RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 SBSPONQ8IVN8 264 aa12.96□□□□□ -0.33
GABRB3-209ENST00000555632 ORAOV1Q8WV07 137 aa12.96□□□□□ -0.33
GABRB3-209ENST00000555632 DNAH3Q8TD57 4116 aa12.96□□□□□ -0.33
GABRB3-209ENST00000555632 TMEM223A0PJW6 202 aa12.95□□□□□ -0.34
GABRB3-209ENST00000555632 ZNF815PA8K554 130 aa12.95□□□□□ -0.34
GABRB3-209ENST00000555632 MRPS36P82909 103 aaKnown RBP12.95□□□□□ -0.34
GABRB3-209ENST00000555632 PLEKHB2Q96CS7 222 aa12.95□□□□□ -0.34
GABRB3-209ENST00000555632 CRYBA4P53673 196 aa12.95□□□□□ -0.34
GABRB3-209ENST00000555632 GCSHP23434 173 aa12.94□□□□□ -0.34
GABRB3-209ENST00000555632 FXYD2P54710 66 aa12.94□□□□□ -0.34
GABRB3-209ENST00000555632 HERVK_113P61574 105 aa12.94□□□□□ -0.34
GABRB3-209ENST00000555632 Q8NAQ8 132 aa12.94□□□□□ -0.34
GABRB3-209ENST00000555632 CELA1Q9UNI1 258 aa12.94□□□□□ -0.34
GABRB3-209ENST00000555632 COX11Q9Y6N1 276 aa12.94□□□□□ -0.34
GABRB3-209ENST00000555632 NPSP0C0P6 89 aa12.94□□□□□ -0.34
GABRB3-209ENST00000555632 DGAT2L7PQ6IED9 249 aa12.94□□□□□ -0.34
GABRB3-209ENST00000555632 SHISA2Q6UWI4 295 aa12.94□□□□□ -0.34
GABRB3-209ENST00000555632 NOTCH1P46531 2555 aa12.94□□□□□ -0.34
GABRB3-209ENST00000555632 SEC11AP67812 179 aa12.92□□□□□ -0.34
GABRB3-209ENST00000555632 GTSF1LQ9H1H1 148 aa12.92□□□□□ -0.34
GABRB3-209ENST00000555632 RNF183Q96D59 192 aa12.92□□□□□ -0.34
GABRB3-209ENST00000555632 TIMM21Q9BVV7 248 aa12.92□□□□□ -0.34
GABRB3-209ENST00000555632 UBE2D1P51668 147 aa12.91□□□□□ -0.34
GABRB3-209ENST00000555632 TRAV8-3A0A0A6YYJ7 113 aa12.91□□□□□ -0.34
GABRB3-209ENST00000555632 LYRM9A8MSI8 78 aa12.91□□□□□ -0.34
GABRB3-209ENST00000555632 J3QQQ9 107 aa12.91□□□□□ -0.34
GABRB3-209ENST00000555632 GYPEP15421 78 aa12.9□□□□□ -0.34
GABRB3-209ENST00000555632 CEND1Q8N111 149 aa12.9□□□□□ -0.34
GABRB3-209ENST00000555632 TINCRA0A1B0GVN0 87 aa12.89□□□□□ -0.35
GABRB3-209ENST00000555632 COX6A2Q02221 97 aa12.89□□□□□ -0.35
GABRB3-209ENST00000555632 TMEM243Q9BU79 118 aa12.89□□□□□ -0.35
GABRB3-209ENST00000555632 EGFEM1PQ0D2K5 195 aa12.89□□□□□ -0.35
GABRB3-209ENST00000555632 SCGB1D4Q6XE38 83 aa12.89□□□□□ -0.35
GABRB3-209ENST00000555632 HIST1H4GQ99525 98 aa12.89□□□□□ -0.35
GABRB3-209ENST00000555632 CDC42SE2Q9NRR3 84 aa12.89□□□□□ -0.35
GABRB3-209ENST00000555632 A0A096LPF7 62 aa12.88□□□□□ -0.35
GABRB3-209ENST00000555632 TRBV6-8A0A0A6YYG3 113 aa12.88□□□□□ -0.35
GABRB3-209ENST00000555632 A8MZ25 164 aa12.88□□□□□ -0.35
GABRB3-209ENST00000555632 G3V4G9 280 aa12.88□□□□□ -0.35
GABRB3-209ENST00000555632 MIFP14174 115 aa12.88□□□□□ -0.35
GABRB3-209ENST00000555632 CSDC2Q9Y534 153 aaKnown RBP12.88□□□□□ -0.35
GABRB3-209ENST00000555632 LEPROTO15243 131 aa12.88□□□□□ -0.35
GABRB3-209ENST00000555632 TM2D2Q9BX73 214 aa12.88□□□□□ -0.35
GABRB3-209ENST00000555632 PRO0255Q9UI72 69 aa12.88□□□□□ -0.35
GABRB3-209ENST00000555632 UBE2L6O14933 153 aa12.87□□□□□ -0.35
GABRB3-209ENST00000555632 IGHV3-30-3P0DP02 117 aa12.87□□□□□ -0.35
GABRB3-209ENST00000555632 GAGE6Q13070 117 aa12.87□□□□□ -0.35
GABRB3-209ENST00000555632 LINC00469Q8N7U9 141 aa12.87□□□□□ -0.35
GABRB3-209ENST00000555632 RETNQ9HD89 108 aa12.87□□□□□ -0.35
GABRB3-209ENST00000555632 CDKN2A-AS1Q9UH64 79 aa12.87□□□□□ -0.35
GABRB3-209ENST00000555632 NBEAL1Q6ZS30 2694 aa12.87□□□□□ -0.35
GABRB3-209ENST00000555632 TENM3Q9P273 2699 aa12.87□□□□□ -0.35
GABRB3-209ENST00000555632 TRAV13-1A0A0B4J241 112 aa12.86□□□□□ -0.35
GABRB3-209ENST00000555632 A0A0J9YY99 117 aa12.86□□□□□ -0.35
GABRB3-209ENST00000555632 A6NDN8 102 aa12.86□□□□□ -0.35
GABRB3-209ENST00000555632 K7ERJ3 54 aa12.86□□□□□ -0.35
GABRB3-209ENST00000555632 SPINK8P0C7L1 97 aa12.86□□□□□ -0.35
GABRB3-209ENST00000555632 LGALS3P17931 250 aaKnown RBP12.86□□□□□ -0.35
GABRB3-209ENST00000555632 RAB37Q96AX2 223 aa12.86□□□□□ -0.35
GABRB3-209ENST00000555632 NAA38Q9BRA0 125 aaKnown RBP12.86□□□□□ -0.35
GABRB3-209ENST00000555632 DAD1P61803 113 aa12.86□□□□□ -0.35
GABRB3-209ENST00000555632 LINC00242Q5T6M2 205 aa12.86□□□□□ -0.35
GABRB3-209ENST00000555632 AMMECR1LQ6DCA0 310 aa12.86□□□□□ -0.35
GABRB3-209ENST00000555632 OR5A1Q8NGJ0 315 aa12.86□□□□□ -0.35
GABRB3-209ENST00000555632 PTTG1IPP53801 180 aa12.85□□□□□ -0.35
GABRB3-209ENST00000555632 VSIG2Q96IQ7 327 aa12.85□□□□□ -0.35
GABRB3-209ENST00000555632 GEMIN7Q9H840 131 aaKnown RBP12.85□□□□□ -0.35
GABRB3-209ENST00000555632 IGLV4-60A0A075B6I1 120 aa12.85□□□□□ -0.35
GABRB3-209ENST00000555632 ATP6V0E2Q8NHE4 81 aa12.85□□□□□ -0.35
GABRB3-209ENST00000555632 PAX4O43316 350 aa12.84□□□□□ -0.35
GABRB3-209ENST00000555632 NHP2Q9NX24 153 aaKnown RBP12.84□□□□□ -0.35
GABRB3-209ENST00000555632 TAL2Q16559 108 aa12.83□□□□□ -0.35
GABRB3-209ENST00000555632 CHCHD5Q9BSY4 110 aa12.83□□□□□ -0.35
GABRB3-209ENST00000555632 IGHV1-58A0A0C4DH39 117 aa12.83□□□□□ -0.36
GABRB3-209ENST00000555632 C10orf126Q8N4M7 172 aa12.83□□□□□ -0.36
GABRB3-209ENST00000555632 H3BRM9 83 aa12.82□□□□□ -0.36
GABRB3-209ENST00000555632 IGLV5-45A0A087WSX0 123 aa12.82□□□□□ -0.36
GABRB3-209ENST00000555632 TIRAPP58753 221 aa12.82□□□□□ -0.36
GABRB3-209ENST00000555632 TRAV26-1A0A087WT03 109 aa12.81□□□□□ -0.36
GABRB3-209ENST00000555632 SPART-AS1P0CW21 52 aa12.81□□□□□ -0.36
GABRB3-209ENST00000555632 TMEM101Q96IK0 257 aa12.81□□□□□ -0.36
GABRB3-209ENST00000555632 HTN3P15516 51 aa12.8□□□□□ -0.36
GABRB3-209ENST00000555632 SRSF9Q13242 221 aaKnown RBP eCLIP12.8□□□□□ -0.36
GABRB3-209ENST00000555632 VAMP3Q15836 100 aa12.8□□□□□ -0.36
GABRB3-209ENST00000555632 IGKV3OR2-268A0A0C4DH90 116 aa12.8□□□□□ -0.36
GABRB3-209ENST00000555632 F5H768 121 aa12.8□□□□□ -0.36
GABRB3-209ENST00000555632 H7C423 109 aa12.8□□□□□ -0.36
GABRB3-209ENST00000555632 ATP5G1P05496 136 aa12.8□□□□□ -0.36
GABRB3-209ENST00000555632 H3BUT2 72 aa12.79□□□□□ -0.36
GABRB3-209ENST00000555632 SMIM13P0DJ93 91 aa12.79□□□□□ -0.36
GABRB3-209ENST00000555632 C9orf118A6NHY6 69 aa12.79□□□□□ -0.36
GABRB3-209ENST00000555632 CCL25O15444 150 aa12.79□□□□□ -0.36
GABRB3-209ENST00000555632 HERVK_113P63121 156 aa12.79□□□□□ -0.36
GABRB3-209ENST00000555632 FAM19A3Q7Z5A8 133 aa12.79□□□□□ -0.36
GABRB3-209ENST00000555632 PRB2P02812 416 aaPredicted RBP12.78□□□□□ -0.36
GABRB3-209ENST00000555632 A0A0J9YXY3 114 aa12.77□□□□□ -0.37
GABRB3-209ENST00000555632 SMAGPQ0VAQ4 97 aa12.77□□□□□ -0.37
GABRB3-209ENST00000555632 C12orf74Q32Q52 190 aa12.77□□□□□ -0.37
GABRB3-209ENST00000555632 IGHV3-30P01768 117 aa12.76□□□□□ -0.37
GABRB3-209ENST00000555632 IGHV3-30-5P0DP03 117 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms