RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 HERVK_113P61574 105 aa17.71■□□□□ 0.43
LINC01003-201ENST00000564834 SMAGPQ0VAQ4 97 aa17.71■□□□□ 0.43
LINC01003-201ENST00000564834 DGAT2L7PQ6IED9 249 aa17.71■□□□□ 0.43
LINC01003-201ENST00000564834 TMEM243Q9BU79 118 aa17.71■□□□□ 0.43
LINC01003-201ENST00000564834 TRBV25-1A0A075B6N4 114 aa17.71■□□□□ 0.43
LINC01003-201ENST00000564834 TMEM170BQ5T4T1 132 aa17.71■□□□□ 0.43
LINC01003-201ENST00000564834 TRAV8-6A0A0B4J262 113 aa17.7■□□□□ 0.42
LINC01003-201ENST00000564834 GYPEP15421 78 aa17.7■□□□□ 0.42
LINC01003-201ENST00000564834 RNASE13Q5GAN3 156 aaKnown RBP17.7■□□□□ 0.42
LINC01003-201ENST00000564834 MPV17L2Q567V2 206 aa17.69■□□□□ 0.42
LINC01003-201ENST00000564834 A0A0J9YXV3 536 aa17.68■□□□□ 0.42
LINC01003-201ENST00000564834 TEX48A0A1B0GUV7 120 aa17.68■□□□□ 0.42
LINC01003-201ENST00000564834 H7C423 109 aa17.68■□□□□ 0.42
LINC01003-201ENST00000564834 ATP5G1P05496 136 aa17.68■□□□□ 0.42
LINC01003-201ENST00000564834 TRBV6-8A0A0A6YYG3 113 aa17.67■□□□□ 0.42
LINC01003-201ENST00000564834 UBE2L6O14933 153 aa17.67■□□□□ 0.42
LINC01003-201ENST00000564834 PAX4O43316 350 aa17.66■□□□□ 0.42
LINC01003-201ENST00000564834 ZNF22P17026 224 aaPredicted RBP17.66■□□□□ 0.42
LINC01003-201ENST00000564834 HIGD1BQ9P298 99 aa17.66■□□□□ 0.42
LINC01003-201ENST00000564834 NOTCH1P46531 2555 aa17.66■□□□□ 0.42
LINC01003-201ENST00000564834 ATP6V0E2Q8NHE4 81 aa17.66■□□□□ 0.42
LINC01003-201ENST00000564834 MDFIQ99750 246 aa17.66■□□□□ 0.42
LINC01003-201ENST00000564834 COL5A1-AS1Q5SY13 56 aa17.65■□□□□ 0.42
LINC01003-201ENST00000564834 MAPKAPK5-AS1Q8N8E1 139 aa17.65■□□□□ 0.42
LINC01003-201ENST00000564834 BVES-AS1Q5T3Y7 98 aa17.64■□□□□ 0.41
LINC01003-201ENST00000564834 RETNQ9HD89 108 aa17.64■□□□□ 0.41
LINC01003-201ENST00000564834 TINCRA0A1B0GVN0 87 aa17.63■□□□□ 0.41
LINC01003-201ENST00000564834 AMMECR1LQ6DCA0 310 aa17.63■□□□□ 0.41
LINC01003-201ENST00000564834 OR5A1Q8NGJ0 315 aa17.63■□□□□ 0.41
LINC01003-201ENST00000564834 MYMXA0A1B0GTQ4 84 aa17.63■□□□□ 0.41
LINC01003-201ENST00000564834 TMEM223A0PJW6 202 aa17.63■□□□□ 0.41
LINC01003-201ENST00000564834 UBE2D1P51668 147 aa17.63■□□□□ 0.41
LINC01003-201ENST00000564834 HSD52Q0P140 79 aa17.62■□□□□ 0.41
LINC01003-201ENST00000564834 VSIG2Q96IQ7 327 aa17.62■□□□□ 0.41
LINC01003-201ENST00000564834 ZNF25P17030 456 aaPredicted RBP17.61■□□□□ 0.41
LINC01003-201ENST00000564834 TMEM101Q96IK0 257 aa17.61■□□□□ 0.41
LINC01003-201ENST00000564834 CDC42SE2Q9NRR3 84 aa17.61■□□□□ 0.41
LINC01003-201ENST00000564834 C11orf68Q9H3H3 251 aaKnown RBP17.59■□□□□ 0.41
LINC01003-201ENST00000564834 NBEAL1Q6ZS30 2694 aa17.59■□□□□ 0.41
LINC01003-201ENST00000564834 A0A0J9YY99 117 aa17.58■□□□□ 0.41
LINC01003-201ENST00000564834 A0A1B0GV90 55 aa17.58■□□□□ 0.41
LINC01003-201ENST00000564834 F5H768 121 aa17.58■□□□□ 0.41
LINC01003-201ENST00000564834 ZNF815PA8K554 130 aa17.58■□□□□ 0.4
LINC01003-201ENST00000564834 CHCHD5Q9BSY4 110 aa17.58■□□□□ 0.4
LINC01003-201ENST00000564834 TRAV26-1A0A087WT03 109 aa17.57■□□□□ 0.4
LINC01003-201ENST00000564834 TIRAPP58753 221 aa17.57■□□□□ 0.4
LINC01003-201ENST00000564834 GAGE6Q13070 117 aa17.57■□□□□ 0.4
LINC01003-201ENST00000564834 FAM19A3Q7Z5A8 133 aa17.57■□□□□ 0.4
LINC01003-201ENST00000564834 GEMIN7Q9H840 131 aaKnown RBP17.57■□□□□ 0.4
LINC01003-201ENST00000564834 LEPROTO15243 131 aa17.56■□□□□ 0.4
LINC01003-201ENST00000564834 J3QQQ9 107 aa17.56■□□□□ 0.4
LINC01003-201ENST00000564834 TSPEAR-AS2P59090 65 aa17.56■□□□□ 0.4
LINC01003-201ENST00000564834 SEC11AP67812 179 aa17.56■□□□□ 0.4
LINC01003-201ENST00000564834 IGLV5-45A0A087WSX0 123 aa17.55■□□□□ 0.4
LINC01003-201ENST00000564834 C12orf74Q32Q52 190 aa17.55■□□□□ 0.4
LINC01003-201ENST00000564834 HTN3P15516 51 aa17.54■□□□□ 0.4
LINC01003-201ENST00000564834 LINC00469Q8N7U9 141 aa17.54■□□□□ 0.4
LINC01003-201ENST00000564834 LGALS3P17931 250 aaKnown RBP17.53■□□□□ 0.4
LINC01003-201ENST00000564834 HERVK_113P63121 156 aa17.53■□□□□ 0.4
LINC01003-201ENST00000564834 PLEKHB2Q96CS7 222 aa17.53■□□□□ 0.4
LINC01003-201ENST00000564834 A0A096LPF7 62 aa17.53■□□□□ 0.4
LINC01003-201ENST00000564834 LINC00242Q5T6M2 205 aa17.53■□□□□ 0.4
LINC01003-201ENST00000564834 MGAM2Q2M2H8 2515 aa17.52■□□□□ 0.4
LINC01003-201ENST00000564834 KPRPQ5T749 579 aaPredicted RBP17.52■□□□□ 0.4
LINC01003-201ENST00000564834 ORAOV1Q8WV07 137 aa17.52■□□□□ 0.4
LINC01003-201ENST00000564834 TRAV13-1A0A0B4J241 112 aa17.51■□□□□ 0.39
LINC01003-201ENST00000564834 MRPL23Q16540 153 aaKnown RBP17.51■□□□□ 0.39
LINC01003-201ENST00000564834 IGHV3-64A0A075B6Q5 118 aa17.51■□□□□ 0.39
LINC01003-201ENST00000564834 TAL2Q16559 108 aa17.51■□□□□ 0.39
LINC01003-201ENST00000564834 IGLV4-60A0A075B6I1 120 aa17.5■□□□□ 0.39
LINC01003-201ENST00000564834 IGHV1-58A0A0C4DH39 117 aa17.5■□□□□ 0.39
LINC01003-201ENST00000564834 H3BRM9 83 aa17.5■□□□□ 0.39
LINC01003-201ENST00000564834 PRB2P02812 416 aaPredicted RBP17.5■□□□□ 0.39
LINC01003-201ENST00000564834 IGHV3-30-3P0DP02 117 aa17.5■□□□□ 0.39
LINC01003-201ENST00000564834 SCGB1D4Q6XE38 83 aa17.5■□□□□ 0.39
LINC01003-201ENST00000564834 SH2D6Q7Z4S9 175 aa17.5■□□□□ 0.39
LINC01003-201ENST00000564834 CDKN2A-AS1Q9UH64 79 aa17.5■□□□□ 0.39
LINC01003-201ENST00000564834 ICOSQ9Y6W8 199 aa17.5■□□□□ 0.39
LINC01003-201ENST00000564834 TENM3Q9P273 2699 aa17.5■□□□□ 0.39
LINC01003-201ENST00000564834 K7EIL1 84 aa17.49■□□□□ 0.39
LINC01003-201ENST00000564834 COX6A2Q02221 97 aa17.48■□□□□ 0.39
LINC01003-201ENST00000564834 TRAV8-3A0A0A6YYJ7 113 aa17.48■□□□□ 0.39
LINC01003-201ENST00000564834 A0A1B0GUV1 79 aa17.48■□□□□ 0.39
LINC01003-201ENST00000564834 A0A0J9YWU9 116 aa17.46■□□□□ 0.39
LINC01003-201ENST00000564834 SPINK8P0C7L1 97 aa17.46■□□□□ 0.39
LINC01003-201ENST00000564834 GCSHP23434 173 aa17.46■□□□□ 0.39
LINC01003-201ENST00000564834 CEND1Q8N111 149 aa17.45■□□□□ 0.38
LINC01003-201ENST00000564834 HIST1H4GQ99525 98 aa17.45■□□□□ 0.38
LINC01003-201ENST00000564834 SPATA25Q9BR10 227 aa17.45■□□□□ 0.38
LINC01003-201ENST00000564834 TM2D2Q9BX73 214 aa17.45■□□□□ 0.38
LINC01003-201ENST00000564834 A6NDN8 102 aa17.45■□□□□ 0.38
LINC01003-201ENST00000564834 TMEM262E9PQX1 116 aa17.44■□□□□ 0.38
LINC01003-201ENST00000564834 Q6ZTC4 211 aa17.44■□□□□ 0.38
LINC01003-201ENST00000564834 H3BNG1 76 aa17.43■□□□□ 0.38
LINC01003-201ENST00000564834 FXYD2P54710 66 aa17.43■□□□□ 0.38
LINC01003-201ENST00000564834 RBX1P62877 108 aa17.43■□□□□ 0.38
LINC01003-201ENST00000564834 TM2D3Q9BRN9 247 aa17.43■□□□□ 0.38
LINC01003-201ENST00000564834 DEFB121Q5J5C9 76 aa17.41■□□□□ 0.38
LINC01003-201ENST00000564834 TAX1BP3O14907 124 aa17.4■□□□□ 0.38
LINC01003-201ENST00000564834 IGLV5-39A0A0G2JS06 123 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms