RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 IGLV5-39A0A0G2JS06 123 aa12.77□□□□□ -0.37
TRPM1-211ENST00000560658 H3BT86 120 aa12.77□□□□□ -0.37
TRPM1-211ENST00000560658 Q96MF0 132 aa12.77□□□□□ -0.37
TRPM1-211ENST00000560658 ICOSQ9Y6W8 199 aa12.77□□□□□ -0.37
TRPM1-211ENST00000560658 TRAV4A0A0B4J268 109 aa12.76□□□□□ -0.37
TRPM1-211ENST00000560658 SPINK8P0C7L1 97 aa12.76□□□□□ -0.37
TRPM1-211ENST00000560658 ODF3L2Q3SX64 289 aa12.76□□□□□ -0.37
TRPM1-211ENST00000560658 NOTCH2Q04721 2471 aa12.75□□□□□ -0.37
TRPM1-211ENST00000560658 Q6ZSV7 163 aa12.75□□□□□ -0.37
TRPM1-211ENST00000560658 FAM110AQ9BQ89 295 aa12.75□□□□□ -0.37
TRPM1-211ENST00000560658 COL12A1Q99715 3063 aa12.74□□□□□ -0.37
TRPM1-211ENST00000560658 USP9YO00507 2555 aaPredicted RBP12.74□□□□□ -0.37
TRPM1-211ENST00000560658 K7EQD1 137 aa12.74□□□□□ -0.37
TRPM1-211ENST00000560658 TRIAP1O43715 76 aa12.74□□□□□ -0.37
TRPM1-211ENST00000560658 H7C2G1 150 aa12.73□□□□□ -0.37
TRPM1-211ENST00000560658 H7C423 109 aa12.73□□□□□ -0.37
TRPM1-211ENST00000560658 ADAMTSL4-AS1Q5T5F5 129 aa12.73□□□□□ -0.37
TRPM1-211ENST00000560658 C1orf158Q8N1D5 194 aa12.73□□□□□ -0.37
TRPM1-211ENST00000560658 CDKN2A-AS1Q9UH64 79 aa12.73□□□□□ -0.37
TRPM1-211ENST00000560658 ADARB2-AS1A8MUL3 147 aa12.73□□□□□ -0.37
TRPM1-211ENST00000560658 HERV-K104P63124 156 aa12.73□□□□□ -0.37
TRPM1-211ENST00000560658 TMEM101Q96IK0 257 aa12.73□□□□□ -0.37
TRPM1-211ENST00000560658 RNASE13Q5GAN3 156 aaKnown RBP12.72□□□□□ -0.37
TRPM1-211ENST00000560658 XCL2Q9UBD3 114 aa12.72□□□□□ -0.37
TRPM1-211ENST00000560658 TRGV1A0A0A0MS02 117 aa12.71□□□□□ -0.37
TRPM1-211ENST00000560658 IGHV3-38A0A0C4DH36 116 aa12.71□□□□□ -0.37
TRPM1-211ENST00000560658 CCL24O00175 119 aa12.71□□□□□ -0.37
TRPM1-211ENST00000560658 IGHV3OR16-12A0A075B7B8 117 aa12.7□□□□□ -0.38
TRPM1-211ENST00000560658 Q9UF83 564 aa12.7□□□□□ -0.38
TRPM1-211ENST00000560658 CR1P17927 2039 aa12.7□□□□□ -0.38
TRPM1-211ENST00000560658 LST1O00453 97 aa12.7□□□□□ -0.38
TRPM1-211ENST00000560658 PRM2P04554 102 aa12.7□□□□□ -0.38
TRPM1-211ENST00000560658 CKS1BP61024 79 aa12.7□□□□□ -0.38
TRPM1-211ENST00000560658 LINC00242Q5T6M2 205 aa12.7□□□□□ -0.38
TRPM1-211ENST00000560658 C16orf74Q96GX8 76 aa12.7□□□□□ -0.38
TRPM1-211ENST00000560658 UBE2WQ96B02 151 aa12.69□□□□□ -0.38
TRPM1-211ENST00000560658 DNAJC9-AS1A6NH13 148 aa12.68□□□□□ -0.38
TRPM1-211ENST00000560658 XGP55808 180 aa12.68□□□□□ -0.38
TRPM1-211ENST00000560658 KRTAP10-9P60411 292 aa12.68□□□□□ -0.38
TRPM1-211ENST00000560658 MRPL23Q16540 153 aaKnown RBP12.68□□□□□ -0.38
TRPM1-211ENST00000560658 C2orf82Q6UX34 121 aa12.68□□□□□ -0.38
TRPM1-211ENST00000560658 KRTAP1-3Q8IUG1 177 aa12.68□□□□□ -0.38
TRPM1-211ENST00000560658 NTN5Q8WTR8 489 aaPredicted RBP12.68□□□□□ -0.38
TRPM1-211ENST00000560658 MT-ATP8P03928 68 aa12.67□□□□□ -0.38
TRPM1-211ENST00000560658 C16orf95Q9H693 158 aa12.67□□□□□ -0.38
TRPM1-211ENST00000560658 NACAE9PAV3 2078 aa12.67□□□□□ -0.38
TRPM1-211ENST00000560658 LINC00308Q8TCZ7 52 aa12.66□□□□□ -0.38
TRPM1-211ENST00000560658 CDC42SE2Q9NRR3 84 aa12.66□□□□□ -0.38
TRPM1-211ENST00000560658 CSPG4Q6UVK1 2322 aa12.66□□□□□ -0.38
TRPM1-211ENST00000560658 CREBBPQ92793 2442 aa12.66□□□□□ -0.38
TRPM1-211ENST00000560658 TRBV6-4A0A1B0GX49 114 aa12.66□□□□□ -0.38
TRPM1-211ENST00000560658 SMIM1B2RUZ4 78 aa12.66□□□□□ -0.38
TRPM1-211ENST00000560658 TMEM243Q9BU79 118 aa12.66□□□□□ -0.38
TRPM1-211ENST00000560658 Q9H8V8 135 aa12.66□□□□□ -0.38
TRPM1-211ENST00000560658 TRAV8-4A0A0B4J246 113 aa12.65□□□□□ -0.38
TRPM1-211ENST00000560658 FAM240AA0A1B0GVK7 77 aa12.65□□□□□ -0.38
TRPM1-211ENST00000560658 UBE2L6O14933 153 aa12.65□□□□□ -0.38
TRPM1-211ENST00000560658 DEFB121Q5J5C9 76 aa12.65□□□□□ -0.38
TRPM1-211ENST00000560658 HIST2H2BCQ6DN03 193 aa12.65□□□□□ -0.38
TRPM1-211ENST00000560658 COX6A2Q02221 97 aa12.64□□□□□ -0.39
TRPM1-211ENST00000560658 Q6Q795 121 aa12.64□□□□□ -0.39
TRPM1-211ENST00000560658 OVOL2Q9BRP0 275 aa12.64□□□□□ -0.39
TRPM1-211ENST00000560658 A8MZ25 164 aa12.63□□□□□ -0.39
TRPM1-211ENST00000560658 PF4P02776 101 aa12.63□□□□□ -0.39
TRPM1-211ENST00000560658 ZNF625Q96I27 306 aaPredicted RBP12.63□□□□□ -0.39
TRPM1-211ENST00000560658 NTM-AS1Q6ZSK4 140 aa12.62□□□□□ -0.39
TRPM1-211ENST00000560658 Q6ZTI0 123 aa12.62□□□□□ -0.39
TRPM1-211ENST00000560658 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.62□□□□□ -0.39
TRPM1-211ENST00000560658 SNCGO76070 127 aa12.62□□□□□ -0.39
TRPM1-211ENST00000560658 PRIMA1Q86XR5 153 aa12.62□□□□□ -0.39
TRPM1-211ENST00000560658 CITED1Q99966 193 aa12.62□□□□□ -0.39
TRPM1-211ENST00000560658 SPG11Q96JI7 2443 aa12.62□□□□□ -0.39
TRPM1-211ENST00000560658 F5H768 121 aa12.61□□□□□ -0.39
TRPM1-211ENST00000560658 COX7A2LO14548 114 aa12.61□□□□□ -0.39
TRPM1-211ENST00000560658 LINC00694P0DN24 101 aa12.61□□□□□ -0.39
TRPM1-211ENST00000560658 SVEP1Q4LDE5 3571 aa12.61□□□□□ -0.39
TRPM1-211ENST00000560658 GAGE12JA6NER3 117 aa12.6□□□□□ -0.39
TRPM1-211ENST00000560658 RNASE1P07998 156 aaKnown RBP12.6□□□□□ -0.39
TRPM1-211ENST00000560658 GAGE4Q13068 117 aa12.6□□□□□ -0.39
TRPM1-211ENST00000560658 GAGE5Q13069 117 aa12.6□□□□□ -0.39
TRPM1-211ENST00000560658 FAM222AQ5U5X8 452 aa12.6□□□□□ -0.39
TRPM1-211ENST00000560658 TEP1Q99973 2627 aaKnown RBP12.6□□□□□ -0.39
TRPM1-211ENST00000560658 MEIG1Q5JSS6 88 aa12.59□□□□□ -0.39
TRPM1-211ENST00000560658 CITED2Q99967 270 aaPredicted RBP12.59□□□□□ -0.39
TRPM1-211ENST00000560658 TRAV13-1A0A0B4J241 112 aa12.59□□□□□ -0.39
TRPM1-211ENST00000560658 IGLV1-51P01701 117 aa12.59□□□□□ -0.39
TRPM1-211ENST00000560658 ACYP1P07311 99 aa12.59□□□□□ -0.39
TRPM1-211ENST00000560658 SHISA2Q6UWI4 295 aa12.59□□□□□ -0.39
TRPM1-211ENST00000560658 NOP10Q9NPE3 64 aaKnown RBP12.59□□□□□ -0.39
TRPM1-211ENST00000560658 TRACP01848 142 aa12.58□□□□□ -0.4
TRPM1-211ENST00000560658 NPC2P61916 151 aa12.58□□□□□ -0.4
TRPM1-211ENST00000560658 ANKRD17O75179 2603 aaKnown RBP12.57□□□□□ -0.4
TRPM1-211ENST00000560658 TRGV2A0A075B6R0 118 aa12.57□□□□□ -0.4
TRPM1-211ENST00000560658 TRAV13-2A0A0B4J235 113 aa12.57□□□□□ -0.4
TRPM1-211ENST00000560658 TEX49A0A1B0GTD5 131 aa12.57□□□□□ -0.4
TRPM1-211ENST00000560658 GAGE2BQ13066 116 aa12.57□□□□□ -0.4
TRPM1-211ENST00000560658 GAGE2EQ4V326 116 aa12.57□□□□□ -0.4
TRPM1-211ENST00000560658 GAGE2DQ9UEU5 116 aa12.57□□□□□ -0.4
TRPM1-211ENST00000560658 CELSR1Q9NYQ6 3014 aa12.56□□□□□ -0.4
TRPM1-211ENST00000560658 A0A1W2PRX2 142 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms