RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 LINC00694P0DN24 101 aa6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 PCP4P48539 62 aa6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 MIAQ16674 131 aa6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 LINC00482Q8N8I6 264 aa6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 TMEM243Q9BU79 118 aa6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 GTSF1LQ9H1H1 148 aa6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 CDKN2A-AS1Q9UH64 79 aa6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 POLQO75417 2590 aa6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 UTP20O75691 2785 aaKnown RBP6.65□□□□□ -1.35
CDK5RAP3-208ENST00000578525 PTPN13Q12923 2485 aa6.65□□□□□ -1.35
CDK5RAP3-208ENST00000578525 IGLV5-39A0A0G2JS06 123 aa6.64□□□□□ -1.35
CDK5RAP3-208ENST00000578525 H7C423 109 aa6.64□□□□□ -1.35
CDK5RAP3-208ENST00000578525 J3QR89 54 aa6.64□□□□□ -1.35
CDK5RAP3-208ENST00000578525 NDUFA1O15239 70 aa6.64□□□□□ -1.35
CDK5RAP3-208ENST00000578525 LINC00242Q5T6M2 205 aa6.64□□□□□ -1.35
CDK5RAP3-208ENST00000578525 ATP6V0E2Q8NHE4 81 aa6.64□□□□□ -1.35
CDK5RAP3-208ENST00000578525 SMR3AQ99954 134 aa6.64□□□□□ -1.35
CDK5RAP3-208ENST00000578525 ERG28Q9UKR5 140 aa6.64□□□□□ -1.35
CDK5RAP3-208ENST00000578525 USP9YO00507 2555 aaPredicted RBP6.64□□□□□ -1.35
CDK5RAP3-208ENST00000578525 TRGV4A0A0C4DH28 118 aa6.63□□□□□ -1.35
CDK5RAP3-208ENST00000578525 A8MZ25 164 aa6.63□□□□□ -1.35
CDK5RAP3-208ENST00000578525 UBE2L6O14933 153 aa6.63□□□□□ -1.35
CDK5RAP3-208ENST00000578525 TCL1BO95988 128 aa6.63□□□□□ -1.35
CDK5RAP3-208ENST00000578525 IFITM1P13164 125 aa6.63□□□□□ -1.35
CDK5RAP3-208ENST00000578525 COX6A2Q02221 97 aa6.63□□□□□ -1.35
CDK5RAP3-208ENST00000578525 SFTA2Q6UW10 78 aa6.63□□□□□ -1.35
CDK5RAP3-208ENST00000578525 SORL1Q92673 2214 aa6.63□□□□□ -1.35
CDK5RAP3-208ENST00000578525 TMEM101Q96IK0 257 aa6.63□□□□□ -1.35
CDK5RAP3-208ENST00000578525 CELSR1Q9NYQ6 3014 aa6.63□□□□□ -1.35
CDK5RAP3-208ENST00000578525 CREBBPQ92793 2442 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 LOC100131303A0A0U1RQF7 123 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 SCGB1C2P0DMR2 95 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 SMCPP49901 116 aaPredicted RBP6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 FHL2Q14192 279 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 ETDBQ3ZM63 59 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 ADAMTSL4-AS1Q5T5F5 129 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 SH2D6Q7Z4S9 175 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 MTURNQ8N3F0 131 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 RNF183Q96D59 192 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 CDC42SE2Q9NRR3 84 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 ZFYVE26Q68DK2 2539 aa6.62□□□□□ -1.35
CDK5RAP3-208ENST00000578525 SMIM1B2RUZ4 78 aa6.61□□□□□ -1.35
CDK5RAP3-208ENST00000578525 LINC00612Q8N6U2 182 aa6.61□□□□□ -1.35
CDK5RAP3-208ENST00000578525 LRRK2Q5S007 2527 aa6.61□□□□□ -1.35
CDK5RAP3-208ENST00000578525 TRAV13-1A0A0B4J241 112 aa6.6□□□□□ -1.35
CDK5RAP3-208ENST00000578525 TRBV30A0A0K0K1B3 111 aa6.6□□□□□ -1.35
CDK5RAP3-208ENST00000578525 H7C2G1 150 aa6.6□□□□□ -1.35
CDK5RAP3-208ENST00000578525 PRSS2P07478 247 aa6.6□□□□□ -1.35
CDK5RAP3-208ENST00000578525 INSL3P51460 131 aa6.6□□□□□ -1.35
CDK5RAP3-208ENST00000578525 CIRBPQ14011 172 aaKnown RBP6.6□□□□□ -1.35
CDK5RAP3-208ENST00000578525 C21orf62-AS1Q17RA5 79 aa6.6□□□□□ -1.35
CDK5RAP3-208ENST00000578525 Q1RN00 199 aa6.6□□□□□ -1.35
CDK5RAP3-208ENST00000578525 C9orf66Q5T8R8 295 aa6.6□□□□□ -1.35
CDK5RAP3-208ENST00000578525 KIR2DL5BQ8NHK3 375 aa6.6□□□□□ -1.35
CDK5RAP3-208ENST00000578525 SMIM9A6NGZ8 99 aa6.59□□□□□ -1.35
CDK5RAP3-208ENST00000578525 F5H768 121 aa6.59□□□□□ -1.35
CDK5RAP3-208ENST00000578525 M0QXV9 152 aa6.59□□□□□ -1.35
CDK5RAP3-208ENST00000578525 CRLF1O75462 422 aa6.59□□□□□ -1.35
CDK5RAP3-208ENST00000578525 Q9H8V8 135 aa6.59□□□□□ -1.35
CDK5RAP3-208ENST00000578525 ZFHX3Q15911 3703 aa6.59□□□□□ -1.36
CDK5RAP3-208ENST00000578525 CELSR2Q9HCU4 2923 aa6.58□□□□□ -1.36
CDK5RAP3-208ENST00000578525 TRBV6-8A0A0A6YYG3 113 aa6.58□□□□□ -1.36
CDK5RAP3-208ENST00000578525 NPC2P61916 151 aa6.58□□□□□ -1.36
CDK5RAP3-208ENST00000578525 HERV-K104P63124 156 aa6.58□□□□□ -1.36
CDK5RAP3-208ENST00000578525 GAGE6Q13070 117 aa6.58□□□□□ -1.36
CDK5RAP3-208ENST00000578525 ATXN8Q156A1 80 aa6.58□□□□□ -1.36
CDK5RAP3-208ENST00000578525 X6R8D5 127 aa6.58□□□□□ -1.36
CDK5RAP3-208ENST00000578525 ITPR3Q14573 2671 aa6.58□□□□□ -1.36
CDK5RAP3-208ENST00000578525 ANK3Q12955 4377 aaKnown RBP6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 TRIAP1O43715 76 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 FOXI1Q12951 378 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 TEN1Q86WV5 123 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 LINC00308Q8TCZ7 52 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 PPDPFLQ8WWR9 84 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 COPS9Q8WXC6 57 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 ZNF625Q96I27 306 aaPredicted RBP6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 SPATA25Q9BR10 227 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 PPDPFQ9H3Y8 114 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 ICOSQ9Y6W8 199 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 SVEP1Q4LDE5 3571 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 ABCA12Q86UK0 2595 aa6.57□□□□□ -1.36
CDK5RAP3-208ENST00000578525 VPS13CQ709C8 3753 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 ZANQ9Y493 2812 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 INAFM1C9JVW0 142 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 SLC25A20O43772 301 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 DEFB130BP0DP73 79 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 DEFB130AP0DP74 79 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 RPL13AP40429 203 aaKnown RBP6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 LINC01620Q4KN68 170 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 MEIG1Q5JSS6 88 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 PRIMA1Q86XR5 153 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 CHCHD5Q9BSY4 110 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 APCP25054 2843 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 CRYBG3Q68DQ2 2970 aa6.56□□□□□ -1.36
CDK5RAP3-208ENST00000578525 TEX15Q9BXT5 2789 aa6.55□□□□□ -1.36
CDK5RAP3-208ENST00000578525 GAGE12HA6NDE8 117 aa6.55□□□□□ -1.36
CDK5RAP3-208ENST00000578525 LYRM9A8MSI8 78 aa6.55□□□□□ -1.36
CDK5RAP3-208ENST00000578525 C9JAW5 83 aa6.55□□□□□ -1.36
CDK5RAP3-208ENST00000578525 COX6CP09669 75 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms