RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ST20Q9HBF5 79 aa1.84□□□□□ -2.11
SCFD1-211ENST00000554437 SORL1Q92673 2214 aa1.84□□□□□ -2.11
SCFD1-211ENST00000554437 MAP3K1Q13233 1512 aa1.84□□□□□ -2.11
SCFD1-211ENST00000554437 TANC1Q9C0D5 1861 aa1.84□□□□□ -2.12
SCFD1-211ENST00000554437 CASP8AP2Q9UKL3 1982 aa1.83□□□□□ -2.12
SCFD1-211ENST00000554437 DOCK2Q92608 1830 aa1.83□□□□□ -2.12
SCFD1-211ENST00000554437 NCR3O14931 201 aa1.83□□□□□ -2.12
SCFD1-211ENST00000554437 SNRNP200O75643 2136 aaKnown RBP1.83□□□□□ -2.12
SCFD1-211ENST00000554437 SAA2P0DJI9 122 aaPredicted RBP1.83□□□□□ -2.12
SCFD1-211ENST00000554437 ETDBQ3ZM63 59 aa1.83□□□□□ -2.12
SCFD1-211ENST00000554437 BAGE3Q86Y29 109 aa1.83□□□□□ -2.12
SCFD1-211ENST00000554437 FAM223AQ8IWN6 122 aa1.83□□□□□ -2.12
SCFD1-211ENST00000554437 DIP2CQ9Y2E4 1556 aa1.83□□□□□ -2.12
SCFD1-211ENST00000554437 EXPH5Q8NEV8 1989 aa1.83□□□□□ -2.12
SCFD1-211ENST00000554437 MUC6Q6W4X9 2439 aa1.82□□□□□ -2.12
SCFD1-211ENST00000554437 MED13Q9UHV7 2174 aa1.82□□□□□ -2.12
SCFD1-211ENST00000554437 EHBP1L1Q8N3D4 1523 aa1.82□□□□□ -2.12
SCFD1-211ENST00000554437 SPAG17Q6Q759 2223 aa1.82□□□□□ -2.12
SCFD1-211ENST00000554437 CTXND1A0A1B0GTU2 59 aa1.82□□□□□ -2.12
SCFD1-211ENST00000554437 ZNF815PA8K554 130 aa1.82□□□□□ -2.12
SCFD1-211ENST00000554437 PSMG4Q5JS54 123 aa1.82□□□□□ -2.12
SCFD1-211ENST00000554437 C10orf99Q6UWK7 81 aa1.82□□□□□ -2.12
SCFD1-211ENST00000554437 BAGE2Q86Y30 109 aa1.82□□□□□ -2.12
SCFD1-211ENST00000554437 Q96NJ1 140 aa1.82□□□□□ -2.12
SCFD1-211ENST00000554437 LINC01558Q9Y6Z2 57 aa1.82□□□□□ -2.12
SCFD1-211ENST00000554437 MYOM1P52179 1685 aa1.82□□□□□ -2.12
SCFD1-211ENST00000554437 TET1Q8NFU7 2136 aa1.82□□□□□ -2.12
SCFD1-211ENST00000554437 HMGXB3Q12766 1538 aa1.81□□□□□ -2.12
SCFD1-211ENST00000554437 KIAA0100Q14667 2235 aaKnown RBP1.81□□□□□ -2.12
SCFD1-211ENST00000554437 TRGV1A0A0A0MS02 117 aa1.81□□□□□ -2.12
SCFD1-211ENST00000554437 UQCR11O14957 56 aa1.81□□□□□ -2.12
SCFD1-211ENST00000554437 NMSQ5H8A3 153 aa1.81□□□□□ -2.12
SCFD1-211ENST00000554437 LINC00575Q6W349 94 aa1.81□□□□□ -2.12
SCFD1-211ENST00000554437 KRTAP4-1Q9BYQ7 146 aa1.81□□□□□ -2.12
SCFD1-211ENST00000554437 PARP14Q460N5 1801 aa1.81□□□□□ -2.12
SCFD1-211ENST00000554437 WNK3Q9BYP7 1800 aa1.81□□□□□ -2.12
SCFD1-211ENST00000554437 CLTCQ00610 1675 aaKnown RBP1.8□□□□□ -2.12
SCFD1-211ENST00000554437 COL4A6Q14031 1691 aa1.8□□□□□ -2.12
SCFD1-211ENST00000554437 PSME4Q14997 1843 aa1.8□□□□□ -2.12
SCFD1-211ENST00000554437 TRAV1-2A0A0B4J238 106 aa1.8□□□□□ -2.12
SCFD1-211ENST00000554437 KANTRA0A1W2PQU2 76 aa1.8□□□□□ -2.12
SCFD1-211ENST00000554437 FAM223BA6NKX1 122 aa1.8□□□□□ -2.12
SCFD1-211ENST00000554437 C10orf142B7Z368 130 aa1.8□□□□□ -2.12
SCFD1-211ENST00000554437 ACYP2P14621 99 aa1.8□□□□□ -2.12
SCFD1-211ENST00000554437 SNRPFP62306 86 aaKnown RBP1.8□□□□□ -2.12
SCFD1-211ENST00000554437 NRXN1Q9ULB1 1477 aa1.8□□□□□ -2.12
SCFD1-211ENST00000554437 E9PCH4 1651 aa1.8□□□□□ -2.12
SCFD1-211ENST00000554437 AFDNP55196 1824 aaKnown RBP1.8□□□□□ -2.12
SCFD1-211ENST00000554437 F2Z2F3 143 aa1.79□□□□□ -2.12
SCFD1-211ENST00000554437 WFDC2Q14508 124 aa1.79□□□□□ -2.12
SCFD1-211ENST00000554437 CRCT1Q9UGL9 99 aa1.79□□□□□ -2.12
SCFD1-211ENST00000554437 POLA1P09884 1462 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-211ENST00000554437 CDK13Q14004 1512 aaKnown RBP1.79□□□□□ -2.12
SCFD1-211ENST00000554437 KIF14Q15058 1648 aa1.79□□□□□ -2.12
SCFD1-211ENST00000554437 RGPD4Q7Z3J3 1758 aa1.79□□□□□ -2.12
SCFD1-211ENST00000554437 ARFGEF1Q9Y6D6 1849 aa1.79□□□□□ -2.12
SCFD1-211ENST00000554437 PLXNA1Q9UIW2 1896 aa1.79□□□□□ -2.12
SCFD1-211ENST00000554437 PPLO60437 1756 aa1.78□□□□□ -2.12
SCFD1-211ENST00000554437 ARHGEF5Q12774 1597 aa1.78□□□□□ -2.12
SCFD1-211ENST00000554437 DCAF1Q9Y4B6 1507 aa1.78□□□□□ -2.12
SCFD1-211ENST00000554437 NLRP1Q9C000 1473 aa1.78□□□□□ -2.12
SCFD1-211ENST00000554437 A0A1B0GWA3 101 aa1.78□□□□□ -2.12
SCFD1-211ENST00000554437 SMIM4Q8WVI0 70 aa1.78□□□□□ -2.12
SCFD1-211ENST00000554437 MED12Q93074 2177 aa1.78□□□□□ -2.13
SCFD1-211ENST00000554437 IQSEC2Q5JU85 1478 aa1.77□□□□□ -2.13
SCFD1-211ENST00000554437 F8WEM9 126 aa1.77□□□□□ -2.13
SCFD1-211ENST00000554437 M0R3E3 92 aa1.77□□□□□ -2.13
SCFD1-211ENST00000554437 ACYP1P07311 99 aa1.77□□□□□ -2.13
SCFD1-211ENST00000554437 MGPP08493 103 aa1.77□□□□□ -2.13
SCFD1-211ENST00000554437 CFAP126Q5VTH2 177 aa1.77□□□□□ -2.13
SCFD1-211ENST00000554437 DEFB119Q8N690 84 aa1.77□□□□□ -2.13
SCFD1-211ENST00000554437 TCHHQ07283 1943 aa1.77□□□□□ -2.13
SCFD1-211ENST00000554437 MYO3AQ8NEV4 1616 aa1.77□□□□□ -2.13
SCFD1-211ENST00000554437 INTS1Q8N201 2190 aaKnown RBP1.76□□□□□ -2.13
SCFD1-211ENST00000554437 ESPL1Q14674 2120 aa1.76□□□□□ -2.13
SCFD1-211ENST00000554437 C7orf77A4D0Y5 90 aa1.76□□□□□ -2.13
SCFD1-211ENST00000554437 HMGN2P05204 90 aaKnown RBP1.76□□□□□ -2.13
SCFD1-211ENST00000554437 ZNF137PP52743 207 aa1.76□□□□□ -2.13
SCFD1-211ENST00000554437 COX17Q14061 63 aa1.76□□□□□ -2.13
SCFD1-211ENST00000554437 LINC00643Q86TS7 51 aa1.76□□□□□ -2.13
SCFD1-211ENST00000554437 LINC01600Q96MT4 127 aa1.76□□□□□ -2.13
SCFD1-211ENST00000554437 PRR15LQ9BU68 103 aa1.76□□□□□ -2.13
SCFD1-211ENST00000554437 ABCA4P78363 2273 aa1.76□□□□□ -2.13
SCFD1-211ENST00000554437 PEAK1Q9H792 1746 aa1.76□□□□□ -2.13
SCFD1-211ENST00000554437 ABCC2Q92887 1545 aa1.76□□□□□ -2.13
SCFD1-211ENST00000554437 RGPD3A6NKT7 1758 aaPredicted RBP1.75□□□□□ -2.13
SCFD1-211ENST00000554437 SIPA1L3O60292 1781 aaPredicted RBP1.75□□□□□ -2.13
SCFD1-211ENST00000554437 ARMS2P0C7Q2 107 aa1.75□□□□□ -2.13
SCFD1-211ENST00000554437 IGLC2P0DOY2 106 aa1.75□□□□□ -2.13
SCFD1-211ENST00000554437 IGLC3P0DOY3 106 aa1.75□□□□□ -2.13
SCFD1-211ENST00000554437 HMGN3Q15651 99 aa1.75□□□□□ -2.13
SCFD1-211ENST00000554437 SPINK13Q1W4C9 94 aa1.75□□□□□ -2.13
SCFD1-211ENST00000554437 BVES-AS1Q5T3Y7 98 aa1.75□□□□□ -2.13
SCFD1-211ENST00000554437 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.75□□□□□ -2.13
SCFD1-211ENST00000554437 SMCO4Q9NRQ5 59 aa1.75□□□□□ -2.13
SCFD1-211ENST00000554437 PSENENQ9NZ42 101 aa1.75□□□□□ -2.13
SCFD1-211ENST00000554437 MAP3K4Q9Y6R4 1608 aa1.75□□□□□ -2.13
SCFD1-211ENST00000554437 ZMYM4Q5VZL5 1548 aa1.75□□□□□ -2.13
SCFD1-211ENST00000554437 LOC285556D6RIA3 1793 aa1.75□□□□□ -2.13
SCFD1-211ENST00000554437 COL4A1P02462 1669 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms