RNA–Protein interactions for RNA: ENST00000555970.5

NEMF-208, Transcript of nuclear export mediator factor, human

TSL 2

Gene NEMF, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEMF-208	ENST00000555970	CEMP1	Q6PRD7	247 aa	Predicted RBP	5.12	□□□□□ -1.59
NEMF-208	ENST00000555970	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	5.11	□□□□□ -1.59
NEMF-208	ENST00000555970	IGHV3-73	A0A0B4J1V6	119 aa		5.11	□□□□□ -1.59
NEMF-208	ENST00000555970	IGKV2-29	A2NJV5	120 aa	Predicted RBP	5.11	□□□□□ -1.59
NEMF-208	ENST00000555970	KRTAP10-3	P60369	221 aa		5.11	□□□□□ -1.59
NEMF-208	ENST00000555970	ADAMTSL4-AS1	Q5T5F5	129 aa		5.11	□□□□□ -1.59
NEMF-208	ENST00000555970		Q6ZTI0	123 aa		5.11	□□□□□ -1.59
NEMF-208	ENST00000555970	LINC00482	Q8N8I6	264 aa		5.11	□□□□□ -1.59
NEMF-208	ENST00000555970	TMEM101	Q96IK0	257 aa		5.11	□□□□□ -1.59
NEMF-208	ENST00000555970	XCL2	Q9UBD3	114 aa		5.11	□□□□□ -1.59
NEMF-208	ENST00000555970	RPL36A	P83881	106 aa	Known RBP	5.11	□□□□□ -1.59
NEMF-208	ENST00000555970	RPL36AL	Q969Q0	106 aa	Known RBP	5.11	□□□□□ -1.59
NEMF-208	ENST00000555970	NDUFA12	Q9UI09	145 aa		5.11	□□□□□ -1.59
NEMF-208	ENST00000555970	RPL13A	P40429	203 aa	Known RBP	5.1	□□□□□ -1.59
NEMF-208	ENST00000555970	FOXI1	Q12951	378 aa		5.1	□□□□□ -1.59
NEMF-208	ENST00000555970	LCE2A	Q5TA79	106 aa	Predicted RBP	5.1	□□□□□ -1.59
NEMF-208	ENST00000555970	TEN1	Q86WV5	123 aa		5.1	□□□□□ -1.59
NEMF-208	ENST00000555970	YAE1D1	Q9NRH1	226 aa		5.1	□□□□□ -1.59
NEMF-208	ENST00000555970	CDKN2A-AS1	Q9UH64	79 aa		5.1	□□□□□ -1.59
NEMF-208	ENST00000555970	TRAV8-3	A0A0A6YYJ7	113 aa		5.1	□□□□□ -1.59
NEMF-208	ENST00000555970	COX6A2	Q02221	97 aa		5.1	□□□□□ -1.59
NEMF-208	ENST00000555970	LINC01561	Q8N1V8	128 aa		5.1	□□□□□ -1.59
NEMF-208	ENST00000555970		J3QKU1	62 aa		5.1	□□□□□ -1.59
NEMF-208	ENST00000555970	FHL2	Q14192	279 aa		5.1	□□□□□ -1.59
NEMF-208	ENST00000555970	DEFB121	Q5J5C9	76 aa		5.1	□□□□□ -1.59
NEMF-208	ENST00000555970	CARD19	Q96LW7	228 aa		5.09	□□□□□ -1.59
NEMF-208	ENST00000555970	VPS25	Q9BRG1	176 aa		5.09	□□□□□ -1.59
NEMF-208	ENST00000555970	CSPG4	Q6UVK1	2322 aa		5.09	□□□□□ -1.59
NEMF-208	ENST00000555970	TRGV1	A0A0A0MS02	117 aa		5.09	□□□□□ -1.6
NEMF-208	ENST00000555970	SMIM9	A6NGZ8	99 aa		5.09	□□□□□ -1.6
NEMF-208	ENST00000555970	ACACB	O00763	2458 aa		5.09	□□□□□ -1.6
NEMF-208	ENST00000555970	HERV-K104	P63124	156 aa		5.09	□□□□□ -1.6
NEMF-208	ENST00000555970	DEFB104A	Q8WTQ1	72 aa		5.09	□□□□□ -1.6
NEMF-208	ENST00000555970	MYO18B	Q8IUG5	2567 aa		5.09	□□□□□ -1.6
NEMF-208	ENST00000555970		J3QR89	54 aa		5.08	□□□□□ -1.6
NEMF-208	ENST00000555970	INSL3	P51460	131 aa		5.08	□□□□□ -1.6
NEMF-208	ENST00000555970	KHDC1L	Q5JSQ8	128 aa		5.08	□□□□□ -1.6
NEMF-208	ENST00000555970	ZNF418	Q8TF45	676 aa	Predicted RBP	5.08	□□□□□ -1.6
NEMF-208	ENST00000555970	CDIP1	Q9H305	208 aa		5.08	□□□□□ -1.6
NEMF-208	ENST00000555970	APOM	O95445	188 aa		5.08	□□□□□ -1.6
NEMF-208	ENST00000555970	SPINK8	P0C7L1	97 aa		5.08	□□□□□ -1.6
NEMF-208	ENST00000555970	RNF151	Q2KHN1	245 aa		5.08	□□□□□ -1.6
NEMF-208	ENST00000555970	ETDB	Q3ZM63	59 aa		5.08	□□□□□ -1.6
NEMF-208	ENST00000555970	SHISA2	Q6UWI4	295 aa		5.08	□□□□□ -1.6
NEMF-208	ENST00000555970	SH2D6	Q7Z4S9	175 aa		5.08	□□□□□ -1.6
NEMF-208	ENST00000555970	PPDPFL	Q8WWR9	84 aa		5.08	□□□□□ -1.6
NEMF-208	ENST00000555970	ERG28	Q9UKR5	140 aa		5.08	□□□□□ -1.6
NEMF-208	ENST00000555970	CENPE	Q02224	2701 aa		5.08	□□□□□ -1.6
NEMF-208	ENST00000555970		X6R8D5	127 aa		5.07	□□□□□ -1.6
NEMF-208	ENST00000555970	IGHV3-38	A0A0C4DH36	116 aa		5.07	□□□□□ -1.6
NEMF-208	ENST00000555970	LOC107984156	A0A0G2JMH3	177 aa		5.07	□□□□□ -1.6
NEMF-208	ENST00000555970	GAGE12H	A6NDE8	117 aa		5.07	□□□□□ -1.6
NEMF-208	ENST00000555970	TRIAP1	O43715	76 aa		5.07	□□□□□ -1.6
NEMF-208	ENST00000555970	ARL17A	Q8IVW1	177 aa		5.07	□□□□□ -1.6
NEMF-208	ENST00000555970	COPS9	Q8WXC6	57 aa		5.07	□□□□□ -1.6
NEMF-208	ENST00000555970	TMEM243	Q9BU79	118 aa		5.07	□□□□□ -1.6
NEMF-208	ENST00000555970	TRAV26-1	A0A087WT03	109 aa		5.07	□□□□□ -1.6
NEMF-208	ENST00000555970		A0A1B0GUV1	79 aa		5.07	□□□□□ -1.6
NEMF-208	ENST00000555970	HTN1	P15515	57 aa		5.07	□□□□□ -1.6
NEMF-208	ENST00000555970	FAM222A	Q5U5X8	452 aa		5.07	□□□□□ -1.6
NEMF-208	ENST00000555970	HIST2H2BD	Q6DRA6	164 aa		5.07	□□□□□ -1.6
NEMF-208	ENST00000555970	SFTA2	Q6UW10	78 aa		5.07	□□□□□ -1.6
NEMF-208	ENST00000555970	LINC00308	Q8TCZ7	52 aa		5.07	□□□□□ -1.6
NEMF-208	ENST00000555970	GEMIN7	Q9H840	131 aa	Known RBP	5.07	□□□□□ -1.6
NEMF-208	ENST00000555970	NOP10	Q9NPE3	64 aa	Known RBP	5.07	□□□□□ -1.6
NEMF-208	ENST00000555970	ICOS	Q9Y6W8	199 aa		5.07	□□□□□ -1.6
NEMF-208	ENST00000555970	DNAH3	Q8TD57	4116 aa		5.06	□□□□□ -1.6
NEMF-208	ENST00000555970	TRBV6-8	A0A0A6YYG3	113 aa		5.06	□□□□□ -1.6
NEMF-208	ENST00000555970	LST1	O00453	97 aa		5.06	□□□□□ -1.6
NEMF-208	ENST00000555970	ATXN8	Q156A1	80 aa		5.06	□□□□□ -1.6
NEMF-208	ENST00000555970	RNASE13	Q5GAN3	156 aa	Known RBP	5.06	□□□□□ -1.6
NEMF-208	ENST00000555970	SETX	Q7Z333	2677 aa	Known RBP	5.06	□□□□□ -1.6
NEMF-208	ENST00000555970	IGHV3OR16-9	A0A0B4J2B5	98 aa		5.06	□□□□□ -1.6
NEMF-208	ENST00000555970	TRBV10-2	A0A0K0K1G8	114 aa		5.06	□□□□□ -1.6
NEMF-208	ENST00000555970		H3BT86	120 aa		5.06	□□□□□ -1.6
NEMF-208	ENST00000555970	PSMB2	P49721	201 aa		5.06	□□□□□ -1.6
NEMF-208	ENST00000555970		A0A1W2PRX2	142 aa		5.05	□□□□□ -1.6
NEMF-208	ENST00000555970	LINC01620	Q4KN68	170 aa		5.05	□□□□□ -1.6
NEMF-208	ENST00000555970	SOSTDC1	Q6X4U4	206 aa		5.05	□□□□□ -1.6
NEMF-208	ENST00000555970	WFDC10A	Q9H1F0	79 aa		5.05	□□□□□ -1.6
NEMF-208	ENST00000555970	IGHV3-64	A0A075B6Q5	118 aa		5.05	□□□□□ -1.6
NEMF-208	ENST00000555970		A0A087WZ39	114 aa		5.05	□□□□□ -1.6
NEMF-208	ENST00000555970		A8MZ25	164 aa		5.05	□□□□□ -1.6
NEMF-208	ENST00000555970	SLC25A20	O43772	301 aa		5.05	□□□□□ -1.6
NEMF-208	ENST00000555970	PF4	P02776	101 aa		5.05	□□□□□ -1.6
NEMF-208	ENST00000555970	HIST2H2BC	Q6DN03	193 aa		5.05	□□□□□ -1.6
NEMF-208	ENST00000555970	ANKRD29	Q8N6D5	301 aa		5.05	□□□□□ -1.6
NEMF-208	ENST00000555970	LRRK2	Q5S007	2527 aa		5.04	□□□□□ -1.6
NEMF-208	ENST00000555970	SIGMAR1	Q99720	223 aa		5.04	□□□□□ -1.6
NEMF-208	ENST00000555970	PTPN13	Q12923	2485 aa		5.04	□□□□□ -1.6
NEMF-208	ENST00000555970	SPG11	Q96JI7	2443 aa		5.04	□□□□□ -1.6
NEMF-208	ENST00000555970	FAM240A	A0A1B0GVK7	77 aa		5.04	□□□□□ -1.6
NEMF-208	ENST00000555970	LYRM9	A8MSI8	78 aa		5.04	□□□□□ -1.6
NEMF-208	ENST00000555970	CITED1	Q99966	193 aa		5.04	□□□□□ -1.6
NEMF-208	ENST00000555970	CHD6	Q8TD26	2715 aa		5.04	□□□□□ -1.6
NEMF-208	ENST00000555970		Q9H8V8	135 aa		5.03	□□□□□ -1.6
NEMF-208	ENST00000555970	POLQ	O75417	2590 aa		5.03	□□□□□ -1.6
NEMF-208	ENST00000555970	NAV2	Q8IVL1	2488 aa		5.03	□□□□□ -1.6
NEMF-208	ENST00000555970	LOC100131303	A0A0U1RQF7	123 aa		5.03	□□□□□ -1.6
NEMF-208	ENST00000555970	GAGE12J	A6NER3	117 aa		5.03	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms