RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 Q6ZUT4 128 aa5.8□□□□□ -1.48
SMAD3-212ENST00000559937 GTSF1LQ9H1H1 148 aa5.8□□□□□ -1.48
SMAD3-212ENST00000559937 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.79□□□□□ -1.48
SMAD3-212ENST00000559937 IGHV3OR16-12A0A075B7B8 117 aa5.79□□□□□ -1.48
SMAD3-212ENST00000559937 A0A0B4J2C4 111 aa5.79□□□□□ -1.48
SMAD3-212ENST00000559937 PLAC8L1A1L4L8 177 aa5.79□□□□□ -1.48
SMAD3-212ENST00000559937 IGKV2-29A2NJV5 120 aaPredicted RBP5.79□□□□□ -1.48
SMAD3-212ENST00000559937 H7C423 109 aa5.79□□□□□ -1.48
SMAD3-212ENST00000559937 TIMM17BO60830 172 aa5.79□□□□□ -1.48
SMAD3-212ENST00000559937 UBE2D3P61077 147 aa5.79□□□□□ -1.48
SMAD3-212ENST00000559937 UBE2D2P62837 147 aa5.79□□□□□ -1.48
SMAD3-212ENST00000559937 RPL24P83731 157 aaKnown RBP5.79□□□□□ -1.48
SMAD3-212ENST00000559937 DGAT2L7PQ6IED9 249 aa5.79□□□□□ -1.48
SMAD3-212ENST00000559937 Q6ZTI0 123 aa5.79□□□□□ -1.48
SMAD3-212ENST00000559937 SBSPONQ8IVN8 264 aa5.79□□□□□ -1.48
SMAD3-212ENST00000559937 CSNK1G2-AS1Q8NCQ2 148 aa5.79□□□□□ -1.48
SMAD3-212ENST00000559937 VSIG2Q96IQ7 327 aa5.79□□□□□ -1.48
SMAD3-212ENST00000559937 SPANXDQ9BXN6 97 aa5.79□□□□□ -1.48
SMAD3-212ENST00000559937 PGPEP1Q9NXJ5 209 aa5.79□□□□□ -1.48
SMAD3-212ENST00000559937 SPANXCQ9NY87 97 aa5.79□□□□□ -1.48
SMAD3-212ENST00000559937 FBN1P35555 2871 aaKnown RBP5.78□□□□□ -1.48
SMAD3-212ENST00000559937 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.78□□□□□ -1.48
SMAD3-212ENST00000559937 A0A0J9YXY3 114 aa5.78□□□□□ -1.48
SMAD3-212ENST00000559937 TRBV6-4A0A1B0GX49 114 aa5.78□□□□□ -1.48
SMAD3-212ENST00000559937 TSPAN13O95857 204 aa5.78□□□□□ -1.48
SMAD3-212ENST00000559937 INSL3P51460 131 aa5.78□□□□□ -1.48
SMAD3-212ENST00000559937 HERVK_113P63121 156 aa5.78□□□□□ -1.48
SMAD3-212ENST00000559937 ZFAND6Q6FIF0 208 aa5.78□□□□□ -1.48
SMAD3-212ENST00000559937 C10orf126Q8N4M7 172 aa5.78□□□□□ -1.48
SMAD3-212ENST00000559937 LINC00482Q8N8I6 264 aa5.78□□□□□ -1.48
SMAD3-212ENST00000559937 RNF183Q96D59 192 aa5.78□□□□□ -1.48
SMAD3-212ENST00000559937 GEMIN7Q9H840 131 aaKnown RBP5.78□□□□□ -1.48
SMAD3-212ENST00000559937 Q9UF83 564 aa5.78□□□□□ -1.48
SMAD3-212ENST00000559937 TRBV20-1A0A075B6N2 111 aa5.77□□□□□ -1.49
SMAD3-212ENST00000559937 IGHV3-38A0A0C4DH36 116 aa5.77□□□□□ -1.49
SMAD3-212ENST00000559937 G3V4G9 280 aa5.77□□□□□ -1.49
SMAD3-212ENST00000559937 PF4P02776 101 aa5.77□□□□□ -1.49
SMAD3-212ENST00000559937 CFC1BP0CG36 223 aa5.77□□□□□ -1.49
SMAD3-212ENST00000559937 CFC1P0CG37 223 aa5.77□□□□□ -1.49
SMAD3-212ENST00000559937 CEMP1Q6PRD7 247 aaPredicted RBP5.77□□□□□ -1.49
SMAD3-212ENST00000559937 NOP10Q9NPE3 64 aaKnown RBP5.77□□□□□ -1.49
SMAD3-212ENST00000559937 PRO1854Q9UHT4 67 aa5.77□□□□□ -1.49
SMAD3-212ENST00000559937 NDUFA12Q9UI09 145 aa5.77□□□□□ -1.49
SMAD3-212ENST00000559937 SVEP1Q4LDE5 3571 aa5.77□□□□□ -1.49
SMAD3-212ENST00000559937 IGLV5-39A0A0G2JS06 123 aa5.76□□□□□ -1.49
SMAD3-212ENST00000559937 APOMO95445 188 aa5.76□□□□□ -1.49
SMAD3-212ENST00000559937 IFITM1P13164 125 aa5.76□□□□□ -1.49
SMAD3-212ENST00000559937 RPL35AP18077 110 aaKnown RBP5.76□□□□□ -1.49
SMAD3-212ENST00000559937 GAGE13Q4V321 117 aa5.76□□□□□ -1.49
SMAD3-212ENST00000559937 NTM-AS1Q6ZSK4 140 aa5.76□□□□□ -1.49
SMAD3-212ENST00000559937 KIR2DL5BQ8NHK3 375 aa5.76□□□□□ -1.49
SMAD3-212ENST00000559937 VPS25Q9BRG1 176 aa5.76□□□□□ -1.49
SMAD3-212ENST00000559937 TMEM243Q9BU79 118 aa5.76□□□□□ -1.49
SMAD3-212ENST00000559937 PRO0461Q9UI25 63 aa5.76□□□□□ -1.49
SMAD3-212ENST00000559937 NBEAL1Q6ZS30 2694 aa5.76□□□□□ -1.49
SMAD3-212ENST00000559937 IGHV3-64A0A075B6Q5 118 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 TRGV2A0A075B6R0 118 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 TRAV8-3A0A0A6YYJ7 113 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 A4D1N5 150 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 GAGE12JA6NER3 117 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 SMIM9A6NGZ8 99 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 INAFM1C9JVW0 142 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 J3QR89 54 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 NDUFA1O15239 70 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 GAGE7O76087 117 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 IGHV3-33P01772 117 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 GAGE12FP0CL80 117 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 GAGE12GP0CL81 117 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 GAGE12IP0CL82 117 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 LINC00694P0DN24 101 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 KRTAP10-3P60369 221 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 GAGE4Q13068 117 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 GAGE5Q13069 117 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 MIAQ16674 131 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 RNF151Q2KHN1 245 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 RNASE13Q5GAN3 156 aaKnown RBP5.75□□□□□ -1.49
SMAD3-212ENST00000559937 C9orf66Q5T8R8 295 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 PRIMA1Q86XR5 153 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 MUSTN1Q8IVN3 82 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 LINC00612Q8N6U2 182 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 ATP6V0E2Q8NHE4 81 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 TMEM101Q96IK0 257 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 LITAFQ99732 161 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 WFDC10AQ9H1F0 79 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 PPDPFQ9H3Y8 114 aa5.75□□□□□ -1.49
SMAD3-212ENST00000559937 TRGV4A0A0C4DH28 118 aa5.74□□□□□ -1.49
SMAD3-212ENST00000559937 H3BMG7 143 aa5.74□□□□□ -1.49
SMAD3-212ENST00000559937 UBE2L6O14933 153 aa5.74□□□□□ -1.49
SMAD3-212ENST00000559937 SPINK8P0C7L1 97 aa5.74□□□□□ -1.49
SMAD3-212ENST00000559937 LINC00242Q5T6M2 205 aa5.74□□□□□ -1.49
SMAD3-212ENST00000559937 COPS9Q8WXC6 57 aa5.74□□□□□ -1.49
SMAD3-212ENST00000559937 CDC42SE2Q9NRR3 84 aa5.74□□□□□ -1.49
SMAD3-212ENST00000559937 CDKN2A-AS1Q9UH64 79 aa5.74□□□□□ -1.49
SMAD3-212ENST00000559937 FBN3Q75N90 2809 aa5.74□□□□□ -1.49
SMAD3-212ENST00000559937 LOC107984156A0A0G2JMH3 177 aa5.73□□□□□ -1.49
SMAD3-212ENST00000559937 M0QXV9 152 aa5.73□□□□□ -1.49
SMAD3-212ENST00000559937 CRLF1O75462 422 aa5.73□□□□□ -1.49
SMAD3-212ENST00000559937 FHL2Q14192 279 aa5.73□□□□□ -1.49
SMAD3-212ENST00000559937 WFDC2Q14508 124 aa5.73□□□□□ -1.49
SMAD3-212ENST00000559937 ARL17AQ8IVW1 177 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms