RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 SNCGO76070 127 aa6.94□□□□□ -1.3
SYNE2-213ENST00000554805 ZFAND6Q6FIF0 208 aa6.94□□□□□ -1.3
SYNE2-213ENST00000554805 ZNF702PQ9H963 129 aa6.94□□□□□ -1.3
SYNE2-213ENST00000554805 PEMTQ9UBM1 199 aa6.94□□□□□ -1.3
SYNE2-213ENST00000554805 PYGO1Q9Y3Y4 419 aa6.94□□□□□ -1.3
SYNE2-213ENST00000554805 TRAV26-1A0A087WT03 109 aa6.93□□□□□ -1.3
SYNE2-213ENST00000554805 MRPS36P82909 103 aaKnown RBP6.93□□□□□ -1.3
SYNE2-213ENST00000554805 ANAPC13Q9BS18 74 aa6.93□□□□□ -1.3
SYNE2-213ENST00000554805 SPANXA1Q9NS26 97 aa6.93□□□□□ -1.3
SYNE2-213ENST00000554805 TRAV8-4A0A0B4J246 113 aa6.93□□□□□ -1.3
SYNE2-213ENST00000554805 RBMY1BA6NDE4 496 aaKnown RBP6.93□□□□□ -1.3
SYNE2-213ENST00000554805 RBMY1EA6NEQ0 496 aaKnown RBP6.93□□□□□ -1.3
SYNE2-213ENST00000554805 RBMY1DP0C7P1 496 aaKnown RBP6.93□□□□□ -1.3
SYNE2-213ENST00000554805 SHISA2Q6UWI4 295 aa6.93□□□□□ -1.3
SYNE2-213ENST00000554805 ICOSQ9Y6W8 199 aa6.93□□□□□ -1.3
SYNE2-213ENST00000554805 TRGV1A0A0A0MS02 117 aa6.93□□□□□ -1.3
SYNE2-213ENST00000554805 TEX49A0A1B0GTD5 131 aa6.93□□□□□ -1.3
SYNE2-213ENST00000554805 A0A1W2PRX2 142 aa6.93□□□□□ -1.3
SYNE2-213ENST00000554805 RPL13AP40429 203 aaKnown RBP6.93□□□□□ -1.3
SYNE2-213ENST00000554805 SBSPONQ8IVN8 264 aa6.93□□□□□ -1.3
SYNE2-213ENST00000554805 CLEC2BQ92478 149 aa6.93□□□□□ -1.3
SYNE2-213ENST00000554805 VSIG2Q96IQ7 327 aa6.93□□□□□ -1.3
SYNE2-213ENST00000554805 CDKN2A-AS1Q9UH64 79 aa6.93□□□□□ -1.3
SYNE2-213ENST00000554805 INSP01308 110 aa6.92□□□□□ -1.3
SYNE2-213ENST00000554805 CIRBPQ14011 172 aaKnown RBP6.92□□□□□ -1.3
SYNE2-213ENST00000554805 YAE1D1Q9NRH1 226 aa6.92□□□□□ -1.3
SYNE2-213ENST00000554805 TRAV13-1A0A0B4J241 112 aa6.92□□□□□ -1.3
SYNE2-213ENST00000554805 TINCRA0A1B0GVN0 87 aa6.92□□□□□ -1.3
SYNE2-213ENST00000554805 J3QLI3 93 aa6.92□□□□□ -1.3
SYNE2-213ENST00000554805 CHCHD7Q9BUK0 85 aa6.92□□□□□ -1.3
SYNE2-213ENST00000554805 UBE2D4Q9Y2X8 147 aa6.92□□□□□ -1.3
SYNE2-213ENST00000554805 GAGE2BQ13066 116 aa6.92□□□□□ -1.3
SYNE2-213ENST00000554805 MIAQ16674 131 aa6.92□□□□□ -1.3
SYNE2-213ENST00000554805 GAGE2EQ4V326 116 aa6.92□□□□□ -1.3
SYNE2-213ENST00000554805 UBE2WQ96B02 151 aa6.92□□□□□ -1.3
SYNE2-213ENST00000554805 Q96MF0 132 aa6.92□□□□□ -1.3
SYNE2-213ENST00000554805 GAGE2DQ9UEU5 116 aa6.92□□□□□ -1.3
SYNE2-213ENST00000554805 UBR5O95071 2799 aaPredicted RBP6.92□□□□□ -1.3
SYNE2-213ENST00000554805 MEIG1Q5JSS6 88 aa6.91□□□□□ -1.3
SYNE2-213ENST00000554805 MAP6D1Q9H9H5 199 aa6.91□□□□□ -1.3
SYNE2-213ENST00000554805 TRBV10-2A0A0K0K1G8 114 aa6.91□□□□□ -1.3
SYNE2-213ENST00000554805 Q6YL49 198 aa6.91□□□□□ -1.3
SYNE2-213ENST00000554805 RNF183Q96D59 192 aa6.91□□□□□ -1.3
SYNE2-213ENST00000554805 TRBV30A0A0K0K1B3 111 aa6.91□□□□□ -1.3
SYNE2-213ENST00000554805 STHQ8IWL8 128 aa6.9□□□□□ -1.3
SYNE2-213ENST00000554805 TTC32Q5I0X7 151 aa6.9□□□□□ -1.31
SYNE2-213ENST00000554805 Q9H8V8 135 aa6.9□□□□□ -1.31
SYNE2-213ENST00000554805 LITAFQ99732 161 aa6.89□□□□□ -1.31
SYNE2-213ENST00000554805 IGKV3OR2-268A0A0C4DH90 116 aa6.89□□□□□ -1.31
SYNE2-213ENST00000554805 FAM104AQ969W3 186 aa6.89□□□□□ -1.31
SYNE2-213ENST00000554805 GAGE12JA6NER3 117 aa6.89□□□□□ -1.31
SYNE2-213ENST00000554805 GAGE4Q13068 117 aa6.89□□□□□ -1.31
SYNE2-213ENST00000554805 GAGE5Q13069 117 aa6.89□□□□□ -1.31
SYNE2-213ENST00000554805 SPANXDQ9BXN6 97 aa6.89□□□□□ -1.31
SYNE2-213ENST00000554805 SPANXCQ9NY87 97 aa6.89□□□□□ -1.31
SYNE2-213ENST00000554805 J3QKU1 62 aa6.88□□□□□ -1.31
SYNE2-213ENST00000554805 C15orf53Q8NAA6 179 aa6.88□□□□□ -1.31
SYNE2-213ENST00000554805 TMEM101Q96IK0 257 aa6.88□□□□□ -1.31
SYNE2-213ENST00000554805 DNAJC30Q96LL9 226 aa6.88□□□□□ -1.31
SYNE2-213ENST00000554805 NDUFA7O95182 113 aa6.88□□□□□ -1.31
SYNE2-213ENST00000554805 RPL36AP83881 106 aaKnown RBP6.88□□□□□ -1.31
SYNE2-213ENST00000554805 WFDC11Q8NEX6 87 aa6.88□□□□□ -1.31
SYNE2-213ENST00000554805 RPL36ALQ969Q0 106 aaKnown RBP6.88□□□□□ -1.31
SYNE2-213ENST00000554805 ZNF469Q96JG9 3925 aaPredicted RBP6.88□□□□□ -1.31
SYNE2-213ENST00000554805 IGHV4-31P0DP07 118 aa6.88□□□□□ -1.31
SYNE2-213ENST00000554805 COX6A2Q02221 97 aa6.88□□□□□ -1.31
SYNE2-213ENST00000554805 DEFB114Q30KQ6 69 aa6.88□□□□□ -1.31
SYNE2-213ENST00000554805 PRIMA1Q86XR5 153 aa6.88□□□□□ -1.31
SYNE2-213ENST00000554805 TRAV4A0A0B4J268 109 aa6.87□□□□□ -1.31
SYNE2-213ENST00000554805 H7C423 109 aa6.87□□□□□ -1.31
SYNE2-213ENST00000554805 IFITM1P13164 125 aa6.87□□□□□ -1.31
SYNE2-213ENST00000554805 UBE2L6O14933 153 aa6.86□□□□□ -1.31
SYNE2-213ENST00000554805 RS1O15537 224 aa6.86□□□□□ -1.31
SYNE2-213ENST00000554805 CRLF1O75462 422 aa6.86□□□□□ -1.31
SYNE2-213ENST00000554805 HERVK_113P63121 156 aa6.86□□□□□ -1.31
SYNE2-213ENST00000554805 C11orf72Q8NBR9 251 aa6.86□□□□□ -1.31
SYNE2-213ENST00000554805 EDA2RQ9HAV5 297 aa6.86□□□□□ -1.31
SYNE2-213ENST00000554805 TOMM7Q9P0U1 55 aa6.86□□□□□ -1.31
SYNE2-213ENST00000554805 LINC00694P0DN24 101 aa6.85□□□□□ -1.31
SYNE2-213ENST00000554805 TIRAPP58753 221 aa6.85□□□□□ -1.31
SYNE2-213ENST00000554805 Q6ZTI0 123 aa6.85□□□□□ -1.31
SYNE2-213ENST00000554805 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.85□□□□□ -1.31
SYNE2-213ENST00000554805 RNF152Q8N8N0 203 aa6.85□□□□□ -1.31
SYNE2-213ENST00000554805 C4orf3Q8WVX3 66 aa6.85□□□□□ -1.31
SYNE2-213ENST00000554805 NDUFA1O15239 70 aa6.85□□□□□ -1.31
SYNE2-213ENST00000554805 LINC00308Q8TCZ7 52 aa6.85□□□□□ -1.31
SYNE2-213ENST00000554805 TRGV2A0A075B6R0 118 aa6.85□□□□□ -1.31
SYNE2-213ENST00000554805 H3BT86 120 aa6.85□□□□□ -1.31
SYNE2-213ENST00000554805 NOP10Q9NPE3 64 aaKnown RBP6.85□□□□□ -1.31
SYNE2-213ENST00000554805 LINC00242Q5T6M2 205 aa6.84□□□□□ -1.31
SYNE2-213ENST00000554805 A0A096LNT2 108 aa6.84□□□□□ -1.31
SYNE2-213ENST00000554805 LST1O00453 97 aa6.84□□□□□ -1.31
SYNE2-213ENST00000554805 BEAN1Q3B7T3 259 aa6.84□□□□□ -1.31
SYNE2-213ENST00000554805 PIK3CD-AS1Q5SR53 167 aa6.84□□□□□ -1.31
SYNE2-213ENST00000554805 B5MCH6 92 aa6.84□□□□□ -1.32
SYNE2-213ENST00000554805 RPL35AP18077 110 aaKnown RBP6.84□□□□□ -1.32
SYNE2-213ENST00000554805 DEFB113Q30KQ7 82 aa6.84□□□□□ -1.32
SYNE2-213ENST00000554805 ODF3L2Q3SX64 289 aa6.84□□□□□ -1.32
SYNE2-213ENST00000554805 F8P00451 2351 aa6.83□□□□□ -1.32
SYNE2-213ENST00000554805 ATRQ13535 2644 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms