RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 A0A1W2PPM0 123 aa6.25□□□□□ -1.41
LINC01541-201ENST00000566582 FABP2P12104 132 aa6.25□□□□□ -1.41
LINC01541-201ENST00000566582 MRPS36P82909 103 aaKnown RBP6.25□□□□□ -1.41
LINC01541-201ENST00000566582 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.25□□□□□ -1.41
LINC01541-201ENST00000566582 SPATA3Q8NHX4 192 aa6.25□□□□□ -1.41
LINC01541-201ENST00000566582 TIMM21Q9BVV7 248 aa6.25□□□□□ -1.41
LINC01541-201ENST00000566582 GEMIN7Q9H840 131 aaKnown RBP6.25□□□□□ -1.41
LINC01541-201ENST00000566582 DEFB130BP0DP73 79 aa6.25□□□□□ -1.41
LINC01541-201ENST00000566582 DEFB130AP0DP74 79 aa6.25□□□□□ -1.41
LINC01541-201ENST00000566582 C12orf74Q32Q52 190 aa6.25□□□□□ -1.41
LINC01541-201ENST00000566582 FAM104AQ969W3 186 aa6.25□□□□□ -1.41
LINC01541-201ENST00000566582 OVOL2Q9BRP0 275 aa6.25□□□□□ -1.41
LINC01541-201ENST00000566582 A0A0J9YY99 117 aa6.24□□□□□ -1.41
LINC01541-201ENST00000566582 SPCS1Q9Y6A9 102 aa6.24□□□□□ -1.41
LINC01541-201ENST00000566582 TINCRA0A1B0GVN0 87 aa6.24□□□□□ -1.41
LINC01541-201ENST00000566582 UBE2L6O14933 153 aa6.24□□□□□ -1.41
LINC01541-201ENST00000566582 UBE2D3P61077 147 aa6.24□□□□□ -1.41
LINC01541-201ENST00000566582 UBE2D2P62837 147 aa6.24□□□□□ -1.41
LINC01541-201ENST00000566582 TRAV8-3A0A0A6YYJ7 113 aa6.23□□□□□ -1.41
LINC01541-201ENST00000566582 LOC100131303A0A0U1RQF7 123 aa6.23□□□□□ -1.41
LINC01541-201ENST00000566582 TRBV6-4A0A1B0GX49 114 aa6.23□□□□□ -1.41
LINC01541-201ENST00000566582 LINC00694P0DN24 101 aa6.23□□□□□ -1.41
LINC01541-201ENST00000566582 IGHV3-30-3P0DP02 117 aa6.23□□□□□ -1.41
LINC01541-201ENST00000566582 NTM-AS1Q6ZSK4 140 aa6.23□□□□□ -1.41
LINC01541-201ENST00000566582 CBY1Q9Y3M2 126 aa6.23□□□□□ -1.41
LINC01541-201ENST00000566582 K7EP34 96 aa6.23□□□□□ -1.41
LINC01541-201ENST00000566582 IGLL5B9A064 214 aa6.22□□□□□ -1.41
LINC01541-201ENST00000566582 APOMO95445 188 aa6.22□□□□□ -1.41
LINC01541-201ENST00000566582 SPINK8P0C7L1 97 aa6.22□□□□□ -1.41
LINC01541-201ENST00000566582 SMAGPQ0VAQ4 97 aa6.22□□□□□ -1.41
LINC01541-201ENST00000566582 CITED1Q99966 193 aa6.22□□□□□ -1.41
LINC01541-201ENST00000566582 VWFP04275 2813 aa6.22□□□□□ -1.41
LINC01541-201ENST00000566582 TENM1Q9UKZ4 2725 aa6.22□□□□□ -1.41
LINC01541-201ENST00000566582 ATRQ13535 2644 aa6.22□□□□□ -1.41
LINC01541-201ENST00000566582 UBE2D1P51668 147 aa6.21□□□□□ -1.41
LINC01541-201ENST00000566582 OR5A1Q8NGJ0 315 aa6.21□□□□□ -1.41
LINC01541-201ENST00000566582 TMEM101Q96IK0 257 aa6.21□□□□□ -1.41
LINC01541-201ENST00000566582 TMEM243Q9BU79 118 aa6.21□□□□□ -1.41
LINC01541-201ENST00000566582 TRAV13-1A0A0B4J241 112 aa6.21□□□□□ -1.42
LINC01541-201ENST00000566582 IGHV1-58A0A0C4DH39 117 aa6.21□□□□□ -1.42
LINC01541-201ENST00000566582 FHL2Q14192 279 aa6.21□□□□□ -1.42
LINC01541-201ENST00000566582 SPANXB1Q9NS25 103 aaPredicted RBP6.21□□□□□ -1.42
LINC01541-201ENST00000566582 CDKN2A-AS1Q9UH64 79 aa6.21□□□□□ -1.42
LINC01541-201ENST00000566582 DEFB135Q30KP9 77 aa6.2□□□□□ -1.42
LINC01541-201ENST00000566582 GTSF1LQ9H1H1 148 aa6.2□□□□□ -1.42
LINC01541-201ENST00000566582 A8MZ25 164 aa6.2□□□□□ -1.42
LINC01541-201ENST00000566582 TMEM238C9JI98 176 aa6.2□□□□□ -1.42
LINC01541-201ENST00000566582 IGHV3-30P01768 117 aa6.2□□□□□ -1.42
LINC01541-201ENST00000566582 IGHV3-30-5P0DP03 117 aa6.2□□□□□ -1.42
LINC01541-201ENST00000566582 HERVK_113P63121 156 aa6.2□□□□□ -1.42
LINC01541-201ENST00000566582 KIR2DL5BQ8NHK3 375 aa6.2□□□□□ -1.42
LINC01541-201ENST00000566582 VSIG2Q96IQ7 327 aa6.2□□□□□ -1.42
LINC01541-201ENST00000566582 PGPEP1Q9NXJ5 209 aa6.2□□□□□ -1.42
LINC01541-201ENST00000566582 NDUFA12Q9UI09 145 aa6.2□□□□□ -1.42
LINC01541-201ENST00000566582 TEP1Q99973 2627 aaKnown RBP6.2□□□□□ -1.42
LINC01541-201ENST00000566582 A0A1B0GWB2 263 aa6.19□□□□□ -1.42
LINC01541-201ENST00000566582 SMIM9A6NGZ8 99 aa6.19□□□□□ -1.42
LINC01541-201ENST00000566582 APOC4P55056 127 aa6.19□□□□□ -1.42
LINC01541-201ENST00000566582 C10orf126Q8N4M7 172 aa6.19□□□□□ -1.42
LINC01541-201ENST00000566582 CSDC2Q9Y534 153 aaKnown RBP6.19□□□□□ -1.42
LINC01541-201ENST00000566582 X6R8D5 127 aa6.19□□□□□ -1.42
LINC01541-201ENST00000566582 A0A0J9YXY3 114 aa6.19□□□□□ -1.42
LINC01541-201ENST00000566582 TIRAPP58753 221 aa6.19□□□□□ -1.42
LINC01541-201ENST00000566582 IGKV3OR2-268A0A0C4DH90 116 aa6.18□□□□□ -1.42
LINC01541-201ENST00000566582 DEFB4AO15263 64 aa6.18□□□□□ -1.42
LINC01541-201ENST00000566582 PRSS2P07478 247 aa6.18□□□□□ -1.42
LINC01541-201ENST00000566582 COX6A2Q02221 97 aa6.18□□□□□ -1.42
LINC01541-201ENST00000566582 GAGE6Q13070 117 aa6.18□□□□□ -1.42
LINC01541-201ENST00000566582 LINC00242Q5T6M2 205 aa6.18□□□□□ -1.42
LINC01541-201ENST00000566582 FAM222AQ5U5X8 452 aa6.18□□□□□ -1.42
LINC01541-201ENST00000566582 SBSPONQ8IVN8 264 aa6.18□□□□□ -1.42
LINC01541-201ENST00000566582 CHCHD5Q9BSY4 110 aa6.18□□□□□ -1.42
LINC01541-201ENST00000566582 CDC42SE2Q9NRR3 84 aa6.18□□□□□ -1.42
LINC01541-201ENST00000566582 NBEAL2Q6ZNJ1 2754 aa6.18□□□□□ -1.42
LINC01541-201ENST00000566582 TRBV6-8A0A0A6YYG3 113 aa6.18□□□□□ -1.42
LINC01541-201ENST00000566582 LOC107984156A0A0G2JMH3 177 aa6.18□□□□□ -1.42
LINC01541-201ENST00000566582 RPL24P83731 157 aaKnown RBP6.18□□□□□ -1.42
LINC01541-201ENST00000566582 SFTA2Q6UW10 78 aa6.18□□□□□ -1.42
LINC01541-201ENST00000566582 ARL17AQ8IVW1 177 aa6.18□□□□□ -1.42
LINC01541-201ENST00000566582 FLNBO75369 2602 aaKnown RBP6.17□□□□□ -1.42
LINC01541-201ENST00000566582 GYPEP15421 78 aa6.17□□□□□ -1.42
LINC01541-201ENST00000566582 MUSTN1Q8IVN3 82 aa6.17□□□□□ -1.42
LINC01541-201ENST00000566582 F8P00451 2351 aa6.17□□□□□ -1.42
LINC01541-201ENST00000566582 CFC1BP0CG36 223 aa6.17□□□□□ -1.42
LINC01541-201ENST00000566582 CFC1P0CG37 223 aa6.17□□□□□ -1.42
LINC01541-201ENST00000566582 IGLV5-45A0A087WSX0 123 aa6.16□□□□□ -1.42
LINC01541-201ENST00000566582 H3BMG7 143 aa6.16□□□□□ -1.42
LINC01541-201ENST00000566582 H7C423 109 aa6.16□□□□□ -1.42
LINC01541-201ENST00000566582 ZFAND6Q6FIF0 208 aa6.16□□□□□ -1.42
LINC01541-201ENST00000566582 ATP6V0E2Q8NHE4 81 aa6.16□□□□□ -1.42
LINC01541-201ENST00000566582 A0A096LPF7 62 aa6.16□□□□□ -1.42
LINC01541-201ENST00000566582 LYRM9A8MSI8 78 aa6.16□□□□□ -1.42
LINC01541-201ENST00000566582 TSPAN13O95857 204 aa6.16□□□□□ -1.42
LINC01541-201ENST00000566582 PCP4P48539 62 aa6.16□□□□□ -1.42
LINC01541-201ENST00000566582 NPC2P61916 151 aa6.16□□□□□ -1.42
LINC01541-201ENST00000566582 PRO1854Q9UHT4 67 aa6.16□□□□□ -1.42
LINC01541-201ENST00000566582 PRO0255Q9UI72 69 aa6.16□□□□□ -1.42
LINC01541-201ENST00000566582 IGHV4-28A0A0C4DH34 117 aa6.15□□□□□ -1.42
LINC01541-201ENST00000566582 TMEM262E9PQX1 116 aa6.15□□□□□ -1.42
LINC01541-201ENST00000566582 DAD1P61803 113 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms