RNA–Protein interactions for RNA: ENST00000553889.5

PRKCH-209, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-209ENST00000553889 NAA38Q9BRA0 125 aaKnown RBP6.58□□□□□ -1.36
PRKCH-209ENST00000553889 PRO0461Q9UI25 63 aa6.58□□□□□ -1.36
PRKCH-209ENST00000553889 IGHV3OR16-12A0A075B7B8 117 aa6.57□□□□□ -1.36
PRKCH-209ENST00000553889 SMIM9A6NGZ8 99 aa6.57□□□□□ -1.36
PRKCH-209ENST00000553889 G3V4G9 280 aa6.57□□□□□ -1.36
PRKCH-209ENST00000553889 M0QXV9 152 aa6.57□□□□□ -1.36
PRKCH-209ENST00000553889 LY6G6DO95868 133 aa6.57□□□□□ -1.36
PRKCH-209ENST00000553889 CFC1BP0CG36 223 aa6.57□□□□□ -1.36
PRKCH-209ENST00000553889 CFC1P0CG37 223 aa6.57□□□□□ -1.36
PRKCH-209ENST00000553889 IFITM1P13164 125 aa6.57□□□□□ -1.36
PRKCH-209ENST00000553889 Q6ZUT4 128 aa6.57□□□□□ -1.36
PRKCH-209ENST00000553889 LINC01600Q96MT4 127 aa6.57□□□□□ -1.36
PRKCH-209ENST00000553889 PGPEP1Q9NXJ5 209 aa6.57□□□□□ -1.36
PRKCH-209ENST00000553889 PRO1854Q9UHT4 67 aa6.57□□□□□ -1.36
PRKCH-209ENST00000553889 AKAP9Q99996 3911 aa6.57□□□□□ -1.36
PRKCH-209ENST00000553889 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.56□□□□□ -1.36
PRKCH-209ENST00000553889 IGKV2-29A2NJV5 120 aaPredicted RBP6.56□□□□□ -1.36
PRKCH-209ENST00000553889 TSPAN13O95857 204 aa6.56□□□□□ -1.36
PRKCH-209ENST00000553889 KRTAP10-3P60369 221 aa6.56□□□□□ -1.36
PRKCH-209ENST00000553889 C4orf48Q5BLP8 95 aa6.56□□□□□ -1.36
PRKCH-209ENST00000553889 NTM-AS1Q6ZSK4 140 aa6.56□□□□□ -1.36
PRKCH-209ENST00000553889 DEFB104AQ8WTQ1 72 aa6.56□□□□□ -1.36
PRKCH-209ENST00000553889 NOP10Q9NPE3 64 aaKnown RBP6.56□□□□□ -1.36
PRKCH-209ENST00000553889 CDC42SE2Q9NRR3 84 aa6.56□□□□□ -1.36
PRKCH-209ENST00000553889 NDUFA12Q9UI09 145 aa6.56□□□□□ -1.36
PRKCH-209ENST00000553889 ZNF469Q96JG9 3925 aaPredicted RBP6.56□□□□□ -1.36
PRKCH-209ENST00000553889 NF1P21359 2839 aa6.55□□□□□ -1.36
PRKCH-209ENST00000553889 SETD2Q9BYW2 2564 aaPredicted RBP6.55□□□□□ -1.36
PRKCH-209ENST00000553889 NDUFA1O15239 70 aa6.55□□□□□ -1.36
PRKCH-209ENST00000553889 IGHV3-33P01772 117 aa6.55□□□□□ -1.36
PRKCH-209ENST00000553889 GAGE13Q4V321 117 aa6.55□□□□□ -1.36
PRKCH-209ENST00000553889 LINC00242Q5T6M2 205 aa6.55□□□□□ -1.36
PRKCH-209ENST00000553889 HIST2H2BDQ6DRA6 164 aa6.55□□□□□ -1.36
PRKCH-209ENST00000553889 DGAT2L7PQ6IED9 249 aa6.55□□□□□ -1.36
PRKCH-209ENST00000553889 CEMP1Q6PRD7 247 aaPredicted RBP6.55□□□□□ -1.36
PRKCH-209ENST00000553889 ATP6V0E2Q8NHE4 81 aa6.55□□□□□ -1.36
PRKCH-209ENST00000553889 GEMIN7Q9H840 131 aaKnown RBP6.55□□□□□ -1.36
PRKCH-209ENST00000553889 A4D1N5 150 aa6.54□□□□□ -1.36
PRKCH-209ENST00000553889 WIPF1O43516 503 aa6.54□□□□□ -1.36
PRKCH-209ENST00000553889 FHL2Q14192 279 aa6.54□□□□□ -1.36
PRKCH-209ENST00000553889 MIAQ16674 131 aa6.54□□□□□ -1.36
PRKCH-209ENST00000553889 C9orf66Q5T8R8 295 aa6.54□□□□□ -1.36
PRKCH-209ENST00000553889 TMEM243Q9BU79 118 aa6.54□□□□□ -1.36
PRKCH-209ENST00000553889 FASNP49327 2511 aaKnown RBP6.54□□□□□ -1.36
PRKCH-209ENST00000553889 JMJD1CQ15652 2540 aa6.54□□□□□ -1.36
PRKCH-209ENST00000553889 IGHV3-38A0A0C4DH36 116 aa6.53□□□□□ -1.36
PRKCH-209ENST00000553889 TRBV30A0A0K0K1B3 111 aa6.53□□□□□ -1.36
PRKCH-209ENST00000553889 MUSTN1Q8IVN3 82 aa6.53□□□□□ -1.36
PRKCH-209ENST00000553889 TMEM101Q96IK0 257 aa6.53□□□□□ -1.36
PRKCH-209ENST00000553889 CDKN2A-AS1Q9UH64 79 aa6.53□□□□□ -1.36
PRKCH-209ENST00000553889 SETXQ7Z333 2677 aaKnown RBP6.52□□□□□ -1.37
PRKCH-209ENST00000553889 TRGV2A0A075B6R0 118 aa6.52□□□□□ -1.37
PRKCH-209ENST00000553889 TRAV8-3A0A0A6YYJ7 113 aa6.52□□□□□ -1.37
PRKCH-209ENST00000553889 F5H768 121 aa6.52□□□□□ -1.37
PRKCH-209ENST00000553889 H3BMG7 143 aa6.52□□□□□ -1.37
PRKCH-209ENST00000553889 J3QR89 54 aa6.52□□□□□ -1.37
PRKCH-209ENST00000553889 EIF4EBP3O60516 100 aaPredicted RBP6.52□□□□□ -1.37
PRKCH-209ENST00000553889 PF4P02776 101 aa6.52□□□□□ -1.37
PRKCH-209ENST00000553889 HERV-K104P63124 156 aa6.52□□□□□ -1.37
PRKCH-209ENST00000553889 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.52□□□□□ -1.37
PRKCH-209ENST00000553889 COPS9Q8WXC6 57 aa6.52□□□□□ -1.37
PRKCH-209ENST00000553889 NBPF19A0A087WUL8 3843 aa6.51□□□□□ -1.37
PRKCH-209ENST00000553889 C2CD3Q4AC94 2353 aa6.51□□□□□ -1.37
PRKCH-209ENST00000553889 TRBV6-8A0A0A6YYG3 113 aa6.51□□□□□ -1.37
PRKCH-209ENST00000553889 LYRM9A8MSI8 78 aa6.51□□□□□ -1.37
PRKCH-209ENST00000553889 SMIM1B2RUZ4 78 aa6.51□□□□□ -1.37
PRKCH-209ENST00000553889 GAGE7O76087 117 aa6.51□□□□□ -1.37
PRKCH-209ENST00000553889 APOMO95445 188 aa6.51□□□□□ -1.37
PRKCH-209ENST00000553889 GAGE12FP0CL80 117 aa6.51□□□□□ -1.37
PRKCH-209ENST00000553889 GAGE12GP0CL81 117 aa6.51□□□□□ -1.37
PRKCH-209ENST00000553889 GAGE12IP0CL82 117 aa6.51□□□□□ -1.37
PRKCH-209ENST00000553889 RPL35AP18077 110 aaKnown RBP6.51□□□□□ -1.37
PRKCH-209ENST00000553889 WFDC2Q14508 124 aa6.51□□□□□ -1.37
PRKCH-209ENST00000553889 WFDC9Q8NEX5 89 aa6.51□□□□□ -1.37
PRKCH-209ENST00000553889 ZNF625Q96I27 306 aaPredicted RBP6.51□□□□□ -1.37
PRKCH-209ENST00000553889 WFDC10AQ9H1F0 79 aa6.51□□□□□ -1.37
PRKCH-209ENST00000553889 ERG28Q9UKR5 140 aa6.51□□□□□ -1.37
PRKCH-209ENST00000553889 X6R8D5 127 aa6.51□□□□□ -1.37
PRKCH-209ENST00000553889 NOTCH3Q9UM47 2321 aa6.51□□□□□ -1.37
PRKCH-209ENST00000553889 TEX48A0A1B0GUV7 120 aa6.5□□□□□ -1.37
PRKCH-209ENST00000553889 GAGE12JA6NER3 117 aa6.5□□□□□ -1.37
PRKCH-209ENST00000553889 SPINK8P0C7L1 97 aa6.5□□□□□ -1.37
PRKCH-209ENST00000553889 COX6A2Q02221 97 aa6.5□□□□□ -1.37
PRKCH-209ENST00000553889 GAGE4Q13068 117 aa6.5□□□□□ -1.37
PRKCH-209ENST00000553889 GAGE5Q13069 117 aa6.5□□□□□ -1.37
PRKCH-209ENST00000553889 CIRBPQ14011 172 aaKnown RBP6.5□□□□□ -1.37
PRKCH-209ENST00000553889 RNASE13Q5GAN3 156 aaKnown RBP6.5□□□□□ -1.37
PRKCH-209ENST00000553889 ADAMTSL4-AS1Q5T5F5 129 aa6.5□□□□□ -1.37
PRKCH-209ENST00000553889 LINC01561Q8N1V8 128 aa6.5□□□□□ -1.37
PRKCH-209ENST00000553889 CITED1Q99966 193 aa6.5□□□□□ -1.37
PRKCH-209ENST00000553889 TRGV4A0A0C4DH28 118 aa6.49□□□□□ -1.37
PRKCH-209ENST00000553889 A0A1B0GUV1 79 aa6.49□□□□□ -1.37
PRKCH-209ENST00000553889 CRLF1O75462 422 aa6.49□□□□□ -1.37
PRKCH-209ENST00000553889 SMCPP49901 116 aaPredicted RBP6.49□□□□□ -1.37
PRKCH-209ENST00000553889 SMR3AQ99954 134 aa6.49□□□□□ -1.37
PRKCH-209ENST00000553889 VPS25Q9BRG1 176 aa6.49□□□□□ -1.37
PRKCH-209ENST00000553889 IGHV3-64A0A075B6Q5 118 aa6.48□□□□□ -1.37
PRKCH-209ENST00000553889 LOC107984156A0A0G2JMH3 177 aa6.48□□□□□ -1.37
PRKCH-209ENST00000553889 UBE2L6O14933 153 aa6.48□□□□□ -1.37
PRKCH-209ENST00000553889 TCL1BO95988 128 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms