RNA–Protein interactions for RNA: ENST00000580542.5

ITGB4-207, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-207ENST00000580542 NXPH4O95158 308 aa10.08□□□□□ -0.8
ITGB4-207ENST00000580542 TMEM86BQ8N661 226 aa10.08□□□□□ -0.8
ITGB4-207ENST00000580542 PTPN13Q12923 2485 aa10.08□□□□□ -0.8
ITGB4-207ENST00000580542 TRAV21A0A0B4J279 112 aa10.08□□□□□ -0.8
ITGB4-207ENST00000580542 GNRH2O43555 120 aa10.08□□□□□ -0.8
ITGB4-207ENST00000580542 DEFB113Q30KQ7 82 aa10.08□□□□□ -0.8
ITGB4-207ENST00000580542 TMEM243Q9BU79 118 aa10.08□□□□□ -0.8
ITGB4-207ENST00000580542 ZFHX3Q15911 3703 aa10.07□□□□□ -0.8
ITGB4-207ENST00000580542 IGHV4OR15-8A0A075B7B6 117 aa10.07□□□□□ -0.8
ITGB4-207ENST00000580542 A0A087WW49 117 aa10.07□□□□□ -0.8
ITGB4-207ENST00000580542 A0A087WWL8 130 aa10.07□□□□□ -0.8
ITGB4-207ENST00000580542 FAM236DA0A1B0GTK5 79 aa10.07□□□□□ -0.8
ITGB4-207ENST00000580542 FAM236CP0DP71 79 aa10.07□□□□□ -0.8
ITGB4-207ENST00000580542 FAM223AQ8IWN6 122 aa10.07□□□□□ -0.8
ITGB4-207ENST00000580542 WFDC11Q8NEX6 87 aa10.07□□□□□ -0.8
ITGB4-207ENST00000580542 A8MZ25 164 aa10.06□□□□□ -0.8
ITGB4-207ENST00000580542 NDUFC2O95298 119 aa10.06□□□□□ -0.8
ITGB4-207ENST00000580542 MSMBP08118 114 aa10.06□□□□□ -0.8
ITGB4-207ENST00000580542 LINC01561Q8N1V8 128 aa10.06□□□□□ -0.8
ITGB4-207ENST00000580542 MRPL53Q96EL3 112 aaKnown RBP10.06□□□□□ -0.8
ITGB4-207ENST00000580542 KRTAP1-3Q8IUG1 177 aa10.06□□□□□ -0.8
ITGB4-207ENST00000580542 FAM223BA6NKX1 122 aa10.05□□□□□ -0.8
ITGB4-207ENST00000580542 U3KQE9 123 aa10.05□□□□□ -0.8
ITGB4-207ENST00000580542 TRBV27A0A0K0K1C4 114 aa10.05□□□□□ -0.8
ITGB4-207ENST00000580542 B4DSR2 109 aa10.05□□□□□ -0.8
ITGB4-207ENST00000580542 C9orf139Q6ZV77 190 aa10.05□□□□□ -0.8
ITGB4-207ENST00000580542 C16orf92Q96LL3 132 aa10.05□□□□□ -0.8
ITGB4-207ENST00000580542 NDUFC2-KCTD14E9PQ53 114 aa10.04□□□□□ -0.8
ITGB4-207ENST00000580542 SAA4P35542 130 aa10.04□□□□□ -0.8
ITGB4-207ENST00000580542 LINC00315P59091 139 aa10.04□□□□□ -0.8
ITGB4-207ENST00000580542 Q6JHZ5 121 aa10.04□□□□□ -0.8
ITGB4-207ENST00000580542 CR1P17927 2039 aa10.04□□□□□ -0.8
ITGB4-207ENST00000580542 IGHV1-58A0A0C4DH39 117 aa10.04□□□□□ -0.8
ITGB4-207ENST00000580542 RNASE4P34096 147 aaKnown RBP10.04□□□□□ -0.8
ITGB4-207ENST00000580542 FAM74A4Q5TZK3 123 aa10.04□□□□□ -0.8
ITGB4-207ENST00000580542 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.04□□□□□ -0.8
ITGB4-207ENST00000580542 TRAV12-2A0A075B6T6 113 aa10.03□□□□□ -0.8
ITGB4-207ENST00000580542 A0A0U1RQV1 116 aa10.03□□□□□ -0.8
ITGB4-207ENST00000580542 RNASE3P12724 160 aaKnown RBP10.03□□□□□ -0.8
ITGB4-207ENST00000580542 RPL11P62913 178 aaKnown RBP10.03□□□□□ -0.8
ITGB4-207ENST00000580542 PRIMA1Q86XR5 153 aa10.03□□□□□ -0.8
ITGB4-207ENST00000580542 C20orf173Q96LM9 149 aa10.03□□□□□ -0.8
ITGB4-207ENST00000580542 Q9HAA7 133 aa10.03□□□□□ -0.8
ITGB4-207ENST00000580542 C22orf24Q9Y442 160 aa10.03□□□□□ -0.8
ITGB4-207ENST00000580542 KIF25-AS1Q9Y6Z4 181 aa10.03□□□□□ -0.8
ITGB4-207ENST00000580542 AKAP9Q99996 3911 aa10.03□□□□□ -0.8
ITGB4-207ENST00000580542 DOPEY2Q9Y3R5 2298 aa10.03□□□□□ -0.8
ITGB4-207ENST00000580542 PDZD2O15018 2839 aa10.03□□□□□ -0.8
ITGB4-207ENST00000580542 ABCA12Q86UK0 2595 aa10.03□□□□□ -0.8
ITGB4-207ENST00000580542 IGLV4-3A0A075B6K6 122 aa10.03□□□□□ -0.8
ITGB4-207ENST00000580542 POLQO75417 2590 aa10.02□□□□□ -0.8
ITGB4-207ENST00000580542 CIRBPQ14011 172 aaKnown RBP10.02□□□□□ -0.81
ITGB4-207ENST00000580542 C20orf197Q8N268 126 aa10.02□□□□□ -0.81
ITGB4-207ENST00000580542 ZFAND2AQ8N6M9 145 aa10.02□□□□□ -0.81
ITGB4-207ENST00000580542 LINC01356Q8N9X3 169 aa10.02□□□□□ -0.81
ITGB4-207ENST00000580542 SERP1Q9Y6X1 66 aa10.02□□□□□ -0.81
ITGB4-207ENST00000580542 MED14OSP0DP75 135 aa10.02□□□□□ -0.81
ITGB4-207ENST00000580542 BEAN1Q3B7T3 259 aa10.02□□□□□ -0.81
ITGB4-207ENST00000580542 C1orf195Q5TG92 126 aa10.02□□□□□ -0.81
ITGB4-207ENST00000580542 FAM222AQ5U5X8 452 aa10.02□□□□□ -0.81
ITGB4-207ENST00000580542 LINC00846Q9NV44 126 aa10.02□□□□□ -0.81
ITGB4-207ENST00000580542 CELSR1Q9NYQ6 3014 aa10.01□□□□□ -0.81
ITGB4-207ENST00000580542 GHRHP01286 108 aa10.01□□□□□ -0.81
ITGB4-207ENST00000580542 C14orf132Q9NPU4 83 aa10.01□□□□□ -0.81
ITGB4-207ENST00000580542 MAP1AP78559 2803 aaPredicted RBP10.01□□□□□ -0.81
ITGB4-207ENST00000580542 GCN1Q92616 2671 aaKnown RBP10.01□□□□□ -0.81
ITGB4-207ENST00000580542 A0A0U1RRA0 63 aa10.01□□□□□ -0.81
ITGB4-207ENST00000580542 RBMY1BA6NDE4 496 aaKnown RBP10.01□□□□□ -0.81
ITGB4-207ENST00000580542 RBMY1EA6NEQ0 496 aaKnown RBP10.01□□□□□ -0.81
ITGB4-207ENST00000580542 RBMY1DP0C7P1 496 aaKnown RBP10.01□□□□□ -0.81
ITGB4-207ENST00000580542 RBMY1A1P0DJD3 496 aaKnown RBP10.01□□□□□ -0.81
ITGB4-207ENST00000580542 RBMY1CP0DJD4 496 aa10.01□□□□□ -0.81
ITGB4-207ENST00000580542 CD28P10747 220 aa10.01□□□□□ -0.81
ITGB4-207ENST00000580542 RBMY1FQ15415 496 aaKnown RBP10.01□□□□□ -0.81
ITGB4-207ENST00000580542 Q8N2B8 174 aa10.01□□□□□ -0.81
ITGB4-207ENST00000580542 C5orf56Q8N8D9 126 aa10.01□□□□□ -0.81
ITGB4-207ENST00000580542 C20orf203Q8NBC4 194 aa10.01□□□□□ -0.81
ITGB4-207ENST00000580542 LENEPQ9Y5L5 61 aa10.01□□□□□ -0.81
ITGB4-207ENST00000580542 VSIG2Q96IQ7 327 aa10□□□□□ -0.81
ITGB4-207ENST00000580542 NAV2Q8IVL1 2488 aa10□□□□□ -0.81
ITGB4-207ENST00000580542 PSMB8P28062 276 aa10□□□□□ -0.81
ITGB4-207ENST00000580542 BRK1Q8WUW1 75 aa10□□□□□ -0.81
ITGB4-207ENST00000580542 RNASE13Q5GAN3 156 aaKnown RBP9.99□□□□□ -0.81
ITGB4-207ENST00000580542 FAM218AQ96MZ4 157 aa9.99□□□□□ -0.81
ITGB4-207ENST00000580542 MUC4Q99102 2169 aa9.99□□□□□ -0.81
ITGB4-207ENST00000580542 ZNF469Q96JG9 3925 aaPredicted RBP9.99□□□□□ -0.81
ITGB4-207ENST00000580542 IGHG2P01859 326 aa9.99□□□□□ -0.81
ITGB4-207ENST00000580542 HOXD3P31249 432 aaPredicted RBP9.99□□□□□ -0.81
ITGB4-207ENST00000580542 DEFB1P60022 68 aa9.99□□□□□ -0.81
ITGB4-207ENST00000580542 AVPP01185 164 aa9.98□□□□□ -0.81
ITGB4-207ENST00000580542 FSHBP01225 129 aa9.98□□□□□ -0.81
ITGB4-207ENST00000580542 IGHV4-31P0DP07 118 aa9.98□□□□□ -0.81
ITGB4-207ENST00000580542 IGHV4-38-2P0DP08 117 aa9.98□□□□□ -0.81
ITGB4-207ENST00000580542 C19orf54Q5BKX5 351 aa9.98□□□□□ -0.81
ITGB4-207ENST00000580542 UBE2D4Q9Y2X8 147 aa9.98□□□□□ -0.81
ITGB4-207ENST00000580542 TRAV23DV6A0A075B6W5 121 aa9.97□□□□□ -0.81
ITGB4-207ENST00000580542 TRBV6-5A0A0K0K1A5 114 aa9.97□□□□□ -0.81
ITGB4-207ENST00000580542 MRPS36P82909 103 aaKnown RBP9.97□□□□□ -0.81
ITGB4-207ENST00000580542 UNQ9165/PRO28630Q6UXU0 137 aa9.97□□□□□ -0.81
ITGB4-207ENST00000580542 LINC00308Q8TCZ7 52 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms