RNA–Protein interactions for RNA: ENST00000565334.5

CDH5-205, Transcript of cadherin 5, humanhuman

TSL 5

Gene CDH5, Length 2,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-205ENST00000565334 PTPN13Q12923 2485 aa13.39□□□□□ -0.27
CDH5-205ENST00000565334 IGHV3OR16-12A0A075B7B8 117 aa13.39□□□□□ -0.27
CDH5-205ENST00000565334 TRGV1A0A0A0MS02 117 aa13.39□□□□□ -0.27
CDH5-205ENST00000565334 TRAV4A0A0B4J268 109 aa13.39□□□□□ -0.27
CDH5-205ENST00000565334 CRYBG3Q68DQ2 2970 aa13.38□□□□□ -0.27
CDH5-205ENST00000565334 POLQO75417 2590 aa13.38□□□□□ -0.27
CDH5-205ENST00000565334 LRRK2Q5S007 2527 aa13.38□□□□□ -0.27
CDH5-205ENST00000565334 IGHV1-58A0A0C4DH39 117 aa13.37□□□□□ -0.27
CDH5-205ENST00000565334 Q9UF83 564 aa13.37□□□□□ -0.27
CDH5-205ENST00000565334 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.37□□□□□ -0.27
CDH5-205ENST00000565334 IGKV2-29A2NJV5 120 aaPredicted RBP13.37□□□□□ -0.27
CDH5-205ENST00000565334 SLC25A20O43772 301 aa13.37□□□□□ -0.27
CDH5-205ENST00000565334 IGHV3-30-3P0DP02 117 aa13.37□□□□□ -0.27
CDH5-205ENST00000565334 RPL36AP83881 106 aaKnown RBP13.37□□□□□ -0.27
CDH5-205ENST00000565334 DAZ2Q13117 558 aaKnown RBP13.37□□□□□ -0.27
CDH5-205ENST00000565334 RPL36ALQ969Q0 106 aaKnown RBP13.37□□□□□ -0.27
CDH5-205ENST00000565334 CREBBPQ92793 2442 aa13.37□□□□□ -0.27
CDH5-205ENST00000565334 CEMP1Q6PRD7 247 aaPredicted RBP13.36□□□□□ -0.27
CDH5-205ENST00000565334 C16orf74Q96GX8 76 aa13.36□□□□□ -0.27
CDH5-205ENST00000565334 SPANXDQ9BXN6 97 aa13.36□□□□□ -0.27
CDH5-205ENST00000565334 K7EQD1 137 aa13.36□□□□□ -0.27
CDH5-205ENST00000565334 RPL13AP40429 203 aaKnown RBP13.36□□□□□ -0.27
CDH5-205ENST00000565334 TMEM126AQ9H061 195 aa13.36□□□□□ -0.27
CDH5-205ENST00000565334 PRO1854Q9UHT4 67 aa13.36□□□□□ -0.27
CDH5-205ENST00000565334 TIRAPP58753 221 aa13.35□□□□□ -0.27
CDH5-205ENST00000565334 DAZ4Q86SG3 579 aaKnown RBP13.35□□□□□ -0.27
CDH5-205ENST00000565334 DAZ3Q9NR90 486 aaKnown RBP13.35□□□□□ -0.27
CDH5-205ENST00000565334 ZFYVE26Q68DK2 2539 aa13.35□□□□□ -0.27
CDH5-205ENST00000565334 IGHV3-38A0A0C4DH36 116 aa13.34□□□□□ -0.27
CDH5-205ENST00000565334 CFC1BP0CG36 223 aa13.34□□□□□ -0.27
CDH5-205ENST00000565334 CFC1P0CG37 223 aa13.34□□□□□ -0.27
CDH5-205ENST00000565334 IGHV3-64A0A075B6Q5 118 aa13.34□□□□□ -0.27
CDH5-205ENST00000565334 SMIM20Q8N5G0 67 aa13.34□□□□□ -0.27
CDH5-205ENST00000565334 A0A0J9YXY3 114 aa13.33□□□□□ -0.28
CDH5-205ENST00000565334 DGAT2L7PQ6IED9 249 aa13.33□□□□□ -0.28
CDH5-205ENST00000565334 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.33□□□□□ -0.28
CDH5-205ENST00000565334 ADARB2-AS1A8MUL3 147 aa13.33□□□□□ -0.28
CDH5-205ENST00000565334 VSIG2Q96IQ7 327 aa13.33□□□□□ -0.28
CDH5-205ENST00000565334 C19orf73Q9NVV2 129 aa13.33□□□□□ -0.28
CDH5-205ENST00000565334 CSDC2Q9Y534 153 aaKnown RBP13.33□□□□□ -0.28
CDH5-205ENST00000565334 IGLV5-45A0A087WSX0 123 aa13.32□□□□□ -0.28
CDH5-205ENST00000565334 A0A0B4J2C4 111 aa13.32□□□□□ -0.28
CDH5-205ENST00000565334 CCDC179H3BU77 68 aa13.32□□□□□ -0.28
CDH5-205ENST00000565334 Q6ZTI0 123 aa13.32□□□□□ -0.28
CDH5-205ENST00000565334 GIG44P09565 113 aaPredicted RBP13.31□□□□□ -0.28
CDH5-205ENST00000565334 NACAE9PAV3 2078 aa13.31□□□□□ -0.28
CDH5-205ENST00000565334 RNASE13Q5GAN3 156 aaKnown RBP13.31□□□□□ -0.28
CDH5-205ENST00000565334 FAM19A3Q7Z5A8 133 aa13.31□□□□□ -0.28
CDH5-205ENST00000565334 ZANQ9Y493 2812 aa13.3□□□□□ -0.28
CDH5-205ENST00000565334 A4D1N5 150 aa13.3□□□□□ -0.28
CDH5-205ENST00000565334 OVOL2Q9BRP0 275 aa13.3□□□□□ -0.28
CDH5-205ENST00000565334 SPANXCQ9NY87 97 aa13.3□□□□□ -0.28
CDH5-205ENST00000565334 NDUFA12Q9UI09 145 aa13.3□□□□□ -0.28
CDH5-205ENST00000565334 MUSTN1Q8IVN3 82 aa13.29□□□□□ -0.28
CDH5-205ENST00000565334 NOP10Q9NPE3 64 aaKnown RBP13.29□□□□□ -0.28
CDH5-205ENST00000565334 TRAV8-3A0A0A6YYJ7 113 aa13.28□□□□□ -0.28
CDH5-205ENST00000565334 TRAV8-4A0A0B4J246 113 aa13.28□□□□□ -0.28
CDH5-205ENST00000565334 FAM240AA0A1B0GVK7 77 aa13.28□□□□□ -0.28
CDH5-205ENST00000565334 C9JAW5 83 aa13.28□□□□□ -0.28
CDH5-205ENST00000565334 HERVK_113P63121 156 aa13.28□□□□□ -0.28
CDH5-205ENST00000565334 ATXN8Q156A1 80 aa13.28□□□□□ -0.28
CDH5-205ENST00000565334 SORL1Q92673 2214 aa13.28□□□□□ -0.28
CDH5-205ENST00000565334 TIMM17BO60830 172 aa13.28□□□□□ -0.28
CDH5-205ENST00000565334 PLAC8L1A1L4L8 177 aa13.27□□□□□ -0.28
CDH5-205ENST00000565334 CSNK1G2-AS1Q8NCQ2 148 aa13.27□□□□□ -0.28
CDH5-205ENST00000565334 LITAFQ99732 161 aa13.27□□□□□ -0.28
CDH5-205ENST00000565334 MXRA5Q9NR99 2828 aa13.27□□□□□ -0.29
CDH5-205ENST00000565334 TRBV6-4A0A1B0GX49 114 aa13.26□□□□□ -0.29
CDH5-205ENST00000565334 RPL35AP18077 110 aaKnown RBP13.26□□□□□ -0.29
CDH5-205ENST00000565334 H7C423 109 aa13.25□□□□□ -0.29
CDH5-205ENST00000565334 SFTA2Q6UW10 78 aa13.25□□□□□ -0.29
CDH5-205ENST00000565334 TEX15Q9BXT5 2789 aa13.25□□□□□ -0.29
CDH5-205ENST00000565334 IGHV3-33P01772 117 aa13.25□□□□□ -0.29
CDH5-205ENST00000565334 MAP1AP78559 2803 aaPredicted RBP13.24□□□□□ -0.29
CDH5-205ENST00000565334 ABCA12Q86UK0 2595 aa13.24□□□□□ -0.29
CDH5-205ENST00000565334 TRGV2A0A075B6R0 118 aa13.24□□□□□ -0.29
CDH5-205ENST00000565334 TRBV10-2A0A0K0K1G8 114 aa13.24□□□□□ -0.29
CDH5-205ENST00000565334 WFDC10AQ9H1F0 79 aa13.24□□□□□ -0.29
CDH5-205ENST00000565334 CDKN2A-AS1Q9UH64 79 aa13.24□□□□□ -0.29
CDH5-205ENST00000565334 APCP25054 2843 aa13.24□□□□□ -0.29
CDH5-205ENST00000565334 CRLF1O75462 422 aa13.24□□□□□ -0.29
CDH5-205ENST00000565334 MIAQ16674 131 aa13.24□□□□□ -0.29
CDH5-205ENST00000565334 LINC01620Q4KN68 170 aa13.24□□□□□ -0.29
CDH5-205ENST00000565334 NTM-AS1Q6ZSK4 140 aa13.24□□□□□ -0.29
CDH5-205ENST00000565334 C15orf53Q8NAA6 179 aa13.24□□□□□ -0.29
CDH5-205ENST00000565334 NDUFA1O15239 70 aa13.23□□□□□ -0.29
CDH5-205ENST00000565334 MEIG1Q5JSS6 88 aa13.23□□□□□ -0.29
CDH5-205ENST00000565334 NTN5Q8WTR8 489 aaPredicted RBP13.23□□□□□ -0.29
CDH5-205ENST00000565334 IGLV5-39A0A0G2JS06 123 aa13.22□□□□□ -0.29
CDH5-205ENST00000565334 TRBV7-7A0A0K0K1E9 115 aa13.22□□□□□ -0.29
CDH5-205ENST00000565334 PF4P02776 101 aa13.22□□□□□ -0.29
CDH5-205ENST00000565334 LINC00694P0DN24 101 aa13.22□□□□□ -0.29
CDH5-205ENST00000565334 LINC00242Q5T6M2 205 aa13.22□□□□□ -0.29
CDH5-205ENST00000565334 UBE2WQ96B02 151 aa13.22□□□□□ -0.29
CDH5-205ENST00000565334 TMEM243Q9BU79 118 aa13.22□□□□□ -0.29
CDH5-205ENST00000565334 TRBV30A0A0K0K1B3 111 aa13.21□□□□□ -0.29
CDH5-205ENST00000565334 H3BT86 120 aa13.21□□□□□ -0.29
CDH5-205ENST00000565334 TMEM101Q96IK0 257 aa13.21□□□□□ -0.29
CDH5-205ENST00000565334 IMUPQ9GZP8 106 aa13.21□□□□□ -0.29
CDH5-205ENST00000565334 CDC42SE2Q9NRR3 84 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms