RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 GAGE12JA6NER3 117 aa6.98□□□□□ -1.29
SMG1-205ENST00000561947 GAGE4Q13068 117 aa6.98□□□□□ -1.29
SMG1-205ENST00000561947 GAGE5Q13069 117 aa6.98□□□□□ -1.29
SMG1-205ENST00000561947 SRSF9Q13242 221 aaKnown RBP eCLIP6.98□□□□□ -1.29
SMG1-205ENST00000561947 GAGE13Q4V321 117 aa6.98□□□□□ -1.29
SMG1-205ENST00000561947 NOTCH2Q04721 2471 aa6.98□□□□□ -1.29
SMG1-205ENST00000561947 IGHV3-64A0A075B6Q5 118 aa6.98□□□□□ -1.29
SMG1-205ENST00000561947 FABP2P12104 132 aa6.98□□□□□ -1.29
SMG1-205ENST00000561947 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.98□□□□□ -1.29
SMG1-205ENST00000561947 NSD1Q96L73 2696 aaPredicted RBP6.98□□□□□ -1.29
SMG1-205ENST00000561947 DGAT2L7PQ6IED9 249 aa6.97□□□□□ -1.29
SMG1-205ENST00000561947 NTM-AS1Q6ZSK4 140 aa6.97□□□□□ -1.29
SMG1-205ENST00000561947 CITED1Q99966 193 aa6.97□□□□□ -1.29
SMG1-205ENST00000561947 TRBV6-4A0A1B0GX49 114 aa6.97□□□□□ -1.29
SMG1-205ENST00000561947 IGLL5B9A064 214 aa6.97□□□□□ -1.29
SMG1-205ENST00000561947 UBE2D1P51668 147 aa6.97□□□□□ -1.29
SMG1-205ENST00000561947 SPCS1Q9Y6A9 102 aa6.97□□□□□ -1.29
SMG1-205ENST00000561947 IGHV3-30-3P0DP02 117 aa6.96□□□□□ -1.29
SMG1-205ENST00000561947 SBSPONQ8IVN8 264 aa6.96□□□□□ -1.29
SMG1-205ENST00000561947 NOTCH3Q9UM47 2321 aa6.96□□□□□ -1.29
SMG1-205ENST00000561947 TRGV4A0A0C4DH28 118 aa6.96□□□□□ -1.3
SMG1-205ENST00000561947 IGHV1-58A0A0C4DH39 117 aa6.96□□□□□ -1.3
SMG1-205ENST00000561947 LINC00694P0DN24 101 aa6.96□□□□□ -1.3
SMG1-205ENST00000561947 LOC100131303A0A0U1RQF7 123 aa6.95□□□□□ -1.3
SMG1-205ENST00000561947 IGHV3-30P01768 117 aa6.95□□□□□ -1.3
SMG1-205ENST00000561947 IGHV3-30-5P0DP03 117 aa6.95□□□□□ -1.3
SMG1-205ENST00000561947 FHL2Q14192 279 aa6.95□□□□□ -1.3
SMG1-205ENST00000561947 GTSF1LQ9H1H1 148 aa6.95□□□□□ -1.3
SMG1-205ENST00000561947 GEMIN7Q9H840 131 aaKnown RBP6.95□□□□□ -1.3
SMG1-205ENST00000561947 CSDC2Q9Y534 153 aaKnown RBP6.95□□□□□ -1.3
SMG1-205ENST00000561947 TRAV8-3A0A0A6YYJ7 113 aa6.95□□□□□ -1.3
SMG1-205ENST00000561947 TIRAPP58753 221 aa6.95□□□□□ -1.3
SMG1-205ENST00000561947 SMAGPQ0VAQ4 97 aa6.95□□□□□ -1.3
SMG1-205ENST00000561947 KIR2DL5BQ8NHK3 375 aa6.95□□□□□ -1.3
SMG1-205ENST00000561947 IGLV5-45A0A087WSX0 123 aa6.94□□□□□ -1.3
SMG1-205ENST00000561947 LINC00612Q8N6U2 182 aa6.94□□□□□ -1.3
SMG1-205ENST00000561947 VSIG2Q96IQ7 327 aa6.94□□□□□ -1.3
SMG1-205ENST00000561947 X6R8D5 127 aa6.94□□□□□ -1.3
SMG1-205ENST00000561947 SMIM9A6NGZ8 99 aa6.94□□□□□ -1.3
SMG1-205ENST00000561947 C10orf126Q8N4M7 172 aa6.94□□□□□ -1.3
SMG1-205ENST00000561947 TMEM243Q9BU79 118 aa6.94□□□□□ -1.3
SMG1-205ENST00000561947 HIVEP1P15822 2718 aa6.94□□□□□ -1.3
SMG1-205ENST00000561947 SPINK8P0C7L1 97 aa6.94□□□□□ -1.3
SMG1-205ENST00000561947 FAM19A3Q7Z5A8 133 aa6.94□□□□□ -1.3
SMG1-205ENST00000561947 A0A0J9YXY3 114 aa6.93□□□□□ -1.3
SMG1-205ENST00000561947 CDKN2A-AS1Q9UH64 79 aa6.93□□□□□ -1.3
SMG1-205ENST00000561947 TMEM238C9JI98 176 aa6.93□□□□□ -1.3
SMG1-205ENST00000561947 UBE2L6O14933 153 aa6.93□□□□□ -1.3
SMG1-205ENST00000561947 CDC42SE2Q9NRR3 84 aa6.93□□□□□ -1.3
SMG1-205ENST00000561947 H7C423 109 aa6.92□□□□□ -1.3
SMG1-205ENST00000561947 DEFB130BP0DP73 79 aa6.92□□□□□ -1.3
SMG1-205ENST00000561947 DEFB130AP0DP74 79 aa6.92□□□□□ -1.3
SMG1-205ENST00000561947 HERVK_113P63121 156 aa6.92□□□□□ -1.3
SMG1-205ENST00000561947 LINC00242Q5T6M2 205 aa6.92□□□□□ -1.3
SMG1-205ENST00000561947 COX6A2Q02221 97 aa6.92□□□□□ -1.3
SMG1-205ENST00000561947 PGPEP1Q9NXJ5 209 aa6.92□□□□□ -1.3
SMG1-205ENST00000561947 NDUFA12Q9UI09 145 aa6.92□□□□□ -1.3
SMG1-205ENST00000561947 APOMO95445 188 aa6.91□□□□□ -1.3
SMG1-205ENST00000561947 ZFAND6Q6FIF0 208 aa6.91□□□□□ -1.3
SMG1-205ENST00000561947 TMEM101Q96IK0 257 aa6.91□□□□□ -1.3
SMG1-205ENST00000561947 A8MZ25 164 aa6.91□□□□□ -1.3
SMG1-205ENST00000561947 APOC4P55056 127 aa6.91□□□□□ -1.3
SMG1-205ENST00000561947 WFDC9Q8NEX5 89 aa6.91□□□□□ -1.3
SMG1-205ENST00000561947 TRAV13-1A0A0B4J241 112 aa6.9□□□□□ -1.3
SMG1-205ENST00000561947 CFC1BP0CG36 223 aa6.9□□□□□ -1.3
SMG1-205ENST00000561947 CFC1P0CG37 223 aa6.9□□□□□ -1.3
SMG1-205ENST00000561947 LITAFQ99732 161 aa6.9□□□□□ -1.3
SMG1-205ENST00000561947 TSPAN13O95857 204 aa6.9□□□□□ -1.31
SMG1-205ENST00000561947 MUSTN1Q8IVN3 82 aa6.9□□□□□ -1.31
SMG1-205ENST00000561947 TRBV6-8A0A0A6YYG3 113 aa6.89□□□□□ -1.31
SMG1-205ENST00000561947 IGLV5-39A0A0G2JS06 123 aa6.89□□□□□ -1.31
SMG1-205ENST00000561947 RPL24P83731 157 aaKnown RBP6.89□□□□□ -1.31
SMG1-205ENST00000561947 DEFB135Q30KP9 77 aa6.89□□□□□ -1.31
SMG1-205ENST00000561947 VWFP04275 2813 aa6.89□□□□□ -1.31
SMG1-205ENST00000561947 A4D1N5 150 aa6.89□□□□□ -1.31
SMG1-205ENST00000561947 LYRM9A8MSI8 78 aa6.89□□□□□ -1.31
SMG1-205ENST00000561947 WIPF1O43516 503 aa6.89□□□□□ -1.31
SMG1-205ENST00000561947 GAGE6Q13070 117 aa6.89□□□□□ -1.31
SMG1-205ENST00000561947 FAM222AQ5U5X8 452 aa6.89□□□□□ -1.31
SMG1-205ENST00000561947 NDUFA1O15239 70 aa6.88□□□□□ -1.31
SMG1-205ENST00000561947 OCIAD2Q56VL3 154 aa6.88□□□□□ -1.31
SMG1-205ENST00000561947 SPANXDQ9BXN6 97 aa6.88□□□□□ -1.31
SMG1-205ENST00000561947 SPANXCQ9NY87 97 aa6.88□□□□□ -1.31
SMG1-205ENST00000561947 SMIM1B2RUZ4 78 aa6.88□□□□□ -1.31
SMG1-205ENST00000561947 GYPEP15421 78 aa6.88□□□□□ -1.31
SMG1-205ENST00000561947 PRO1854Q9UHT4 67 aa6.88□□□□□ -1.31
SMG1-205ENST00000561947 TENM1Q9UKZ4 2725 aa6.87□□□□□ -1.31
SMG1-205ENST00000561947 PRO0255Q9UI72 69 aa6.87□□□□□ -1.31
SMG1-205ENST00000561947 A0A0B4J2C4 111 aa6.87□□□□□ -1.31
SMG1-205ENST00000561947 F5H768 121 aa6.87□□□□□ -1.31
SMG1-205ENST00000561947 EIF4EBP3O60516 100 aaPredicted RBP6.87□□□□□ -1.31
SMG1-205ENST00000561947 TIMM17BO60830 172 aa6.87□□□□□ -1.31
SMG1-205ENST00000561947 MIAQ16674 131 aa6.87□□□□□ -1.31
SMG1-205ENST00000561947 ADAMTSL4-AS1Q5T5F5 129 aa6.87□□□□□ -1.31
SMG1-205ENST00000561947 ATP6V0E2Q8NHE4 81 aa6.87□□□□□ -1.31
SMG1-205ENST00000561947 CHCHD5Q9BSY4 110 aa6.87□□□□□ -1.31
SMG1-205ENST00000561947 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.86□□□□□ -1.31
SMG1-205ENST00000561947 IGHV4-28A0A0C4DH34 117 aa6.86□□□□□ -1.31
SMG1-205ENST00000561947 IGLV4-60A0A075B6I1 120 aa6.86□□□□□ -1.31
SMG1-205ENST00000561947 H3BMG7 143 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms