RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 K7EQD1 137 aa9.05□□□□□ -0.96
VIPAS39-206ENST00000553888 GAGE4Q13068 117 aa9.05□□□□□ -0.96
VIPAS39-206ENST00000553888 GAGE13Q4V321 117 aa9.05□□□□□ -0.96
VIPAS39-206ENST00000553888 C4orf48Q5BLP8 95 aa9.05□□□□□ -0.96
VIPAS39-206ENST00000553888 FAM104AQ969W3 186 aa9.05□□□□□ -0.96
VIPAS39-206ENST00000553888 OVOL2Q9BRP0 275 aa9.05□□□□□ -0.96
VIPAS39-206ENST00000553888 CHCHD7Q9BUK0 85 aa9.05□□□□□ -0.96
VIPAS39-206ENST00000553888 IGLV4-69A0A075B6H9 119 aa9.05□□□□□ -0.96
VIPAS39-206ENST00000553888 IGHV4-30-4P0DP06 118 aa9.04□□□□□ -0.96
VIPAS39-206ENST00000553888 MRAPQ8TCY5 172 aa9.04□□□□□ -0.96
VIPAS39-206ENST00000553888 C11orf86A6NJI1 115 aa9.04□□□□□ -0.96
VIPAS39-206ENST00000553888 TIMM17AQ99595 171 aa9.04□□□□□ -0.96
VIPAS39-206ENST00000553888 ANAPC13Q9BS18 74 aa9.04□□□□□ -0.96
VIPAS39-206ENST00000553888 MPV17L2Q567V2 206 aa9.04□□□□□ -0.96
VIPAS39-206ENST00000553888 MRPS16Q9Y3D3 137 aaKnown RBP9.04□□□□□ -0.96
VIPAS39-206ENST00000553888 TRBV7-3A0A075B6L6 115 aa9.03□□□□□ -0.96
VIPAS39-206ENST00000553888 PLNP26678 52 aa9.03□□□□□ -0.96
VIPAS39-206ENST00000553888 PMVKQ15126 192 aa9.03□□□□□ -0.96
VIPAS39-206ENST00000553888 NOTCH1P46531 2555 aa9.03□□□□□ -0.96
VIPAS39-206ENST00000553888 IGLV4-3A0A075B6K6 122 aa9.03□□□□□ -0.96
VIPAS39-206ENST00000553888 TMEM141Q96I45 108 aa9.03□□□□□ -0.96
VIPAS39-206ENST00000553888 V9GYY9 64 aa9.03□□□□□ -0.96
VIPAS39-206ENST00000553888 TRAV8-6A0A0B4J262 113 aa9.02□□□□□ -0.96
VIPAS39-206ENST00000553888 TRGV4A0A0C4DH28 118 aa9.02□□□□□ -0.96
VIPAS39-206ENST00000553888 MAPKAPK5-AS1Q8N8E1 139 aa9.02□□□□□ -0.96
VIPAS39-206ENST00000553888 DNAJC30Q96LL9 226 aa9.02□□□□□ -0.96
VIPAS39-206ENST00000553888 FHL2Q14192 279 aa9.02□□□□□ -0.97
VIPAS39-206ENST00000553888 NTM-AS1Q6ZSK4 140 aa9.02□□□□□ -0.97
VIPAS39-206ENST00000553888 LINC00694P0DN24 101 aa9.01□□□□□ -0.97
VIPAS39-206ENST00000553888 FAM222AQ5U5X8 452 aa9.01□□□□□ -0.97
VIPAS39-206ENST00000553888 DNAH3Q8TD57 4116 aa9.01□□□□□ -0.97
VIPAS39-206ENST00000553888 RPL36AP83881 106 aaKnown RBP9.01□□□□□ -0.97
VIPAS39-206ENST00000553888 RPL36ALQ969Q0 106 aaKnown RBP9.01□□□□□ -0.97
VIPAS39-206ENST00000553888 IGHV4-28A0A0C4DH34 117 aa9□□□□□ -0.97
VIPAS39-206ENST00000553888 APOC4P55056 127 aa9□□□□□ -0.97
VIPAS39-206ENST00000553888 UBE2D4Q9Y2X8 147 aa9□□□□□ -0.97
VIPAS39-206ENST00000553888 UBE2D3P61077 147 aa9□□□□□ -0.97
VIPAS39-206ENST00000553888 UBE2D2P62837 147 aa9□□□□□ -0.97
VIPAS39-206ENST00000553888 Q6ZUT4 128 aa9□□□□□ -0.97
VIPAS39-206ENST00000553888 A0A0J9YXV3 536 aa8.99□□□□□ -0.97
VIPAS39-206ENST00000553888 RETNQ9HD89 108 aa8.99□□□□□ -0.97
VIPAS39-206ENST00000553888 CELA1Q9UNI1 258 aa8.99□□□□□ -0.97
VIPAS39-206ENST00000553888 TRBV10-1A0A0K0K1A3 114 aa8.98□□□□□ -0.97
VIPAS39-206ENST00000553888 TMEM170BQ5T4T1 132 aa8.98□□□□□ -0.97
VIPAS39-206ENST00000553888 TENM3Q9P273 2699 aa8.98□□□□□ -0.97
VIPAS39-206ENST00000553888 LOC107984640A0A0U1RRK4 108 aa8.98□□□□□ -0.97
VIPAS39-206ENST00000553888 CHAC1Q9BUX1 264 aa8.98□□□□□ -0.97
VIPAS39-206ENST00000553888 IGHV3-64A0A075B6Q5 118 aa8.98□□□□□ -0.97
VIPAS39-206ENST00000553888 RPL24P83731 157 aaKnown RBP8.98□□□□□ -0.97
VIPAS39-206ENST00000553888 BVES-AS1Q5T3Y7 98 aa8.98□□□□□ -0.97
VIPAS39-206ENST00000553888 PRADC1Q9BSG0 188 aa8.98□□□□□ -0.97
VIPAS39-206ENST00000553888 TINCRA0A1B0GVN0 87 aa8.97□□□□□ -0.97
VIPAS39-206ENST00000553888 LINC01549A6NIU2 74 aa8.97□□□□□ -0.97
VIPAS39-206ENST00000553888 LINC00612Q8N6U2 182 aa8.97□□□□□ -0.97
VIPAS39-206ENST00000553888 TRBV6-4A0A1B0GX49 114 aa8.97□□□□□ -0.97
VIPAS39-206ENST00000553888 Q8NAQ8 132 aa8.97□□□□□ -0.97
VIPAS39-206ENST00000553888 TRBV25-1A0A075B6N4 114 aa8.96□□□□□ -0.97
VIPAS39-206ENST00000553888 A0A096LPF7 62 aa8.96□□□□□ -0.97
VIPAS39-206ENST00000553888 PRB2P02812 416 aaPredicted RBP8.96□□□□□ -0.97
VIPAS39-206ENST00000553888 PKIGQ9Y2B9 76 aa8.96□□□□□ -0.97
VIPAS39-206ENST00000553888 PYGO1Q9Y3Y4 419 aa8.96□□□□□ -0.97
VIPAS39-206ENST00000553888 TSPEAR-AS2P59090 65 aa8.96□□□□□ -0.98
VIPAS39-206ENST00000553888 AMELXQ99217 191 aa8.96□□□□□ -0.98
VIPAS39-206ENST00000553888 NBEAL1Q6ZS30 2694 aa8.95□□□□□ -0.98
VIPAS39-206ENST00000553888 FAM19A5Q7Z5A7 132 aaPredicted RBP8.95□□□□□ -0.98
VIPAS39-206ENST00000553888 DAZ4Q86SG3 579 aaKnown RBP8.95□□□□□ -0.98
VIPAS39-206ENST00000553888 DAZ3Q9NR90 486 aaKnown RBP8.95□□□□□ -0.98
VIPAS39-206ENST00000553888 A0A0J9YY99 117 aa8.94□□□□□ -0.98
VIPAS39-206ENST00000553888 TEX48A0A1B0GUV7 120 aa8.94□□□□□ -0.98
VIPAS39-206ENST00000553888 E9PLD3 99 aa8.94□□□□□ -0.98
VIPAS39-206ENST00000553888 CCDC179H3BU77 68 aa8.94□□□□□ -0.98
VIPAS39-206ENST00000553888 TAX1BP3O14907 124 aa8.94□□□□□ -0.98
VIPAS39-206ENST00000553888 ZNF22P17026 224 aaPredicted RBP8.94□□□□□ -0.98
VIPAS39-206ENST00000553888 TMEM97Q5BJF2 176 aa8.94□□□□□ -0.98
VIPAS39-206ENST00000553888 A8MZ25 164 aa8.94□□□□□ -0.98
VIPAS39-206ENST00000553888 SPANXA1Q9NS26 97 aa8.94□□□□□ -0.98
VIPAS39-206ENST00000553888 GYPEP15421 78 aa8.94□□□□□ -0.98
VIPAS39-206ENST00000553888 EGFEM1PQ0D2K5 195 aa8.94□□□□□ -0.98
VIPAS39-206ENST00000553888 SBSPONQ8IVN8 264 aa8.94□□□□□ -0.98
VIPAS39-206ENST00000553888 SPATA25Q9BR10 227 aa8.94□□□□□ -0.98
VIPAS39-206ENST00000553888 GAGE10A6NGK3 116 aa8.93□□□□□ -0.98
VIPAS39-206ENST00000553888 NFE4Q86UQ8 179 aa8.93□□□□□ -0.98
VIPAS39-206ENST00000553888 PLEKHB2Q96CS7 222 aa8.93□□□□□ -0.98
VIPAS39-206ENST00000553888 DGAT2L7PQ6IED9 249 aa8.93□□□□□ -0.98
VIPAS39-206ENST00000553888 HTN3P15516 51 aa8.92□□□□□ -0.98
VIPAS39-206ENST00000553888 TRAV8-3A0A0A6YYJ7 113 aa8.91□□□□□ -0.98
VIPAS39-206ENST00000553888 MYMXA0A1B0GTQ4 84 aa8.91□□□□□ -0.98
VIPAS39-206ENST00000553888 ZNF815PA8K554 130 aa8.91□□□□□ -0.98
VIPAS39-206ENST00000553888 LYRM9A8MSI8 78 aa8.91□□□□□ -0.98
VIPAS39-206ENST00000553888 DAD1P61803 113 aa8.91□□□□□ -0.98
VIPAS39-206ENST00000553888 C4orf26Q17RF5 130 aa8.91□□□□□ -0.98
VIPAS39-206ENST00000553888 TMEM223A0PJW6 202 aa8.91□□□□□ -0.98
VIPAS39-206ENST00000553888 MIFP14174 115 aa8.91□□□□□ -0.98
VIPAS39-206ENST00000553888 PAPPA-AS1Q5QFB9 102 aa8.91□□□□□ -0.98
VIPAS39-206ENST00000553888 SPINK8P0C7L1 97 aa8.91□□□□□ -0.98
VIPAS39-206ENST00000553888 COX6A2Q02221 97 aa8.91□□□□□ -0.98
VIPAS39-206ENST00000553888 TMEM243Q9BU79 118 aa8.91□□□□□ -0.98
VIPAS39-206ENST00000553888 GCSHP23434 173 aa8.9□□□□□ -0.98
VIPAS39-206ENST00000553888 MRPS36P82909 103 aaKnown RBP8.9□□□□□ -0.98
VIPAS39-206ENST00000553888 VSIG2Q96IQ7 327 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms