RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 LRRC75A-AS1Q8N1F1 130 aa11.15□□□□□ -0.62
TMEM55B-207ENST00000557041 PRO1854Q9UHT4 67 aa11.15□□□□□ -0.62
TMEM55B-207ENST00000557041 C9JAW5 83 aa11.15□□□□□ -0.63
TMEM55B-207ENST00000557041 CDKN2A-AS1Q9UH64 79 aa11.15□□□□□ -0.63
TMEM55B-207ENST00000557041 CR1P17927 2039 aa11.14□□□□□ -0.63
TMEM55B-207ENST00000557041 TMEM101Q96IK0 257 aa11.14□□□□□ -0.63
TMEM55B-207ENST00000557041 PRIMA1Q86XR5 153 aa11.13□□□□□ -0.63
TMEM55B-207ENST00000557041 TSPAN13O95857 204 aa11.13□□□□□ -0.63
TMEM55B-207ENST00000557041 UFSP1Q6NVU6 142 aa11.13□□□□□ -0.63
TMEM55B-207ENST00000557041 LEPROTO15243 131 aa11.12□□□□□ -0.63
TMEM55B-207ENST00000557041 CIRBPQ14011 172 aaKnown RBP11.12□□□□□ -0.63
TMEM55B-207ENST00000557041 C1orf158Q8N1D5 194 aa11.12□□□□□ -0.63
TMEM55B-207ENST00000557041 INSL3P51460 131 aa11.12□□□□□ -0.63
TMEM55B-207ENST00000557041 SLC25A29Q8N8R3 303 aa11.12□□□□□ -0.63
TMEM55B-207ENST00000557041 FSHBP01225 129 aa11.11□□□□□ -0.63
TMEM55B-207ENST00000557041 NDUFA11Q86Y39 141 aa11.11□□□□□ -0.63
TMEM55B-207ENST00000557041 Q9H8V8 135 aa11.11□□□□□ -0.63
TMEM55B-207ENST00000557041 TMEM223A0PJW6 202 aa11.11□□□□□ -0.63
TMEM55B-207ENST00000557041 CFC1BP0CG36 223 aa11.11□□□□□ -0.63
TMEM55B-207ENST00000557041 CFC1P0CG37 223 aa11.11□□□□□ -0.63
TMEM55B-207ENST00000557041 LINC00482Q8N8I6 264 aa11.11□□□□□ -0.63
TMEM55B-207ENST00000557041 NOTCH1P46531 2555 aa11.1□□□□□ -0.63
TMEM55B-207ENST00000557041 LINC00694P0DN24 101 aa11.1□□□□□ -0.63
TMEM55B-207ENST00000557041 F8W1H4 67 aa11.09□□□□□ -0.63
TMEM55B-207ENST00000557041 A0A0J9YXY3 114 aa11.09□□□□□ -0.63
TMEM55B-207ENST00000557041 K7EQD1 137 aa11.08□□□□□ -0.64
TMEM55B-207ENST00000557041 COX6CP09669 75 aa11.08□□□□□ -0.64
TMEM55B-207ENST00000557041 C10orf126Q8N4M7 172 aa11.08□□□□□ -0.64
TMEM55B-207ENST00000557041 POM121L12Q8N7R1 296 aa11.08□□□□□ -0.64
TMEM55B-207ENST00000557041 ZNF469Q96JG9 3925 aaPredicted RBP11.08□□□□□ -0.64
TMEM55B-207ENST00000557041 INAFM1C9JVW0 142 aa11.08□□□□□ -0.64
TMEM55B-207ENST00000557041 NFE4Q86UQ8 179 aa11.08□□□□□ -0.64
TMEM55B-207ENST00000557041 CRLF1O75462 422 aa11.07□□□□□ -0.64
TMEM55B-207ENST00000557041 C5orf38Q86SI9 138 aa11.07□□□□□ -0.64
TMEM55B-207ENST00000557041 TMEM243Q9BU79 118 aa11.07□□□□□ -0.64
TMEM55B-207ENST00000557041 TCL1BO95988 128 aa11.07□□□□□ -0.64
TMEM55B-207ENST00000557041 IGHV3-30P01768 117 aa11.07□□□□□ -0.64
TMEM55B-207ENST00000557041 IGHV3-30-5P0DP03 117 aa11.07□□□□□ -0.64
TMEM55B-207ENST00000557041 PFN2P35080 140 aa11.07□□□□□ -0.64
TMEM55B-207ENST00000557041 A0A1B0GV72 72 aa11.07□□□□□ -0.64
TMEM55B-207ENST00000557041 RPL32P62910 135 aaKnown RBP11.07□□□□□ -0.64
TMEM55B-207ENST00000557041 SPANXA1Q9NS26 97 aa11.07□□□□□ -0.64
TMEM55B-207ENST00000557041 TMEM263Q8WUH6 116 aaKnown RBP11.06□□□□□ -0.64
TMEM55B-207ENST00000557041 C1QTNF4Q9BXJ3 329 aa11.06□□□□□ -0.64
TMEM55B-207ENST00000557041 UBE2D4Q9Y2X8 147 aa11.06□□□□□ -0.64
TMEM55B-207ENST00000557041 G3V4G9 280 aa11.06□□□□□ -0.64
TMEM55B-207ENST00000557041 KRTAP1-3Q8IUG1 177 aa11.06□□□□□ -0.64
TMEM55B-207ENST00000557041 OR13C6PQ8NH95 151 aa11.06□□□□□ -0.64
TMEM55B-207ENST00000557041 IGHV1-58A0A0C4DH39 117 aa11.05□□□□□ -0.64
TMEM55B-207ENST00000557041 LINC00158P58513 81 aa11.05□□□□□ -0.64
TMEM55B-207ENST00000557041 TMEM86BQ8N661 226 aa11.05□□□□□ -0.64
TMEM55B-207ENST00000557041 RNF152Q8N8N0 203 aa11.05□□□□□ -0.64
TMEM55B-207ENST00000557041 NBEAL1Q6ZS30 2694 aa11.05□□□□□ -0.64
TMEM55B-207ENST00000557041 C11orf72Q8NBR9 251 aa11.05□□□□□ -0.64
TMEM55B-207ENST00000557041 DEFB135Q30KP9 77 aa11.05□□□□□ -0.64
TMEM55B-207ENST00000557041 CHCHD7Q9BUK0 85 aa11.05□□□□□ -0.64
TMEM55B-207ENST00000557041 STAB1Q9NY15 2570 aa11.05□□□□□ -0.64
TMEM55B-207ENST00000557041 VWFP04275 2813 aa11.04□□□□□ -0.64
TMEM55B-207ENST00000557041 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.04□□□□□ -0.64
TMEM55B-207ENST00000557041 COX6A2Q02221 97 aa11.04□□□□□ -0.64
TMEM55B-207ENST00000557041 SIGMAR1Q99720 223 aa11.04□□□□□ -0.64
TMEM55B-207ENST00000557041 Q8N2B8 174 aa11.03□□□□□ -0.64
TMEM55B-207ENST00000557041 VSIG2Q96IQ7 327 aa11.03□□□□□ -0.64
TMEM55B-207ENST00000557041 RPL13AP40429 203 aaKnown RBP11.03□□□□□ -0.64
TMEM55B-207ENST00000557041 XCL1P47992 114 aa11.03□□□□□ -0.64
TMEM55B-207ENST00000557041 ADAMTSL4-AS1Q5T5F5 129 aa11.03□□□□□ -0.64
TMEM55B-207ENST00000557041 TRAV25A0A0B4J276 109 aa11.03□□□□□ -0.64
TMEM55B-207ENST00000557041 IGLV10-54A0A075B6I4 117 aa11.02□□□□□ -0.65
TMEM55B-207ENST00000557041 GAGE12HA6NDE8 117 aa11.02□□□□□ -0.65
TMEM55B-207ENST00000557041 RS1O15537 224 aa11.02□□□□□ -0.65
TMEM55B-207ENST00000557041 LY6G6DO95868 133 aa11.02□□□□□ -0.65
TMEM55B-207ENST00000557041 CLEC2BQ92478 149 aa11.02□□□□□ -0.65
TMEM55B-207ENST00000557041 SLC25A20O43772 301 aa11.01□□□□□ -0.65
TMEM55B-207ENST00000557041 GYPEP15421 78 aa11.01□□□□□ -0.65
TMEM55B-207ENST00000557041 SPANXB1Q9NS25 103 aaPredicted RBP11.01□□□□□ -0.65
TMEM55B-207ENST00000557041 DNAJC30Q96LL9 226 aa11.01□□□□□ -0.65
TMEM55B-207ENST00000557041 MGAM2Q2M2H8 2515 aa11.01□□□□□ -0.65
TMEM55B-207ENST00000557041 HERVK_113P63121 156 aa11□□□□□ -0.65
TMEM55B-207ENST00000557041 HIVEP1P15822 2718 aa11□□□□□ -0.65
TMEM55B-207ENST00000557041 RNASE1P07998 156 aaKnown RBP11□□□□□ -0.65
TMEM55B-207ENST00000557041 NTN5Q8WTR8 489 aaPredicted RBP11□□□□□ -0.65
TMEM55B-207ENST00000557041 C16orf74Q96GX8 76 aa11□□□□□ -0.65
TMEM55B-207ENST00000557041 UBE2D1P51668 147 aa11□□□□□ -0.65
TMEM55B-207ENST00000557041 OTOGQ6ZRI0 2925 aa10.99□□□□□ -0.65
TMEM55B-207ENST00000557041 MRPS36P82909 103 aaKnown RBP10.99□□□□□ -0.65
TMEM55B-207ENST00000557041 C6orf226Q5I0X4 101 aa10.99□□□□□ -0.65
TMEM55B-207ENST00000557041 TRAV4A0A0B4J268 109 aa10.99□□□□□ -0.65
TMEM55B-207ENST00000557041 TINCRA0A1B0GVN0 87 aa10.99□□□□□ -0.65
TMEM55B-207ENST00000557041 C2orf82Q6UX34 121 aa10.99□□□□□ -0.65
TMEM55B-207ENST00000557041 PYGO1Q9Y3Y4 419 aa10.99□□□□□ -0.65
TMEM55B-207ENST00000557041 DAZ2Q13117 558 aaKnown RBP10.98□□□□□ -0.65
TMEM55B-207ENST00000557041 DAZ4Q86SG3 579 aaKnown RBP10.98□□□□□ -0.65
TMEM55B-207ENST00000557041 DAZ3Q9NR90 486 aaKnown RBP10.98□□□□□ -0.65
TMEM55B-207ENST00000557041 F5H768 121 aa10.98□□□□□ -0.65
TMEM55B-207ENST00000557041 IGHV3-33P01772 117 aa10.98□□□□□ -0.65
TMEM55B-207ENST00000557041 PIK3CD-AS1Q5SR53 167 aa10.98□□□□□ -0.65
TMEM55B-207ENST00000557041 CMC4P56277 68 aaPredicted RBP10.97□□□□□ -0.65
TMEM55B-207ENST00000557041 COL6A5A8TX70 2615 aa10.97□□□□□ -0.65
TMEM55B-207ENST00000557041 TRBV20-1A0A075B6N2 111 aa10.97□□□□□ -0.65
TMEM55B-207ENST00000557041 ANKRD29Q8N6D5 301 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 339.6 ms