RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.38□□□□□ -0.91
USB1-207ENST00000563149 Q96MF0 132 aa9.38□□□□□ -0.91
USB1-207ENST00000563149 TRAV8-4A0A0B4J246 113 aa9.37□□□□□ -0.91
USB1-207ENST00000563149 HERV-K104P63124 156 aa9.37□□□□□ -0.91
USB1-207ENST00000563149 LINC00308Q8TCZ7 52 aa9.37□□□□□ -0.91
USB1-207ENST00000563149 CITED1Q99966 193 aa9.37□□□□□ -0.91
USB1-207ENST00000563149 NPC2P61916 151 aa9.37□□□□□ -0.91
USB1-207ENST00000563149 MRPL23Q16540 153 aaKnown RBP9.37□□□□□ -0.91
USB1-207ENST00000563149 Q9H8V8 135 aa9.37□□□□□ -0.91
USB1-207ENST00000563149 SMIM1B2RUZ4 78 aa9.36□□□□□ -0.91
USB1-207ENST00000563149 KRTAP10-9P60411 292 aa9.36□□□□□ -0.91
USB1-207ENST00000563149 DEFB121Q5J5C9 76 aa9.36□□□□□ -0.91
USB1-207ENST00000563149 Q6Q795 121 aa9.36□□□□□ -0.91
USB1-207ENST00000563149 SORL1Q92673 2214 aa9.36□□□□□ -0.91
USB1-207ENST00000563149 TEX49A0A1B0GTD5 131 aa9.35□□□□□ -0.91
USB1-207ENST00000563149 CCL24O00175 119 aa9.35□□□□□ -0.91
USB1-207ENST00000563149 SNCGO76070 127 aa9.35□□□□□ -0.91
USB1-207ENST00000563149 NTM-AS1Q6ZSK4 140 aa9.35□□□□□ -0.91
USB1-207ENST00000563149 CITED2Q99967 270 aaPredicted RBP9.35□□□□□ -0.91
USB1-207ENST00000563149 CDC42SE2Q9NRR3 84 aa9.35□□□□□ -0.91
USB1-207ENST00000563149 PIEZO1Q92508 2521 aa9.35□□□□□ -0.91
USB1-207ENST00000563149 CHD8Q9HCK8 2581 aa9.35□□□□□ -0.91
USB1-207ENST00000563149 LINC00694P0DN24 101 aa9.35□□□□□ -0.91
USB1-207ENST00000563149 FAM240AA0A1B0GVK7 77 aa9.34□□□□□ -0.91
USB1-207ENST00000563149 Q6ZTI0 123 aa9.34□□□□□ -0.91
USB1-207ENST00000563149 CLEC2BQ92478 149 aa9.34□□□□□ -0.91
USB1-207ENST00000563149 ZNF625Q96I27 306 aaPredicted RBP9.34□□□□□ -0.91
USB1-207ENST00000563149 FAM110AQ9BQ89 295 aa9.34□□□□□ -0.91
USB1-207ENST00000563149 KRTAP1-3Q8IUG1 177 aa9.33□□□□□ -0.92
USB1-207ENST00000563149 C16orf74Q96GX8 76 aa9.33□□□□□ -0.92
USB1-207ENST00000563149 PKD1L2Q7Z442 2459 aa9.32□□□□□ -0.92
USB1-207ENST00000563149 SPG11Q96JI7 2443 aa9.32□□□□□ -0.92
USB1-207ENST00000563149 DNAJC9-AS1A6NH13 148 aa9.32□□□□□ -0.92
USB1-207ENST00000563149 F5H768 121 aa9.32□□□□□ -0.92
USB1-207ENST00000563149 COX7A2LO14548 114 aa9.32□□□□□ -0.92
USB1-207ENST00000563149 GAGE2BQ13066 116 aa9.32□□□□□ -0.92
USB1-207ENST00000563149 GAGE2EQ4V326 116 aa9.32□□□□□ -0.92
USB1-207ENST00000563149 DAND5Q8N907 189 aa9.32□□□□□ -0.92
USB1-207ENST00000563149 TMEM243Q9BU79 118 aa9.32□□□□□ -0.92
USB1-207ENST00000563149 GAGE2DQ9UEU5 116 aa9.32□□□□□ -0.92
USB1-207ENST00000563149 TRAV13-1A0A0B4J241 112 aa9.32□□□□□ -0.92
USB1-207ENST00000563149 GAGE12JA6NER3 117 aa9.32□□□□□ -0.92
USB1-207ENST00000563149 UBE2L6O14933 153 aa9.32□□□□□ -0.92
USB1-207ENST00000563149 PRB1P04280 392 aa9.32□□□□□ -0.92
USB1-207ENST00000563149 GAGE4Q13068 117 aa9.32□□□□□ -0.92
USB1-207ENST00000563149 GAGE5Q13069 117 aa9.32□□□□□ -0.92
USB1-207ENST00000563149 MEIG1Q5JSS6 88 aa9.32□□□□□ -0.92
USB1-207ENST00000563149 SHISA2Q6UWI4 295 aa9.32□□□□□ -0.92
USB1-207ENST00000563149 PRIMA1Q86XR5 153 aa9.32□□□□□ -0.92
USB1-207ENST00000563149 TRBV6-4A0A1B0GX49 114 aa9.31□□□□□ -0.92
USB1-207ENST00000563149 PF4P02776 101 aa9.3□□□□□ -0.92
USB1-207ENST00000563149 OVOL2Q9BRP0 275 aa9.3□□□□□ -0.92
USB1-207ENST00000563149 ANAPC13Q9BS18 74 aa9.3□□□□□ -0.92
USB1-207ENST00000563149 NOP10Q9NPE3 64 aaKnown RBP9.3□□□□□ -0.92
USB1-207ENST00000563149 SOSTDC1Q6X4U4 206 aa9.29□□□□□ -0.92
USB1-207ENST00000563149 ZNF843Q8N446 348 aa9.29□□□□□ -0.92
USB1-207ENST00000563149 TRAV26-1A0A087WT03 109 aa9.29□□□□□ -0.92
USB1-207ENST00000563149 NDUFA7O95182 113 aa9.29□□□□□ -0.92
USB1-207ENST00000563149 TRACP01848 142 aa9.29□□□□□ -0.92
USB1-207ENST00000563149 C15orf53Q8NAA6 179 aa9.29□□□□□ -0.92
USB1-207ENST00000563149 C16orf95Q9H693 158 aa9.29□□□□□ -0.92
USB1-207ENST00000563149 A0A1W2PRX2 142 aa9.28□□□□□ -0.92
USB1-207ENST00000563149 PLAC8L1A1L4L8 177 aa9.28□□□□□ -0.92
USB1-207ENST00000563149 ACYP1P07311 99 aa9.28□□□□□ -0.92
USB1-207ENST00000563149 GIG44P09565 113 aaPredicted RBP9.28□□□□□ -0.92
USB1-207ENST00000563149 FAM222AQ5U5X8 452 aa9.28□□□□□ -0.92
USB1-207ENST00000563149 BBC3Q96PG8 261 aaPredicted RBP9.28□□□□□ -0.92
USB1-207ENST00000563149 HIST2H2BDQ6DRA6 164 aa9.27□□□□□ -0.92
USB1-207ENST00000563149 COL12A1Q99715 3063 aa9.27□□□□□ -0.93
USB1-207ENST00000563149 TRGV2A0A075B6R0 118 aa9.27□□□□□ -0.93
USB1-207ENST00000563149 TRAV13-2A0A0B4J235 113 aa9.27□□□□□ -0.93
USB1-207ENST00000563149 CRLF1O75462 422 aa9.27□□□□□ -0.93
USB1-207ENST00000563149 TTC32Q5I0X7 151 aa9.27□□□□□ -0.93
USB1-207ENST00000563149 ANKRD17O75179 2603 aaKnown RBP9.26□□□□□ -0.93
USB1-207ENST00000563149 A0A0U1RRA0 63 aa9.26□□□□□ -0.93
USB1-207ENST00000563149 COX7B2Q8TF08 81 aa9.26□□□□□ -0.93
USB1-207ENST00000563149 ESM1Q9NQ30 184 aa9.26□□□□□ -0.93
USB1-207ENST00000563149 USP9XQ93008 2570 aaPredicted RBP9.26□□□□□ -0.93
USB1-207ENST00000563149 GAGE7O76087 117 aa9.25□□□□□ -0.93
USB1-207ENST00000563149 IGLV1-51P01701 117 aa9.25□□□□□ -0.93
USB1-207ENST00000563149 GAGE12FP0CL80 117 aa9.25□□□□□ -0.93
USB1-207ENST00000563149 GAGE12GP0CL81 117 aa9.25□□□□□ -0.93
USB1-207ENST00000563149 GAGE12IP0CL82 117 aa9.25□□□□□ -0.93
USB1-207ENST00000563149 NDUFV3P56181 108 aaKnown RBP9.25□□□□□ -0.93
USB1-207ENST00000563149 C11orf44Q8N8P7 122 aa9.25□□□□□ -0.93
USB1-207ENST00000563149 C19orf73Q9NVV2 129 aa9.25□□□□□ -0.93
USB1-207ENST00000563149 CELSR2Q9HCU4 2923 aa9.25□□□□□ -0.93
USB1-207ENST00000563149 TRGV4A0A0C4DH28 118 aa9.24□□□□□ -0.93
USB1-207ENST00000563149 HIST2H2BCQ6DN03 193 aa9.24□□□□□ -0.93
USB1-207ENST00000563149 CSNK1G2-AS1Q8NCQ2 148 aa9.24□□□□□ -0.93
USB1-207ENST00000563149 RPL28P46779 137 aaKnown RBP9.24□□□□□ -0.93
USB1-207ENST00000563149 LINC01006Q8NI28 216 aa9.24□□□□□ -0.93
USB1-207ENST00000563149 CFAP46Q8IYW2 2715 aa9.24□□□□□ -0.93
USB1-207ENST00000563149 RNASE1P07998 156 aaKnown RBP9.23□□□□□ -0.93
USB1-207ENST00000563149 GAGE6Q13070 117 aa9.23□□□□□ -0.93
USB1-207ENST00000563149 CACNA1AO00555 2505 aa9.22□□□□□ -0.93
USB1-207ENST00000563149 TRBV6-8A0A0A6YYG3 113 aa9.22□□□□□ -0.93
USB1-207ENST00000563149 NHLRC4P0CG21 123 aaPredicted RBP9.22□□□□□ -0.93
USB1-207ENST00000563149 FHL2Q14192 279 aa9.22□□□□□ -0.93
USB1-207ENST00000563149 CRYBG3Q68DQ2 2970 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 218.5 ms