RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 RPL36AP83881 106 aaKnown RBP17.29■□□□□ 0.36
TMEM260-207ENST00000555497 RPL36ALQ969Q0 106 aaKnown RBP17.29■□□□□ 0.36
TMEM260-207ENST00000555497 OVOL2Q9BRP0 275 aa17.29■□□□□ 0.36
TMEM260-207ENST00000555497 GAGE12JA6NER3 117 aa17.28■□□□□ 0.36
TMEM260-207ENST00000555497 LINC00694P0DN24 101 aa17.28■□□□□ 0.36
TMEM260-207ENST00000555497 RPL24P83731 157 aaKnown RBP17.28■□□□□ 0.36
TMEM260-207ENST00000555497 GAGE4Q13068 117 aa17.28■□□□□ 0.36
TMEM260-207ENST00000555497 GAGE5Q13069 117 aa17.28■□□□□ 0.36
TMEM260-207ENST00000555497 GAGE13Q4V321 117 aa17.28■□□□□ 0.36
TMEM260-207ENST00000555497 TENM1Q9UKZ4 2725 aa17.27■□□□□ 0.36
TMEM260-207ENST00000555497 TEX48A0A1B0GUV7 120 aa17.27■□□□□ 0.36
TMEM260-207ENST00000555497 UBE2D3P61077 147 aa17.27■□□□□ 0.36
TMEM260-207ENST00000555497 UBE2D2P62837 147 aa17.27■□□□□ 0.36
TMEM260-207ENST00000555497 TRGV2A0A075B6R0 118 aa17.27■□□□□ 0.35
TMEM260-207ENST00000555497 TRAV8-3A0A0A6YYJ7 113 aa17.26■□□□□ 0.35
TMEM260-207ENST00000555497 SPANXB1Q9NS25 103 aaPredicted RBP17.26■□□□□ 0.35
TMEM260-207ENST00000555497 TINCRA0A1B0GVN0 87 aa17.25■□□□□ 0.35
TMEM260-207ENST00000555497 IGHV3-30-3P0DP02 117 aa17.25■□□□□ 0.35
TMEM260-207ENST00000555497 LOC100131303A0A0U1RQF7 123 aa17.25■□□□□ 0.35
TMEM260-207ENST00000555497 IGHV3-30P01768 117 aa17.24■□□□□ 0.35
TMEM260-207ENST00000555497 IGHV3-30-5P0DP03 117 aa17.24■□□□□ 0.35
TMEM260-207ENST00000555497 UBE2D1P51668 147 aa17.24■□□□□ 0.35
TMEM260-207ENST00000555497 DAZ4Q86SG3 579 aaKnown RBP17.24■□□□□ 0.35
TMEM260-207ENST00000555497 TIMM21Q9BVV7 248 aa17.24■□□□□ 0.35
TMEM260-207ENST00000555497 DAZ3Q9NR90 486 aaKnown RBP17.24■□□□□ 0.35
TMEM260-207ENST00000555497 F8W1H4 67 aa17.23■□□□□ 0.35
TMEM260-207ENST00000555497 C10orf126Q8N4M7 172 aa17.23■□□□□ 0.35
TMEM260-207ENST00000555497 SBSPONQ8IVN8 264 aa17.22■□□□□ 0.35
TMEM260-207ENST00000555497 DGAT2L7PQ6IED9 249 aa17.21■□□□□ 0.35
TMEM260-207ENST00000555497 A8MZ25 164 aa17.2■□□□□ 0.34
TMEM260-207ENST00000555497 CRLF1O75462 422 aa17.2■□□□□ 0.34
TMEM260-207ENST00000555497 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.2■□□□□ 0.34
TMEM260-207ENST00000555497 IGHV1-58A0A0C4DH39 117 aa17.2■□□□□ 0.34
TMEM260-207ENST00000555497 SPINK8P0C7L1 97 aa17.2■□□□□ 0.34
TMEM260-207ENST00000555497 TMEM238LA0A1B0GVL6 79 aa17.19■□□□□ 0.34
TMEM260-207ENST00000555497 A6NJY4 79 aa17.19■□□□□ 0.34
TMEM260-207ENST00000555497 COX6A2Q02221 97 aa17.19■□□□□ 0.34
TMEM260-207ENST00000555497 FHL2Q14192 279 aa17.19■□□□□ 0.34
TMEM260-207ENST00000555497 TRBV6-4A0A1B0GX49 114 aa17.18■□□□□ 0.34
TMEM260-207ENST00000555497 VSIG2Q96IQ7 327 aa17.18■□□□□ 0.34
TMEM260-207ENST00000555497 CDKN2A-AS1Q9UH64 79 aa17.18■□□□□ 0.34
TMEM260-207ENST00000555497 TRGV4A0A0C4DH28 118 aa17.17■□□□□ 0.34
TMEM260-207ENST00000555497 A0A0J9YXY3 114 aa17.17■□□□□ 0.34
TMEM260-207ENST00000555497 WFDC2Q14508 124 aa17.17■□□□□ 0.34
TMEM260-207ENST00000555497 GEMIN7Q9H840 131 aaKnown RBP17.17■□□□□ 0.34
TMEM260-207ENST00000555497 APOMO95445 188 aa17.17■□□□□ 0.34
TMEM260-207ENST00000555497 INSL3P51460 131 aa17.17■□□□□ 0.34
TMEM260-207ENST00000555497 C9orf66Q5T8R8 295 aa17.17■□□□□ 0.34
TMEM260-207ENST00000555497 PGPEP1Q9NXJ5 209 aa17.17■□□□□ 0.34
TMEM260-207ENST00000555497 SCGB1A1P11684 91 aa17.15■□□□□ 0.34
TMEM260-207ENST00000555497 TIRAPP58753 221 aa17.15■□□□□ 0.34
TMEM260-207ENST00000555497 CSDC2Q9Y534 153 aaKnown RBP17.15■□□□□ 0.34
TMEM260-207ENST00000555497 IGLV5-45A0A087WSX0 123 aa17.15■□□□□ 0.34
TMEM260-207ENST00000555497 CIDEAO60543 219 aa17.15■□□□□ 0.34
TMEM260-207ENST00000555497 CFC1BP0CG36 223 aa17.15■□□□□ 0.34
TMEM260-207ENST00000555497 CFC1P0CG37 223 aa17.15■□□□□ 0.34
TMEM260-207ENST00000555497 ATRQ13535 2644 aa17.15■□□□□ 0.34
TMEM260-207ENST00000555497 SIGMAR1Q99720 223 aa17.15■□□□□ 0.34
TMEM260-207ENST00000555497 X6R8D5 127 aa17.15■□□□□ 0.34
TMEM260-207ENST00000555497 NBEAL2Q6ZNJ1 2754 aa17.14■□□□□ 0.33
TMEM260-207ENST00000555497 H3BMG7 143 aa17.14■□□□□ 0.33
TMEM260-207ENST00000555497 J3QR89 54 aa17.14■□□□□ 0.33
TMEM260-207ENST00000555497 LINC00242Q5T6M2 205 aa17.14■□□□□ 0.33
TMEM260-207ENST00000555497 CITED1Q99966 193 aa17.14■□□□□ 0.33
TMEM260-207ENST00000555497 GTSF1LQ9H1H1 148 aa17.14■□□□□ 0.33
TMEM260-207ENST00000555497 DEFB130BP0DP73 79 aa17.13■□□□□ 0.33
TMEM260-207ENST00000555497 DEFB130AP0DP74 79 aa17.13■□□□□ 0.33
TMEM260-207ENST00000555497 LITAFQ99732 161 aa17.13■□□□□ 0.33
TMEM260-207ENST00000555497 CDC42SE2Q9NRR3 84 aa17.13■□□□□ 0.33
TMEM260-207ENST00000555497 TSPAN13O95857 204 aa17.12■□□□□ 0.33
TMEM260-207ENST00000555497 NDUFA12Q9UI09 145 aa17.12■□□□□ 0.33
TMEM260-207ENST00000555497 EIF4EBP3O60516 100 aaPredicted RBP17.12■□□□□ 0.33
TMEM260-207ENST00000555497 MUSTN1Q8IVN3 82 aa17.12■□□□□ 0.33
TMEM260-207ENST00000555497 TMEM243Q9BU79 118 aa17.12■□□□□ 0.33
TMEM260-207ENST00000555497 TEP1Q99973 2627 aaKnown RBP17.11■□□□□ 0.33
TMEM260-207ENST00000555497 GAGE12HA6NDE8 117 aa17.11■□□□□ 0.33
TMEM260-207ENST00000555497 LINC00612Q8N6U2 182 aa17.11■□□□□ 0.33
TMEM260-207ENST00000555497 TRAV13-1A0A0B4J241 112 aa17.1■□□□□ 0.33
TMEM260-207ENST00000555497 A4D1N5 150 aa17.1■□□□□ 0.33
TMEM260-207ENST00000555497 KIR2DL5BQ8NHK3 375 aa17.1■□□□□ 0.33
TMEM260-207ENST00000555497 TMEM101Q96IK0 257 aa17.1■□□□□ 0.33
TMEM260-207ENST00000555497 PRO0461Q9UI25 63 aa17.1■□□□□ 0.33
TMEM260-207ENST00000555497 ETDBQ3ZM63 59 aa17.09■□□□□ 0.33
TMEM260-207ENST00000555497 ADAMTSL4-AS1Q5T5F5 129 aa17.09■□□□□ 0.33
TMEM260-207ENST00000555497 SFTA2Q6UW10 78 aa17.09■□□□□ 0.33
TMEM260-207ENST00000555497 SH2D6Q7Z4S9 175 aa17.09■□□□□ 0.33
TMEM260-207ENST00000555497 FAM19A3Q7Z5A8 133 aa17.09■□□□□ 0.33
TMEM260-207ENST00000555497 SPATA25Q9BR10 227 aa17.09■□□□□ 0.33
TMEM260-207ENST00000555497 ZFAND6Q6FIF0 208 aa17.08■□□□□ 0.32
TMEM260-207ENST00000555497 HERVK_113P63121 156 aa17.07■□□□□ 0.32
TMEM260-207ENST00000555497 UBE2L6O14933 153 aa17.06■□□□□ 0.32
TMEM260-207ENST00000555497 SMAGPQ0VAQ4 97 aa17.06■□□□□ 0.32
TMEM260-207ENST00000555497 TRRAPQ9Y4A5 3859 aa17.04■□□□□ 0.32
TMEM260-207ENST00000555497 IGLV5-39A0A0G2JS06 123 aa17.04■□□□□ 0.32
TMEM260-207ENST00000555497 GAGE6Q13070 117 aa17.04■□□□□ 0.32
TMEM260-207ENST00000555497 PRO1854Q9UHT4 67 aa17.04■□□□□ 0.32
TMEM260-207ENST00000555497 TRBV6-8A0A0A6YYG3 113 aa17.03■□□□□ 0.32
TMEM260-207ENST00000555497 SMIM9A6NGZ8 99 aa17.03■□□□□ 0.32
TMEM260-207ENST00000555497 DEFB135Q30KP9 77 aa17.03■□□□□ 0.32
TMEM260-207ENST00000555497 SMIM1B2RUZ4 78 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms