□□□□ -0.23
PRKCSH-209ENST00000589838 UNC79Q9P2D8 2635 aa13.59□□□□□ -0.23
PRKCSH-209ENST00000589838 RNF183Q96D59 192 aa13.59□□□□□ -0.23
PRKCSH-209ENST00000589838 IGLV5-39A0A0G2JS06 123 aa13.59□□□□□ -0.23
PRKCSH-209ENST00000589838 IFITM1P13164 125 aa13.59□□□□□ -0.23
PRKCSH-209ENST00000589838 COX6A2Q02221 97 aa13.59□□□□□ -0.23
PRKCSH-209ENST00000589838 CIRBPQ14011 172 aaKnown RBP13.59□□□□□ -0.23
PRKCSH-209ENST00000589838 C9orf66Q5T8R8 295 aa13.59□□□□□ -0.23
PRKCSH-209ENST00000589838 KIR2DL5BQ8NHK3 375 aa13.59□□□□□ -0.23
PRKCSH-209ENST00000589838 MTORP42345 2549 aa13.58□□□□□ -0.24
PRKCSH-209ENST00000589838 FHL2Q14192 279 aa13.58□□□□□ -0.24
PRKCSH-209ENST00000589838 SFTA2Q6UW10 78 aa13.58□□□□□ -0.24
PRKCSH-209ENST00000589838 A8MZ25 164 aa13.57□□□□□ -0.24
PRKCSH-209ENST00000589838 TRAV13-1A0A0B4J241 112 aa13.57□□□□□ -0.24
PRKCSH-209ENST00000589838 SMIM9A6NGZ8 99 aa13.57□□□□□ -0.24
PRKCSH-209ENST00000589838 PCP4P48539 62 aa13.57□□□□□ -0.24
PRKCSH-209ENST00000589838 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.57□□□□□ -0.24
PRKCSH-209ENST00000589838 ETDBQ3ZM63 59 aa13.56□□□□□ -0.24
PRKCSH-209ENST00000589838 ADAMTSL4-AS1Q5T5F5 129 aa13.56□□□□□ -0.24
PRKCSH-209ENST00000589838 LOC100131303A0A0U1RQF7 123 aa13.55□□□□□ -0.24
PRKCSH-209ENST00000589838 TCL1BO95988 128 aa13.55□□□□□ -0.24
PRKCSH-209ENST00000589838 INAFM1C9JVW0 142 aa13.55□□□□□ -0.24
PRKCSH-209ENST00000589838 EIF4EBP3O60516 100 aaPredicted RBP13.55□□□□□ -0.24
PRKCSH-209ENST00000589838 CRLF1O75462 422 aa13.55□□□□□ -0.24
PRKCSH-209ENST00000589838 ATP6V0E2Q8NHE4 81 aa13.55□□□□□ -0.24
PRKCSH-209ENST00000589838 Q1RN00 199 aa13.54□□□□□ -0.24
PRKCSH-209ENST00000589838 SH2D6Q7Z4S9 175 aa13.54□□□□□ -0.24
PRKCSH-209ENST00000589838 LINC00612Q8N6U2 182 aa13.54□□□□□ -0.24
PRKCSH-209ENST00000589838 COPS9Q8WXC6 57 aa13.54□□□□□ -0.24
PRKCSH-209ENST00000589838 SETD2Q9BYW2 2564 aaPredicted RBP13.54□□□□□ -0.24
PRKCSH-209ENST00000589838 SMIM1B2RUZ4 78 aa13.53□□□□□ -0.24
PRKCSH-209ENST00000589838 MTURNQ8N3F0 131 aa13.53□□□□□ -0.24
PRKCSH-209ENST00000589838 FASNP49327 2511 aaKnown RBP13.53□□□□□ -0.24
PRKCSH-209ENST00000589838 TRBV6-8A0A0A6YYG3 113 aa13.53□□□□□ -0.24
PRKCSH-209ENST00000589838 SETXQ7Z333 2677 aaKnown RBP13.53□□□□□ -0.24
PRKCSH-209ENST00000589838 Q9H8V8 135 aa13.52□□□□□ -0.25
PRKCSH-209ENST00000589838 H7C2G1 150 aa13.51□□□□□ -0.25
PRKCSH-209ENST00000589838 TRBV30A0A0K0K1B3 111 aa13.5□□□□□ -0.25
PRKCSH-209ENST00000589838 DEFB130BP0DP73 79 aa13.5□□□□□ -0.25
PRKCSH-209ENST00000589838 DEFB130AP0DP74 79 aa13.5□□□□□ -0.25
PRKCSH-209ENST00000589838 HERV-K104P63124 156 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms